RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 TNP1P09430 55 aa7.14□□□□□ -1.27
SMC4-222ENST00000490207 DSTQ03001 7570 aaKnown RBP7.13□□□□□ -1.27
SMC4-222ENST00000490207 MT1GP13640 62 aa7.12□□□□□ -1.27
SMC4-222ENST00000490207 LCE3AQ5TA76 89 aa7.1□□□□□ -1.27
SMC4-222ENST00000490207 PP632Q6XCG6 107 aa7.08□□□□□ -1.28
SMC4-222ENST00000490207 KRTAP4-7Q9BYR0 210 aa7.08□□□□□ -1.28
SMC4-222ENST00000490207 MT1LQ93083 61 aa7.03□□□□□ -1.28
SMC4-222ENST00000490207 UQCR11O14957 56 aa7.02□□□□□ -1.29
SMC4-222ENST00000490207 MT1MQ8N339 61 aa7.02□□□□□ -1.29
SMC4-222ENST00000490207 KRTAP4-9Q9BYQ8 210 aa6.99□□□□□ -1.29
SMC4-222ENST00000490207 MIR22HGQ0VDD5 57 aa6.86□□□□□ -1.31
SMC4-222ENST00000490207 KRTAP4-3Q9BYR4 195 aa6.83□□□□□ -1.32
SMC4-222ENST00000490207 KRTAP12-3P60328 96 aa6.82□□□□□ -1.32
SMC4-222ENST00000490207 KRTAP4-11Q9BYQ6 195 aa6.79□□□□□ -1.32
SMC4-222ENST00000490207 KRTAP4-2Q9BYR5 136 aa6.78□□□□□ -1.32
SMC4-222ENST00000490207 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
SMC4-222ENST00000490207 V9GYY9 64 aa6.76□□□□□ -1.33
SMC4-222ENST00000490207 K7ERS5 55 aa6.74□□□□□ -1.33
SMC4-222ENST00000490207 PSPHP1O15172 72 aa6.73□□□□□ -1.33
SMC4-222ENST00000490207 MT4P47944 62 aa6.73□□□□□ -1.33
SMC4-222ENST00000490207 KRTAP25-1Q3LHN0 102 aa6.73□□□□□ -1.33
SMC4-222ENST00000490207 Q1T7F1 81 aa6.7□□□□□ -1.34
SMC4-222ENST00000490207 GPR98Q8WXG9 6306 aa6.69□□□□□ -1.34
SMC4-222ENST00000490207 KRTAP5-4Q6L8H1 288 aa6.66□□□□□ -1.34
SMC4-222ENST00000490207 HMCN1Q96RW7 5635 aa6.65□□□□□ -1.34
SMC4-222ENST00000490207 A6NED7 52 aa6.52□□□□□ -1.37
SMC4-222ENST00000490207 AHNAK2Q8IVF2 5795 aa6.43□□□□□ -1.38
SMC4-222ENST00000490207 KRTAP5-5Q701N2 237 aaPredicted RBP6.42□□□□□ -1.38
SMC4-222ENST00000490207 CDC42SE1Q9NRR8 79 aa6.39□□□□□ -1.39
SMC4-222ENST00000490207 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
SMC4-222ENST00000490207 RPS28P62857 69 aaKnown RBP6.3□□□□□ -1.4
SMC4-222ENST00000490207 KRTAP20-2Q3LI61 65 aa6.3□□□□□ -1.4
SMC4-222ENST00000490207 KRTAP5-10Q6L8G5 202 aa6.29□□□□□ -1.4
SMC4-222ENST00000490207 ROMO1P60602 79 aa6.28□□□□□ -1.4
SMC4-222ENST00000490207 LCE3CQ5T5A8 94 aa6.27□□□□□ -1.41
SMC4-222ENST00000490207 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
SMC4-222ENST00000490207 KRTAP12-4P60329 112 aa6.25□□□□□ -1.41
SMC4-222ENST00000490207 SYNE1Q8NF91 8797 aaKnown RBP6.23□□□□□ -1.41
SMC4-222ENST00000490207 PCP4P48539 62 aa6.21□□□□□ -1.42
SMC4-222ENST00000490207 KRTAP5-3Q6L8H2 238 aa6.16□□□□□ -1.42
