RNA–Protein interactions for RNA: ENST00000490363.3

KCNT1-210, Transcript of potassium sodium-activated channel subfamily T member 1, human

TSL 5

Gene KCNT1, Length 4,065 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNT1-210	ENST00000490363	LCE3C	Q5T5A8	94 aa		4.62	□□□□□ -1.67
KCNT1-210	ENST00000490363	KRTAP4-7	Q9BYR0	210 aa		4.59	□□□□□ -1.67
KCNT1-210	ENST00000490363	MACF1	Q9UPN3	7388 aa	Known RBP	4.58	□□□□□ -1.68
KCNT1-210	ENST00000490363	SPRR2E	P22531	72 aa		4.58	□□□□□ -1.68
KCNT1-210	ENST00000490363	SPRR2B	P35325	72 aa		4.58	□□□□□ -1.68
KCNT1-210	ENST00000490363	SPRR2A	P35326	72 aa		4.58	□□□□□ -1.68
KCNT1-210	ENST00000490363	KRTAP9-6	A0A140TA67	174 aa		4.56	□□□□□ -1.68
KCNT1-210	ENST00000490363	MUC12	Q9UKN1	5478 aa		4.55	□□□□□ -1.68
KCNT1-210	ENST00000490363	MT1E	P04732	61 aa		4.49	□□□□□ -1.69
KCNT1-210	ENST00000490363	KRTAP19-7	Q3SYF9	63 aa		4.47	□□□□□ -1.69
KCNT1-210	ENST00000490363	MT1G	P13640	62 aa		4.45	□□□□□ -1.7
KCNT1-210	ENST00000490363	MT1L	Q93083	61 aa		4.44	□□□□□ -1.7
KCNT1-210	ENST00000490363	KRTAP19-3	Q7Z4W3	81 aa		4.42	□□□□□ -1.7
KCNT1-210	ENST00000490363	KRTAP4-3	Q9BYR4	195 aa		4.41	□□□□□ -1.7
KCNT1-210	ENST00000490363	SPRR2D	P22532	72 aa		4.39	□□□□□ -1.71
KCNT1-210	ENST00000490363	KRTAP12-4	P60329	112 aa		4.36	□□□□□ -1.71
KCNT1-210	ENST00000490363	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.33	□□□□□ -1.72
KCNT1-210	ENST00000490363	MT1M	Q8N339	61 aa		4.29	□□□□□ -1.72
KCNT1-210	ENST00000490363	LOC100996750	A0A140TA64	210 aa		4.29	□□□□□ -1.72
KCNT1-210	ENST00000490363	KRTAP9-7	A8MTY7	169 aa		4.27	□□□□□ -1.73
KCNT1-210	ENST00000490363	LCE3B	Q5TA77	95 aa		4.23	□□□□□ -1.73
KCNT1-210	ENST00000490363	KRTAP19-4	Q3LI73	84 aa		4.21	□□□□□ -1.74
KCNT1-210	ENST00000490363	MDN1	Q9NU22	5596 aa		4.2	□□□□□ -1.74
KCNT1-210	ENST00000490363	KRTAP9-6	A8MVA2	160 aa		4.19	□□□□□ -1.74
KCNT1-210	ENST00000490363	LCE1A	Q5T7P2	110 aa		4.15	□□□□□ -1.75
KCNT1-210	ENST00000490363	KRTAP6-3	Q3LI67	103 aa		4.14	□□□□□ -1.75
KCNT1-210	ENST00000490363	LCE5A	Q5TCM9	118 aa		4.09	□□□□□ -1.76
KCNT1-210	ENST00000490363	MT4	P47944	62 aa		4.01	□□□□□ -1.77
KCNT1-210	ENST00000490363	KRTAP5-9	P26371	169 aa		3.95	□□□□□ -1.78
KCNT1-210	ENST00000490363	KRTAP4-9	Q9BYQ8	210 aa		3.95	□□□□□ -1.78
KCNT1-210	ENST00000490363	KRTAP2-3	P0C7H8	128 aa		3.91	□□□□□ -1.78
KCNT1-210	ENST00000490363	KRTAP2-4	Q9BYR9	128 aa		3.91	□□□□□ -1.78
KCNT1-210	ENST00000490363	KRTAP2-1	Q9BYU5	128 aa		3.91	□□□□□ -1.78
KCNT1-210	ENST00000490363	LCE3D	Q9BYE3	92 aa		3.89	□□□□□ -1.79
KCNT1-210	ENST00000490363	PRM1	P04553	51 aa		3.88	□□□□□ -1.79
KCNT1-210	ENST00000490363	KRTAP20-1	Q3LI63	56 aa		3.85	□□□□□ -1.79
KCNT1-210	ENST00000490363	KRTAP6-1	Q3LI64	71 aa		3.81	□□□□□ -1.8
KCNT1-210	ENST00000490363	LCE3E	Q5T5B0	92 aa		3.81	□□□□□ -1.8
