RNA–Protein interactions for RNA: ENST00000490527.1

USP34-217, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 560 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-217ENST00000490527 FAT4Q6V0I7 4981 aa1.61□□□□□ -2.15
USP34-217ENST00000490527 TOMM7Q9P0U1 55 aa1.61□□□□□ -2.15
USP34-217ENST00000490527 CDKN2A-AS1Q9UH64 79 aa1.61□□□□□ -2.15
USP34-217ENST00000490527 K7EQZ3 153 aa1.6□□□□□ -2.15
USP34-217ENST00000490527 MUC17Q685J3 4493 aa1.6□□□□□ -2.15
USP34-217ENST00000490527 A0A0D9SG42 100 aa1.58□□□□□ -2.16
USP34-217ENST00000490527 PRLHP81277 87 aa1.57□□□□□ -2.16
USP34-217ENST00000490527 MRPL34Q9BQ48 92 aaKnown RBP1.56□□□□□ -2.16
USP34-217ENST00000490527 H0YAA0 97 aa1.54□□□□□ -2.16
USP34-217ENST00000490527 COX6B2Q6YFQ2 88 aa1.54□□□□□ -2.16
USP34-217ENST00000490527 FSIP2Q5CZC0 6907 aa1.53□□□□□ -2.17
USP34-217ENST00000490527 IGLV5-48A0A075B6I7 105 aa1.51□□□□□ -2.17
USP34-217ENST00000490527 SPRR1AP35321 89 aa1.51□□□□□ -2.17
USP34-217ENST00000490527 KRTAP19-2Q3LHN2 52 aa1.49□□□□□ -2.17
USP34-217ENST00000490527 WFDC13Q8IUB5 93 aa1.49□□□□□ -2.17
USP34-217ENST00000490527 C9orf92A6NGG3 77 aa1.48□□□□□ -2.17
USP34-217ENST00000490527 DEFB105AQ8NG35 78 aa1.48□□□□□ -2.17
USP34-217ENST00000490527 SPINK1P00995 79 aa1.47□□□□□ -2.17
USP34-217ENST00000490527 USH2AO75445 5202 aa1.46□□□□□ -2.18
USP34-217ENST00000490527 MT1HP80294 61 aa1.46□□□□□ -2.18
USP34-217ENST00000490527 FLGP20930 4061 aaPredicted RBP1.46□□□□□ -2.18
USP34-217ENST00000490527 SSPOA2VEC9 5147 aa1.45□□□□□ -2.18
USP34-217ENST00000490527 MMP24-AS1A0A0U1RRL7 71 aa1.45□□□□□ -2.18
USP34-217ENST00000490527 SPRR1BP22528 89 aa1.45□□□□□ -2.18
USP34-217ENST00000490527 H1FX-AS1Q4G0G2 97 aa1.44□□□□□ -2.18
USP34-217ENST00000490527 RPS29P62273 56 aaKnown RBP1.43□□□□□ -2.18
USP34-217ENST00000490527 M0R2T5 61 aa1.41□□□□□ -2.18
USP34-217ENST00000490527 HMCN1Q96RW7 5635 aa1.37□□□□□ -2.19
USP34-217ENST00000490527 SYNE2Q8WXH0 6885 aaKnown RBP1.37□□□□□ -2.19
USP34-217ENST00000490527 MT2AP02795 61 aa1.36□□□□□ -2.19
USP34-217ENST00000490527 MT1FP04733 61 aa1.36□□□□□ -2.19
USP34-217ENST00000490527 MACF1Q9UPN3 7388 aaKnown RBP1.34□□□□□ -2.19
USP34-217ENST00000490527 S4R3F8 94 aa1.31□□□□□ -2.2
USP34-217ENST00000490527 NEBP20929 6669 aa1.28□□□□□ -2.2
USP34-217ENST00000490527 MUC12Q9UKN1 5478 aa1.28□□□□□ -2.2
USP34-217ENST00000490527 KRTAP19-6Q3LI70 58 aa1.27□□□□□ -2.21
USP34-217ENST00000490527 MDN1Q9NU22 5596 aa1.26□□□□□ -2.21
USP34-217ENST00000490527 KMT2DO14686 5537 aa1.23□□□□□ -2.21
