RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 KRTAP4-12Q9BQ66 201 aa4.9□□□□□ -1.63
RIPPLY3-203ENST00000490393 MT1EP04732 61 aa4.89□□□□□ -1.63
RIPPLY3-203ENST00000490393 LCE3CQ5T5A8 94 aa4.87□□□□□ -1.63
RIPPLY3-203ENST00000490393 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
RIPPLY3-203ENST00000490393 MT1LQ93083 61 aa4.82□□□□□ -1.64
RIPPLY3-203ENST00000490393 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.78□□□□□ -1.64
RIPPLY3-203ENST00000490393 MACF1Q9UPN3 7388 aaKnown RBP4.75□□□□□ -1.65
RIPPLY3-203ENST00000490393 KRTAP19-3Q7Z4W3 81 aa4.67□□□□□ -1.66
RIPPLY3-203ENST00000490393 MT1GP13640 62 aa4.66□□□□□ -1.66
RIPPLY3-203ENST00000490393 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
RIPPLY3-203ENST00000490393 LCE3BQ5TA77 95 aa4.66□□□□□ -1.66
RIPPLY3-203ENST00000490393 KRTAP9-9Q9BYP9 154 aa4.66□□□□□ -1.66
RIPPLY3-203ENST00000490393 KRTAP9-4Q9BYQ2 154 aa4.66□□□□□ -1.66
RIPPLY3-203ENST00000490393 MUC12Q9UKN1 5478 aa4.65□□□□□ -1.67
RIPPLY3-203ENST00000490393 SPRR2FQ96RM1 72 aa4.64□□□□□ -1.67
RIPPLY3-203ENST00000490393 SYNE2Q8WXH0 6885 aaKnown RBP4.61□□□□□ -1.67
RIPPLY3-203ENST00000490393 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
RIPPLY3-203ENST00000490393 KRTAP5-9P26371 169 aa4.6□□□□□ -1.67
RIPPLY3-203ENST00000490393 MT1MQ8N339 61 aa4.59□□□□□ -1.67
RIPPLY3-203ENST00000490393 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
RIPPLY3-203ENST00000490393 KRTAP4-3Q9BYR4 195 aa4.49□□□□□ -1.69
RIPPLY3-203ENST00000490393 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
RIPPLY3-203ENST00000490393 INE1O15225 51 aa4.44□□□□□ -1.7
RIPPLY3-203ENST00000490393 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
RIPPLY3-203ENST00000490393 MDN1Q9NU22 5596 aa4.43□□□□□ -1.7
RIPPLY3-203ENST00000490393 LCE1DQ5T752 114 aa4.38□□□□□ -1.71
RIPPLY3-203ENST00000490393 SPRR2EP22531 72 aa4.37□□□□□ -1.71
RIPPLY3-203ENST00000490393 SPRR2BP35325 72 aa4.37□□□□□ -1.71
RIPPLY3-203ENST00000490393 SPRR2AP35326 72 aa4.37□□□□□ -1.71
RIPPLY3-203ENST00000490393 KRTAP2-3P0C7H8 128 aa4.36□□□□□ -1.71
RIPPLY3-203ENST00000490393 KRTAP2-4Q9BYR9 128 aa4.36□□□□□ -1.71
RIPPLY3-203ENST00000490393 KRTAP2-1Q9BYU5 128 aa4.36□□□□□ -1.71
RIPPLY3-203ENST00000490393 NEBP20929 6669 aa4.32□□□□□ -1.72
RIPPLY3-203ENST00000490393 DSTQ03001 7570 aaKnown RBP4.29□□□□□ -1.72
RIPPLY3-203ENST00000490393 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
RIPPLY3-203ENST00000490393 KRTAP20-1Q3LI63 56 aa4.22□□□□□ -1.73
RIPPLY3-203ENST00000490393 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
RIPPLY3-203ENST00000490393 SPRR2DP22532 72 aa4.2□□□□□ -1.74
RIPPLY3-203ENST00000490393 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
RIPPLY3-203ENST00000490393 KRTAP5-5Q701N2 237 aaPredicted RBP4.15□□□□□ -1.75
RIPPLY3-203ENST00000490393 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
RIPPLY3-203ENST00000490393 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
RIPPLY3-203ENST00000490393 MT1AP04731 61 aa4.09□□□□□ -1.75
RIPPLY3-203ENST00000490393 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
RIPPLY3-203ENST00000490393 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
RIPPLY3-203ENST00000490393 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.79
RIPPLY3-203ENST00000490393 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
RIPPLY3-203ENST00000490393 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
RIPPLY3-203ENST00000490393 MT3P25713 68 aa3.71□□□□□ -1.82
RIPPLY3-203ENST00000490393 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
RIPPLY3-203ENST00000490393 LCE3DQ9BYE3 92 aa3.68□□□□□ -1.82
RIPPLY3-203ENST00000490393 MT4P47944 62 aa3.62□□□□□ -1.83
RIPPLY3-203ENST00000490393 KRTAP20-2Q3LI61 65 aa3.6□□□□□ -1.83
RIPPLY3-203ENST00000490393 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
RIPPLY3-203ENST00000490393 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
RIPPLY3-203ENST00000490393 HMCN1Q96RW7 5635 aa3.54□□□□□ -1.84
RIPPLY3-203ENST00000490393 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
RIPPLY3-203ENST00000490393 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
RIPPLY3-203ENST00000490393 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
RIPPLY3-203ENST00000490393 KRTAP5-7Q6L8G8 165 aa3.37□□□□□ -1.87
RIPPLY3-203ENST00000490393 KRTAP5-10Q6L8G5 202 aa3.34□□□□□ -1.87
RIPPLY3-203ENST00000490393 AHNAKQ09666 5890 aaKnown RBP3.24□□□□□ -1.89
RIPPLY3-203ENST00000490393 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
RIPPLY3-203ENST00000490393 MUC5BQ9HC84 5762 aaPredicted RBP3.19□□□□□ -1.9
RIPPLY3-203ENST00000490393 PRM1P04553 51 aa3.18□□□□□ -1.9
RIPPLY3-203ENST00000490393 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
RIPPLY3-203ENST00000490393 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
RIPPLY3-203ENST00000490393 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
RIPPLY3-203ENST00000490393 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
RIPPLY3-203ENST00000490393 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
RIPPLY3-203ENST00000490393 KRTAP5-8O75690 187 aa2.96□□□□□ -1.93
RIPPLY3-203ENST00000490393 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
RIPPLY3-203ENST00000490393 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
RIPPLY3-203ENST00000490393 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
RIPPLY3-203ENST00000490393 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
RIPPLY3-203ENST00000490393 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
RIPPLY3-203ENST00000490393 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.09
RIPPLY3-203ENST00000490393 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 37 ms