SMC4-222ENST00000490207 KRTAP5-7Q6L8G8 165 aa6.05□□□□□ -1.44
SMC4-222ENST00000490207 MT1AP04731 61 aa6□□□□□ -1.45
SMC4-222ENST00000490207 KRTAP6-1Q3LI64 71 aa5.95□□□□□ -1.46
SMC4-222ENST00000490207 KRTAP9-6A8MVA2 160 aa5.91□□□□□ -1.46
SMC4-222ENST00000490207 KRTAP5-2Q701N4 177 aa5.85□□□□□ -1.47
SMC4-222ENST00000490207 KRTAP6-2Q3LI66 62 aa5.68□□□□□ -1.5
SMC4-222ENST00000490207 SVIPQ8NHG7 77 aa5.63□□□□□ -1.51
SMC4-222ENST00000490207 BRK1Q8WUW1 75 aa5.58□□□□□ -1.52
SMC4-222ENST00000490207 KRTAP5-8O75690 187 aa5.55□□□□□ -1.52
SMC4-222ENST00000490207 MT3P25713 68 aa5.47□□□□□ -1.53
SMC4-222ENST00000490207 OBSCNQ5VST9 7968 aa5.41□□□□□ -1.54
SMC4-222ENST00000490207 A0A0A0MQY5 61 aa5.34□□□□□ -1.55
SMC4-222ENST00000490207 MUC5BQ9HC84 5762 aaPredicted RBP5.25□□□□□ -1.57
SMC4-222ENST00000490207 AHNAKQ09666 5890 aaKnown RBP5.23□□□□□ -1.57
SMC4-222ENST00000490207 MUC5ACP98088 5654 aa5.23□□□□□ -1.57
SMC4-222ENST00000490207 KRTAP5-1Q6L8H4 278 aa5.23□□□□□ -1.57
SMC4-222ENST00000490207 PMAIP1Q13794 54 aa5.21□□□□□ -1.58
SMC4-222ENST00000490207 PRAC1Q96KF2 57 aa5.06□□□□□ -1.6
SMC4-222ENST00000490207 LCE1EQ5T753 118 aa5□□□□□ -1.61
SMC4-222ENST00000490207 PRO0628Q9UI54 55 aa4.78□□□□□ -1.64
SMC4-222ENST00000490207 LCE1BQ5T7P3 118 aa4.74□□□□□ -1.65
SMC4-222ENST00000490207 LCE1CQ5T751 118 aa4.65□□□□□ -1.67
SMC4-222ENST00000490207 KTN1-AS1Q86SY8 53 aa4.62□□□□□ -1.67
SMC4-222ENST00000490207 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
SMC4-222ENST00000490207 LCE3DQ9BYE3 92 aa4.52□□□□□ -1.69
SMC4-222ENST00000490207 LCE1FQ5T754 118 aa4.5□□□□□ -1.69
SMC4-222ENST00000490207 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
SMC4-222ENST00000490207 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
SMC4-222ENST00000490207 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
SMC4-222ENST00000490207 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
SMC4-222ENST00000490207 KRTAP21-2Q3LI59 83 aa3.91□□□□□ -1.78
SMC4-222ENST00000490207 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
SMC4-222ENST00000490207 PHGR1C9JFL3 82 aa3.67□□□□□ -1.82
SMC4-222ENST00000490207 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
SMC4-222ENST00000490207 PRM1P04553 51 aa3.22□□□□□ -1.89
SMC4-222ENST00000490207 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
SMC4-222ENST00000490207 INE1O15225 51 aa2.67□□□□□ -1.98
SMC4-222ENST00000490207 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 93.8 ms