USP34-217ENST00000490527 MT1BP07438 61 aa1.23□□□□□ -2.21
USP34-217ENST00000490527 KRTAP19-8Q3LI54 63 aa1.19□□□□□ -2.22
USP34-217ENST00000490527 SPRR2GQ9BYE4 73 aa1.18□□□□□ -2.22
USP34-217ENST00000490527 KRTAP20-1Q3LI63 56 aa1.16□□□□□ -2.22
USP34-217ENST00000490527 MT1XP80297 61 aa1.14□□□□□ -2.23
USP34-217ENST00000490527 M0QZ58 72 aa1.13□□□□□ -2.23
USP34-217ENST00000490527 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
USP34-217ENST00000490527 SPRR2FQ96RM1 72 aa1.13□□□□□ -2.23
USP34-217ENST00000490527 KRTAP2-3P0C7H8 128 aa1.12□□□□□ -2.23
USP34-217ENST00000490527 SPRR2EP22531 72 aa1.12□□□□□ -2.23
USP34-217ENST00000490527 SPRR2BP35325 72 aa1.12□□□□□ -2.23
USP34-217ENST00000490527 SPRR2AP35326 72 aa1.12□□□□□ -2.23
USP34-217ENST00000490527 KRTAP2-4Q9BYR9 128 aa1.12□□□□□ -2.23
USP34-217ENST00000490527 KRTAP19-3Q7Z4W3 81 aa1.1□□□□□ -2.23
USP34-217ENST00000490527 KRTAP8-1Q8IUC2 63 aa1.1□□□□□ -2.23
USP34-217ENST00000490527 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
USP34-217ENST00000490527 GPR98Q8WXG9 6306 aa1.09□□□□□ -2.24
USP34-217ENST00000490527 SPRR2DP22532 72 aa1.08□□□□□ -2.24
USP34-217ENST00000490527 KRTAP2-1Q9BYU5 128 aa1.08□□□□□ -2.24
USP34-217ENST00000490527 DSTQ03001 7570 aaKnown RBP1.07□□□□□ -2.24
USP34-217ENST00000490527 TNP1P09430 55 aa1.02□□□□□ -2.25
USP34-217ENST00000490527 KRTAP19-7Q3SYF9 63 aa1.02□□□□□ -2.25
USP34-217ENST00000490527 MT1EP04732 61 aa1.01□□□□□ -2.25
USP34-217ENST00000490527 AHNAK2Q8IVF2 5795 aa1.01□□□□□ -2.25
USP34-217ENST00000490527 KRTAP19-5Q3LI72 72 aa1□□□□□ -2.25
USP34-217ENST00000490527 MT4P47944 62 aa0.98□□□□□ -2.25
USP34-217ENST00000490527 MT1MQ8N339 61 aa0.96□□□□□ -2.26
USP34-217ENST00000490527 MT1LQ93083 61 aa0.96□□□□□ -2.26
USP34-217ENST00000490527 MT1GP13640 62 aa0.94□□□□□ -2.26
USP34-217ENST00000490527 PRM1P04553 51 aa0.89□□□□□ -2.27
USP34-217ENST00000490527 SYNE1Q8NF91 8797 aaKnown RBP0.88□□□□□ -2.27
USP34-217ENST00000490527 KRTAP20-2Q3LI61 65 aa0.88□□□□□ -2.27
USP34-217ENST00000490527 AHNAKQ09666 5890 aaKnown RBP0.86□□□□□ -2.27
USP34-217ENST00000490527 MUC5BQ9HC84 5762 aaPredicted RBP0.84□□□□□ -2.27
USP34-217ENST00000490527 KRTAP6-1Q3LI64 71 aa0.83□□□□□ -2.28
USP34-217ENST00000490527 MT1AP04731 61 aa0.8□□□□□ -2.28
USP34-217ENST00000490527 KRTAP6-2Q3LI66 62 aa0.8□□□□□ -2.28
USP34-217ENST00000490527 MUC5ACP98088 5654 aa0.8□□□□□ -2.28
USP34-217ENST00000490527 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
USP34-217ENST00000490527 PHGR1C9JFL3 82 aa0.55□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms