RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.8
HDAC9-225ENST00000490851 FCGBPQ9Y6R7 5405 aaPredicted RBP3.84□□□□□ -1.8
HDAC9-225ENST00000490851 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
HDAC9-225ENST00000490851 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
HDAC9-225ENST00000490851 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.81
HDAC9-225ENST00000490851 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
HDAC9-225ENST00000490851 LCE1DQ5T752 114 aa3.74□□□□□ -1.81
HDAC9-225ENST00000490851 KRTAP19-7Q3SYF9 63 aa3.69□□□□□ -1.82
HDAC9-225ENST00000490851 CRCT1Q9UGL9 99 aa3.68□□□□□ -1.82
HDAC9-225ENST00000490851 MACF1Q9UPN3 7388 aaKnown RBP3.67□□□□□ -1.82
HDAC9-225ENST00000490851 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
HDAC9-225ENST00000490851 MT1EP04732 61 aa3.62□□□□□ -1.83
HDAC9-225ENST00000490851 MUC12Q9UKN1 5478 aa3.61□□□□□ -1.83
HDAC9-225ENST00000490851 SYNE2Q8WXH0 6885 aaKnown RBP3.6□□□□□ -1.83
HDAC9-225ENST00000490851 MT1LQ93083 61 aa3.56□□□□□ -1.84
HDAC9-225ENST00000490851 LCE3CQ5T5A8 94 aa3.55□□□□□ -1.84
HDAC9-225ENST00000490851 SPRR2FQ96RM1 72 aa3.55□□□□□ -1.84
HDAC9-225ENST00000490851 MDN1Q9NU22 5596 aa3.46□□□□□ -1.86
HDAC9-225ENST00000490851 KRTAP19-3Q7Z4W3 81 aa3.45□□□□□ -1.86
HDAC9-225ENST00000490851 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
HDAC9-225ENST00000490851 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
HDAC9-225ENST00000490851 HMCN1Q96RW7 5635 aa3.43□□□□□ -1.86
HDAC9-225ENST00000490851 LCE5AQ5TCM9 118 aa3.42□□□□□ -1.86
HDAC9-225ENST00000490851 KRTAP9-6A8MVA2 160 aa3.41□□□□□ -1.86
HDAC9-225ENST00000490851 MT1MQ8N339 61 aa3.41□□□□□ -1.86
HDAC9-225ENST00000490851 MT1GP13640 62 aa3.4□□□□□ -1.86
HDAC9-225ENST00000490851 KRTAP6-3Q3LI67 103 aa3.4□□□□□ -1.86
HDAC9-225ENST00000490851 LCE1AQ5T7P2 110 aa3.4□□□□□ -1.87
HDAC9-225ENST00000490851 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
HDAC9-225ENST00000490851 KRTAP19-4Q3LI73 84 aa3.38□□□□□ -1.87
HDAC9-225ENST00000490851 DSTQ03001 7570 aaKnown RBP3.37□□□□□ -1.87
HDAC9-225ENST00000490851 SPRR2EP22531 72 aa3.34□□□□□ -1.87
HDAC9-225ENST00000490851 SPRR2BP35325 72 aa3.34□□□□□ -1.87
HDAC9-225ENST00000490851 SPRR2AP35326 72 aa3.34□□□□□ -1.87
HDAC9-225ENST00000490851 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
HDAC9-225ENST00000490851 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
HDAC9-225ENST00000490851 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
HDAC9-225ENST00000490851 KRTAP12-4P60329 112 aa3.27□□□□□ -1.89
HDAC9-225ENST00000490851 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
HDAC9-225ENST00000490851 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
HDAC9-225ENST00000490851 SPRR2DP22532 72 aa3.21□□□□□ -1.9
HDAC9-225ENST00000490851 KRTAP9-7A8MTY7 169 aa3.2□□□□□ -1.9
HDAC9-225ENST00000490851 NEBP20929 6669 aa3.15□□□□□ -1.91
HDAC9-225ENST00000490851 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
HDAC9-225ENST00000490851 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
HDAC9-225ENST00000490851 MT1AP04731 61 aa2.99□□□□□ -1.93
HDAC9-225ENST00000490851 MT3P25713 68 aa2.99□□□□□ -1.93
HDAC9-225ENST00000490851 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
HDAC9-225ENST00000490851 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
HDAC9-225ENST00000490851 MT4P47944 62 aa2.83□□□□□ -1.96
HDAC9-225ENST00000490851 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
HDAC9-225ENST00000490851 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
HDAC9-225ENST00000490851 PRM1P04553 51 aa2.8□□□□□ -1.96
HDAC9-225ENST00000490851 KRTAP6-2Q3LI66 62 aa2.78□□□□□ -1.96
HDAC9-225ENST00000490851 LCE4AQ5TA78 99 aa2.76□□□□□ -1.97
HDAC9-225ENST00000490851 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
HDAC9-225ENST00000490851 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
HDAC9-225ENST00000490851 KRTAP20-2Q3LI61 65 aa2.7□□□□□ -1.98
HDAC9-225ENST00000490851 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
HDAC9-225ENST00000490851 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
HDAC9-225ENST00000490851 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
HDAC9-225ENST00000490851 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
HDAC9-225ENST00000490851 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
HDAC9-225ENST00000490851 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
HDAC9-225ENST00000490851 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
HDAC9-225ENST00000490851 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.04
HDAC9-225ENST00000490851 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
HDAC9-225ENST00000490851 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
HDAC9-225ENST00000490851 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
HDAC9-225ENST00000490851 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
HDAC9-225ENST00000490851 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
HDAC9-225ENST00000490851 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
HDAC9-225ENST00000490851 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
HDAC9-225ENST00000490851 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
HDAC9-225ENST00000490851 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
HDAC9-225ENST00000490851 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
HDAC9-225ENST00000490851 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
HDAC9-225ENST00000490851 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 57.3 ms