RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 SPATA8Q6RVD6 105 aa5.41□□□□□ -1.54
SCAMP3-208ENST00000490999 MT1LQ93083 61 aa5.4□□□□□ -1.54
SCAMP3-208ENST00000490999 A0A1B0GU69 56 aa5.38□□□□□ -1.55
SCAMP3-208ENST00000490999 SPINT4Q6UDR6 99 aa5.36□□□□□ -1.55
SCAMP3-208ENST00000490999 SMIM26A0A096LP01 95 aa5.35□□□□□ -1.55
SCAMP3-208ENST00000490999 CCDC179H3BU77 68 aa5.34□□□□□ -1.55
SCAMP3-208ENST00000490999 PRR15LQ9BU68 103 aa5.34□□□□□ -1.55
SCAMP3-208ENST00000490999 KRTAP12-1P59990 96 aa5.33□□□□□ -1.56
SCAMP3-208ENST00000490999 KRTAP20-2Q3LI61 65 aa5.27□□□□□ -1.57
SCAMP3-208ENST00000490999 TMEM258P61165 79 aa5.22□□□□□ -1.57
SCAMP3-208ENST00000490999 LINC01558Q9Y6Z2 57 aa5.21□□□□□ -1.58
SCAMP3-208ENST00000490999 A8MU10 97 aa5.2□□□□□ -1.58
SCAMP3-208ENST00000490999 KRTAP4-7Q9BYR0 210 aa5.18□□□□□ -1.58
SCAMP3-208ENST00000490999 C10orf95Q9H7T3 257 aa5.18□□□□□ -1.58
SCAMP3-208ENST00000490999 LCE3AQ5TA76 89 aa5.14□□□□□ -1.59
SCAMP3-208ENST00000490999 SYNE1Q8NF91 8797 aaKnown RBP5.13□□□□□ -1.59
SCAMP3-208ENST00000490999 TNP1P09430 55 aa5.11□□□□□ -1.59
SCAMP3-208ENST00000490999 UQCR11O14957 56 aa5.1□□□□□ -1.59
SCAMP3-208ENST00000490999 KRTAP5-5Q701N2 237 aaPredicted RBP5.09□□□□□ -1.59
SCAMP3-208ENST00000490999 AHNAKQ09666 5890 aaKnown RBP5.08□□□□□ -1.6
SCAMP3-208ENST00000490999 V9GYY9 64 aa5.05□□□□□ -1.6
SCAMP3-208ENST00000490999 KRTAP12-4P60329 112 aa5.03□□□□□ -1.6
SCAMP3-208ENST00000490999 MUC5ACP98088 5654 aa5.02□□□□□ -1.61
SCAMP3-208ENST00000490999 K7ERS5 55 aa5.01□□□□□ -1.61
SCAMP3-208ENST00000490999 MUC5BQ9HC84 5762 aaPredicted RBP5□□□□□ -1.61
SCAMP3-208ENST00000490999 KRTAP23-1A1A580 65 aa5□□□□□ -1.61
SCAMP3-208ENST00000490999 MIR22HGQ0VDD5 57 aa4.95□□□□□ -1.62
SCAMP3-208ENST00000490999 LOC100996750A0A140TA64 210 aa4.94□□□□□ -1.62
SCAMP3-208ENST00000490999 KRTAP4-11Q9BYQ6 195 aa4.92□□□□□ -1.62
SCAMP3-208ENST00000490999 PCP4P48539 62 aa4.91□□□□□ -1.62
SCAMP3-208ENST00000490999 KRTAP12-3P60328 96 aa4.9□□□□□ -1.63
SCAMP3-208ENST00000490999 Q1T7F1 81 aa4.89□□□□□ -1.63
SCAMP3-208ENST00000490999 KRTAP25-1Q3LHN0 102 aa4.86□□□□□ -1.63
SCAMP3-208ENST00000490999 PSPHP1O15172 72 aa4.84□□□□□ -1.63
SCAMP3-208ENST00000490999 KRTAP5-8O75690 187 aa4.8□□□□□ -1.64
SCAMP3-208ENST00000490999 A0A0A0MQY5 61 aa4.75□□□□□ -1.65
SCAMP3-208ENST00000490999 A6NED7 52 aa4.74□□□□□ -1.65
SCAMP3-208ENST00000490999 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
SCAMP3-208ENST00000490999 KRTAP5-2Q701N4 177 aa4.74□□□□□ -1.65
SCAMP3-208ENST00000490999 RPS28P62857 69 aaKnown RBP4.72□□□□□ -1.65
SCAMP3-208ENST00000490999 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
SCAMP3-208ENST00000490999 CDC42SE1Q9NRR8 79 aa4.65□□□□□ -1.67
SCAMP3-208ENST00000490999 KRTAP6-1Q3LI64 71 aa4.62□□□□□ -1.67
SCAMP3-208ENST00000490999 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
SCAMP3-208ENST00000490999 MT1AP04731 61 aa4.57□□□□□ -1.68
SCAMP3-208ENST00000490999 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
SCAMP3-208ENST00000490999 ROMO1P60602 79 aa4.54□□□□□ -1.68
SCAMP3-208ENST00000490999 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
SCAMP3-208ENST00000490999 LCE3CQ5T5A8 94 aa4.47□□□□□ -1.69
SCAMP3-208ENST00000490999 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
SCAMP3-208ENST00000490999 KRTAP9-4Q9BYQ2 154 aa4.44□□□□□ -1.7
SCAMP3-208ENST00000490999 KRTAP5-1Q6L8H4 278 aa4.35□□□□□ -1.71
SCAMP3-208ENST00000490999 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
SCAMP3-208ENST00000490999 MT3P25713 68 aa4.17□□□□□ -1.74
SCAMP3-208ENST00000490999 BRK1Q8WUW1 75 aa4.12□□□□□ -1.75
SCAMP3-208ENST00000490999 PRAC1Q96KF2 57 aa3.92□□□□□ -1.78
SCAMP3-208ENST00000490999 PMAIP1Q13794 54 aa3.91□□□□□ -1.78
SCAMP3-208ENST00000490999 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
SCAMP3-208ENST00000490999 LCE1BQ5T7P3 118 aa3.85□□□□□ -1.79
SCAMP3-208ENST00000490999 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
SCAMP3-208ENST00000490999 PRO0628Q9UI54 55 aa3.78□□□□□ -1.8
SCAMP3-208ENST00000490999 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
SCAMP3-208ENST00000490999 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
SCAMP3-208ENST00000490999 KTN1-AS1Q86SY8 53 aa3.49□□□□□ -1.85
SCAMP3-208ENST00000490999 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
SCAMP3-208ENST00000490999 PHGR1C9JFL3 82 aa3.38□□□□□ -1.87
SCAMP3-208ENST00000490999 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
SCAMP3-208ENST00000490999 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
SCAMP3-208ENST00000490999 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
SCAMP3-208ENST00000490999 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
SCAMP3-208ENST00000490999 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
SCAMP3-208ENST00000490999 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
SCAMP3-208ENST00000490999 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
SCAMP3-208ENST00000490999 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
SCAMP3-208ENST00000490999 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
SCAMP3-208ENST00000490999 INE1O15225 51 aa2.35□□□□□ -2.03
SCAMP3-208ENST00000490999 PRM1P04553 51 aa2.28□□□□□ -2.04
SCAMP3-208ENST00000490999 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 61.9 ms