KCNT1-210	ENST00000490363	NEB	P20929	6669 aa		3.8	□□□□□ -1.8
KCNT1-210	ENST00000490363	MT1A	P04731	61 aa		3.78	□□□□□ -1.8
KCNT1-210	ENST00000490363	KRTAP2-2	Q9BYT5	123 aa		3.72	□□□□□ -1.81
KCNT1-210	ENST00000490363	MT3	P25713	68 aa		3.67	□□□□□ -1.82
KCNT1-210	ENST00000490363	KRTAP6-2	Q3LI66	62 aa		3.64	□□□□□ -1.83
KCNT1-210	ENST00000490363	MUC19	Q7Z5P9	8384 aa		3.64	□□□□□ -1.83
KCNT1-210	ENST00000490363	KRTAP4-6	Q9BYQ5	205 aa		3.57	□□□□□ -1.84
KCNT1-210	ENST00000490363	KRTAP9-4	Q9BYQ2	154 aa		3.56	□□□□□ -1.84
KCNT1-210	ENST00000490363	LCE4A	Q5TA78	99 aa		3.53	□□□□□ -1.84
KCNT1-210	ENST00000490363	LCE1D	Q5T752	114 aa		3.51	□□□□□ -1.85
KCNT1-210	ENST00000490363	LCE1B	Q5T7P3	118 aa		3.42	□□□□□ -1.86
KCNT1-210	ENST00000490363	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.35	□□□□□ -1.87
KCNT1-210	ENST00000490363	KRTAP20-2	Q3LI61	65 aa		3.34	□□□□□ -1.87
KCNT1-210	ENST00000490363	HMCN1	Q96RW7	5635 aa		3.3	□□□□□ -1.88
KCNT1-210	ENST00000490363	LCE1E	Q5T753	118 aa		3.22	□□□□□ -1.89
KCNT1-210	ENST00000490363	GPR98	Q8WXG9	6306 aa		3.2	□□□□□ -1.9
KCNT1-210	ENST00000490363	KRTAP5-4	Q6L8H1	288 aa		3.19	□□□□□ -1.9
KCNT1-210	ENST00000490363	MUC5AC	P98088	5654 aa		3.12	□□□□□ -1.91
KCNT1-210	ENST00000490363	KRTAP4-11	Q9BYQ6	195 aa		3	□□□□□ -1.93
KCNT1-210	ENST00000490363	KRTAP5-3	Q6L8H2	238 aa		2.93	□□□□□ -1.94
KCNT1-210	ENST00000490363	AHNAK2	Q8IVF2	5795 aa		2.88	□□□□□ -1.95
KCNT1-210	ENST00000490363	KRTAP9-9	Q9BYP9	154 aa		2.85	□□□□□ -1.95
KCNT1-210	ENST00000490363	KRTAP5-2	Q701N4	177 aa		2.83	□□□□□ -1.96
KCNT1-210	ENST00000490363	KRTAP4-12	Q9BQ66	201 aa		2.73	□□□□□ -1.97
KCNT1-210	ENST00000490363	KRTAP4-2	Q9BYR5	136 aa		2.73	□□□□□ -1.97
KCNT1-210	ENST00000490363	KRTAP5-8	O75690	187 aa		2.72	□□□□□ -1.97
KCNT1-210	ENST00000490363	LCE1C	Q5T751	118 aa		2.69	□□□□□ -1.98
KCNT1-210	ENST00000490363	LCE1F	Q5T754	118 aa		2.69	□□□□□ -1.98
KCNT1-210	ENST00000490363	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.65	□□□□□ -1.98
KCNT1-210	ENST00000490363	KRTAP4-4	Q9BYR3	166 aa		2.64	□□□□□ -1.99
KCNT1-210	ENST00000490363	KRTAP5-1	Q6L8H4	278 aa		2.57	□□□□□ -2
KCNT1-210	ENST00000490363	KRTAP5-10	Q6L8G5	202 aa		2.51	□□□□□ -2.01
KCNT1-210	ENST00000490363	AHNAK	Q09666	5890 aa	Known RBP	2.36	□□□□□ -2.03
KCNT1-210	ENST00000490363	KRTAP5-7	Q6L8G8	165 aa		2.26	□□□□□ -2.05
KCNT1-210	ENST00000490363	KRTAP21-2	Q3LI59	83 aa		2.24	□□□□□ -2.05
KCNT1-210	ENST00000490363	KRTAP5-11	Q6L8G4	156 aa		2.21	□□□□□ -2.06
KCNT1-210	ENST00000490363	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.12	□□□□□ -2.07
KCNT1-210	ENST00000490363	PHGR1	C9JFL3	82 aa		1.92	□□□□□ -2.1
KCNT1-210	ENST00000490363	KRTAP21-1	Q3LI58	79 aa		1.89	□□□□□ -2.11
KCNT1-210	ENST00000490363	MUC16	Q8WXI7	14507 aa		1.27	□□□□□ -2.21

Retrieved 78 of 20,778 RNA–protein pairs in 100.5 ms