RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 PRR15LQ9BU68 103 aa3.69□□□□□ -1.82
RBM39-236ENST00000490484 C10orf95Q9H7T3 257 aa3.69□□□□□ -1.82
RBM39-236ENST00000490484 TNP1P09430 55 aa3.68□□□□□ -1.82
RBM39-236ENST00000490484 ATP5EP56381 51 aaPredicted RBP3.68□□□□□ -1.82
RBM39-236ENST00000490484 MT1LQ93083 61 aa3.68□□□□□ -1.82
RBM39-236ENST00000490484 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
RBM39-236ENST00000490484 LINC01558Q9Y6Z2 57 aa3.62□□□□□ -1.83
RBM39-236ENST00000490484 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
RBM39-236ENST00000490484 A0A0A0MQY5 61 aa3.6□□□□□ -1.83
RBM39-236ENST00000490484 MT4P47944 62 aa3.6□□□□□ -1.83
RBM39-236ENST00000490484 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.83
RBM39-236ENST00000490484 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
RBM39-236ENST00000490484 TMEM258P61165 79 aa3.57□□□□□ -1.84
RBM39-236ENST00000490484 UQCR11O14957 56 aa3.55□□□□□ -1.84
RBM39-236ENST00000490484 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
RBM39-236ENST00000490484 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
RBM39-236ENST00000490484 KRTAP4-7Q9BYR0 210 aa3.52□□□□□ -1.85
RBM39-236ENST00000490484 MIR22HGQ0VDD5 57 aa3.48□□□□□ -1.85
RBM39-236ENST00000490484 KRTAP25-1Q3LHN0 102 aa3.45□□□□□ -1.86
RBM39-236ENST00000490484 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
RBM39-236ENST00000490484 K7ERS5 55 aa3.42□□□□□ -1.86
RBM39-236ENST00000490484 PSPHP1O15172 72 aa3.41□□□□□ -1.86
RBM39-236ENST00000490484 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
RBM39-236ENST00000490484 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
RBM39-236ENST00000490484 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
RBM39-236ENST00000490484 V9GYY9 64 aa3.37□□□□□ -1.87
RBM39-236ENST00000490484 Q1T7F1 81 aa3.34□□□□□ -1.87
RBM39-236ENST00000490484 KRTAP20-2Q3LI61 65 aa3.34□□□□□ -1.87
RBM39-236ENST00000490484 KRTAP9-9Q9BYP9 154 aa3.33□□□□□ -1.88
RBM39-236ENST00000490484 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
RBM39-236ENST00000490484 SPRR5A0A1B0GTR4 108 aa3.3□□□□□ -1.88
RBM39-236ENST00000490484 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
RBM39-236ENST00000490484 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
RBM39-236ENST00000490484 KRTAP15-1Q3LI76 137 aa3.29□□□□□ -1.88
RBM39-236ENST00000490484 A6NED7 52 aa3.28□□□□□ -1.88
RBM39-236ENST00000490484 SYNE1Q8NF91 8797 aaKnown RBP3.26□□□□□ -1.89
RBM39-236ENST00000490484 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
RBM39-236ENST00000490484 CDC42SE1Q9NRR8 79 aa3.25□□□□□ -1.89
RBM39-236ENST00000490484 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
RBM39-236ENST00000490484 ROMO1P60602 79 aa3.18□□□□□ -1.9
RBM39-236ENST00000490484 RPS28P62857 69 aaKnown RBP3.14□□□□□ -1.91
RBM39-236ENST00000490484 MT1AP04731 61 aa3.13□□□□□ -1.91
RBM39-236ENST00000490484 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
RBM39-236ENST00000490484 KRTAP9-6A8MVA2 160 aa3.08□□□□□ -1.92
RBM39-236ENST00000490484 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
RBM39-236ENST00000490484 KRTAP4-11Q9BYQ6 195 aa3.05□□□□□ -1.92
RBM39-236ENST00000490484 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
RBM39-236ENST00000490484 KRTAP6-2Q3LI66 62 aa3□□□□□ -1.93
RBM39-236ENST00000490484 PRAC1Q96KF2 57 aa2.96□□□□□ -1.94
RBM39-236ENST00000490484 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
RBM39-236ENST00000490484 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
RBM39-236ENST00000490484 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
RBM39-236ENST00000490484 MT3P25713 68 aa2.85□□□□□ -1.95
RBM39-236ENST00000490484 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
RBM39-236ENST00000490484 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
RBM39-236ENST00000490484 NDUFAF8A1L188 74 aa2.79□□□□□ -1.96
RBM39-236ENST00000490484 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
RBM39-236ENST00000490484 BRK1Q8WUW1 75 aa2.76□□□□□ -1.97
RBM39-236ENST00000490484 LCE1EQ5T753 118 aa2.62□□□□□ -1.99
RBM39-236ENST00000490484 PMAIP1Q13794 54 aa2.56□□□□□ -2
RBM39-236ENST00000490484 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
RBM39-236ENST00000490484 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
RBM39-236ENST00000490484 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
RBM39-236ENST00000490484 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
RBM39-236ENST00000490484 PRO0628Q9UI54 55 aa2.31□□□□□ -2.04
RBM39-236ENST00000490484 KTN1-AS1Q86SY8 53 aa2.24□□□□□ -2.05
RBM39-236ENST00000490484 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
RBM39-236ENST00000490484 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
RBM39-236ENST00000490484 LUZP6Q538Z0 58 aa2.19□□□□□ -2.06
RBM39-236ENST00000490484 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
RBM39-236ENST00000490484 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
RBM39-236ENST00000490484 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
RBM39-236ENST00000490484 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
RBM39-236ENST00000490484 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
RBM39-236ENST00000490484 PRM1P04553 51 aa1.64□□□□□ -2.15
RBM39-236ENST00000490484 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
RBM39-236ENST00000490484 INE1O15225 51 aa1.38□□□□□ -2.19
RBM39-236ENST00000490484 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 358 ms