RNA–Protein interactions for RNA: ENST00000490527.1

USP34-217, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 560 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-217ENST00000490527 AEBP2Q6ZN18 517 aaPredicted RBP28.56■■■□□ 2.16
USP34-217ENST00000490527 CHIC1Q5VXU3 224 aa27.99■■■□□ 2.07
USP34-217ENST00000490527 PHF23Q9BUL5 403 aaPredicted RBP24.72■■□□□ 1.55
USP34-217ENST00000490527 SENP3Q9H4L4 574 aaPredicted RBP24.07■■□□□ 1.44
USP34-217ENST00000490527 PLPPR3Q6T4P5 718 aa22.75■■□□□ 1.23
USP34-217ENST00000490527 FOXD1Q16676 465 aa22.41■■□□□ 1.18
USP34-217ENST00000490527 PPP6R1Q9UPN7 881 aa21.76■■□□□ 1.07
USP34-217ENST00000490527 ADRA2BP18089 450 aa21.71■■□□□ 1.07
USP34-217ENST00000490527 PIAS4Q8N2W9 510 aaPredicted RBP21.11■□□□□ 0.97
USP34-217ENST00000490527 MSH5O43196 834 aa20.48■□□□□ 0.87
USP34-217ENST00000490527 PPP4R3CPQ6ZMV5 832 aa20.11■□□□□ 0.81
USP34-217ENST00000490527 KCNA4P22459 653 aa19.9■□□□□ 0.78
USP34-217ENST00000490527 SCAF1Q9H7N4 1312 aaKnown RBP19.71■□□□□ 0.75
USP34-217ENST00000490527 MAPK8IP2Q13387 824 aaPredicted RBP19.67■□□□□ 0.74
USP34-217ENST00000490527 NCBP3Q53F19 620 aaKnown RBP19.54■□□□□ 0.72
USP34-217ENST00000490527 CNKSR2Q8WXI2 1034 aa19.47■□□□□ 0.71
USP34-217ENST00000490527 NPM3O75607 178 aaKnown RBP19.38■□□□□ 0.69
USP34-217ENST00000490527 DMRT2Q9Y5R5 561 aa19.29■□□□□ 0.68
USP34-217ENST00000490527 RNF216Q9NWF9 866 aaPredicted RBP19.06■□□□□ 0.64
USP34-217ENST00000490527 HOXD11P31277 338 aaPredicted RBP18.97■□□□□ 0.63
USP34-217ENST00000490527 SLC4A1APQ9BWU0 796 aaKnown RBP18.91■□□□□ 0.62
USP34-217ENST00000490527 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.6
USP34-217ENST00000490527 EHMT2Q96KQ7 1210 aa18.61■□□□□ 0.57
USP34-217ENST00000490527 POTEDQ86YR6 584 aa18.42■□□□□ 0.54
USP34-217ENST00000490527 DCAF8L1A6NGE4 600 aa18.38■□□□□ 0.53
USP34-217ENST00000490527 ZBTB22O15209 634 aa18.37■□□□□ 0.53
USP34-217ENST00000490527 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
USP34-217ENST00000490527 SLC4A2P04920 1241 aa18.3■□□□□ 0.52
USP34-217ENST00000490527 FOXD4L1Q9NU39 408 aa18.19■□□□□ 0.5
USP34-217ENST00000490527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.01■□□□□ 0.47
USP34-217ENST00000490527 MYCNP04198 464 aaPredicted RBP17.83■□□□□ 0.44
USP34-217ENST00000490527 U3KPZ7 1027 aaPredicted RBP17.82■□□□□ 0.44
USP34-217ENST00000490527 RNF39Q9H2S5 420 aa17.64■□□□□ 0.41
USP34-217ENST00000490527 ATXN8OSP0DMR3 200 aa17.52■□□□□ 0.4
USP34-217ENST00000490527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.51■□□□□ 0.39
USP34-217ENST00000490527 HNRNPUL2Q1KMD3 747 aaKnown RBP17.51■□□□□ 0.39
USP34-217ENST00000490527 SAMD1Q6SPF0 538 aaPredicted RBP17.5■□□□□ 0.39
USP34-217ENST00000490527 ATF5Q9Y2D1 282 aaPredicted RBP17.47■□□□□ 0.39
USP34-217ENST00000490527 C1QBPQ07021 282 aaKnown RBP17.39■□□□□ 0.37
USP34-217ENST00000490527 SPINK5Q9NQ38 1064 aaPredicted RBP17.29■□□□□ 0.36
USP34-217ENST00000490527 APLP2Q06481 763 aa17.25■□□□□ 0.35
USP34-217ENST00000490527 CAPN15O75808 1086 aa17.12■□□□□ 0.33
USP34-217ENST00000490527 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
USP34-217ENST00000490527 ZNF219Q9P2Y4 722 aaPredicted RBP17.09■□□□□ 0.33
USP34-217ENST00000490527 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
USP34-217ENST00000490527 POLA2Q14181 598 aa16.89■□□□□ 0.29
USP34-217ENST00000490527 ABCB7O75027 752 aa16.86■□□□□ 0.29
USP34-217ENST00000490527 DSG3P32926 999 aa16.86■□□□□ 0.29
USP34-217ENST00000490527 MKRN4PQ13434 485 aaPredicted RBP16.71■□□□□ 0.27
USP34-217ENST00000490527 FBLN2P98095 1184 aa16.55■□□□□ 0.24
USP34-217ENST00000490527 FKBP8Q14318 412 aa16.53■□□□□ 0.24
USP34-217ENST00000490527 ZBTB12Q9Y330 459 aaPredicted RBP16.52■□□□□ 0.24
USP34-217ENST00000490527 SPDYE4A6NLX3 237 aa16.33■□□□□ 0.2
USP34-217ENST00000490527 OSCARQ8IYS5 282 aa16.32■□□□□ 0.2
USP34-217ENST00000490527 SPDYE2BA6NHP3 402 aa16.15■□□□□ 0.18
USP34-217ENST00000490527 SPDYE6P0CI01 402 aa16.15■□□□□ 0.18
USP34-217ENST00000490527 SPDYE2Q495Y8 402 aa16.15■□□□□ 0.18
USP34-217ENST00000490527 PROM2Q8N271 834 aa16.15■□□□□ 0.18
USP34-217ENST00000490527 ZNF692Q9BU19 519 aaPredicted RBP16.12■□□□□ 0.17
USP34-217ENST00000490527 SSUH2Q9Y2M2 353 aa16.1■□□□□ 0.17
USP34-217ENST00000490527 PABPN1Q86U42 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
USP34-217ENST00000490527 RBM42Q9BTD8 480 aaKnown RBP15.94■□□□□ 0.14
USP34-217ENST00000490527 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
USP34-217ENST00000490527 FBXO3Q9UK99 471 aa15.81■□□□□ 0.12
USP34-217ENST00000490527 REM2Q8IYK8 340 aaPredicted RBP15.73■□□□□ 0.11
USP34-217ENST00000490527 VASPP50552 380 aaPredicted RBP15.67■□□□□ 0.1
USP34-217ENST00000490527 STAG3Q9UJ98 1225 aa15.63■□□□□ 0.09
USP34-217ENST00000490527 SPDYE1Q8NFV5 336 aaPredicted RBP15.61■□□□□ 0.09
USP34-217ENST00000490527 PITPNM1O00562 1244 aa15.55■□□□□ 0.08
USP34-217ENST00000490527 CLEC11AQ9Y240 323 aa15.55■□□□□ 0.08
USP34-217ENST00000490527 IFNLR1Q8IU57 520 aaPredicted RBP15.52■□□□□ 0.08
USP34-217ENST00000490527 MIER1Q8N108 512 aa15.44■□□□□ 0.06
USP34-217ENST00000490527 PRR29P0C7W0 189 aa15.43■□□□□ 0.06
USP34-217ENST00000490527 PLCD3Q8N3E9 789 aa15.41■□□□□ 0.06
USP34-217ENST00000490527 RTN4Q9NQC3 1192 aaKnown RBP15.4■□□□□ 0.06
USP34-217ENST00000490527 CREBZFQ9NS37 354 aa15.36■□□□□ 0.05
USP34-217ENST00000490527 AMER1Q5JTC6 1135 aaPredicted RBP15.33■□□□□ 0.04
USP34-217ENST00000490527 KLHL34Q8N239 644 aa15.3■□□□□ 0.04
USP34-217ENST00000490527 CHRDL2Q6WN34 429 aa15.28■□□□□ 0.04
USP34-217ENST00000490527 MNX1P50219 401 aaPredicted RBP15.25■□□□□ 0.03
USP34-217ENST00000490527 PLEKHG5O94827 1062 aa15.24■□□□□ 0.03
USP34-217ENST00000490527 FXR2P51116 673 aaKnown RBP eCLIP15.23■□□□□ 0.033e-14■■■■■ 30.8
USP34-217ENST00000490527 SPOCK2Q92563 424 aa15.23■□□□□ 0.03
USP34-217ENST00000490527 CHADLQ6NUI6 762 aa15.21■□□□□ 0.03
USP34-217ENST00000490527 ZBTB47Q9UFB7 747 aaPredicted RBP15.18■□□□□ 0.02
USP34-217ENST00000490527 PIP4P2Q8N4L2 257 aa15.16■□□□□ 0.02
USP34-217ENST00000490527 PRKAR2AP13861 404 aaKnown RBP15.14■□□□□ 0.01
USP34-217ENST00000490527 NUBP1P53384 320 aa15.1■□□□□ 0.01
USP34-217ENST00000490527 PKD2Q13563 968 aa15.08■□□□□ 0
USP34-217ENST00000490527 FARP1Q9Y4F1 1045 aaPredicted RBP15.06■□□□□ 0
USP34-217ENST00000490527 RASEFQ8IZ41 740 aa15□□□□□ -0.01
USP34-217ENST00000490527 NPM1P06748 294 aaKnown RBP eCLIP14.98□□□□□ -0.01
USP34-217ENST00000490527 CIZ1Q9ULV3 898 aaPredicted RBP14.95□□□□□ -0.02
USP34-217ENST00000490527 DCAF8Q5TAQ9 597 aa14.9□□□□□ -0.02
USP34-217ENST00000490527 GSE1Q14687 1217 aa14.88□□□□□ -0.03
USP34-217ENST00000490527 ECM2O94769 699 aaPredicted RBP14.87□□□□□ -0.03
USP34-217ENST00000490527 FAM212AQ96EL1 285 aa14.87□□□□□ -0.03
USP34-217ENST00000490527 TSPYL2Q9H2G4 693 aaPredicted RBP14.82□□□□□ -0.04
USP34-217ENST00000490527 RGL2O15211 777 aa14.79□□□□□ -0.04
USP34-217ENST00000490527 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms