RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 HSPG2P98160 4391 aa0.96□□□□□ -2.26
TM9SF3-206ENST00000490192 KMT2CQ8NEZ4 4911 aaKnown RBP0.96□□□□□ -2.26
TM9SF3-206ENST00000490192 FAT3Q8TDW7 4589 aa0.96□□□□□ -2.26
TM9SF3-206ENST00000490192 VPS13BQ7Z7G8 4022 aa0.95□□□□□ -2.26
TM9SF3-206ENST00000490192 RYR3Q15413 4870 aa0.95□□□□□ -2.26
TM9SF3-206ENST00000490192 TNXBP22105 4242 aa0.94□□□□□ -2.26
TM9SF3-206ENST00000490192 RYR1P21817 5038 aa0.94□□□□□ -2.26
TM9SF3-206ENST00000490192 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
TM9SF3-206ENST00000490192 COX6B2Q6YFQ2 88 aa0.94□□□□□ -2.26
TM9SF3-206ENST00000490192 KIAA1109Q2LD37 5005 aa0.94□□□□□ -2.26
TM9SF3-206ENST00000490192 LRP1Q07954 4544 aaKnown RBP0.93□□□□□ -2.26
TM9SF3-206ENST00000490192 H0YAA0 97 aa0.93□□□□□ -2.26
TM9SF3-206ENST00000490192 EPPK1P58107 5090 aaKnown RBP0.92□□□□□ -2.26
TM9SF3-206ENST00000490192 H1FX-AS1Q4G0G2 97 aa0.92□□□□□ -2.26
TM9SF3-206ENST00000490192 KRTAP19-2Q3LHN2 52 aa0.91□□□□□ -2.26
TM9SF3-206ENST00000490192 MYCBP2O75592 4640 aa0.9□□□□□ -2.26
TM9SF3-206ENST00000490192 HERC2O95714 4834 aa0.89□□□□□ -2.27
TM9SF3-206ENST00000490192 ABCA13Q86UQ4 5058 aa0.89□□□□□ -2.27
TM9SF3-206ENST00000490192 S4R3F8 94 aa0.89□□□□□ -2.27
TM9SF3-206ENST00000490192 MUC17Q685J3 4493 aa0.88□□□□□ -2.27
TM9SF3-206ENST00000490192 LPAP08519 4548 aa0.87□□□□□ -2.27
TM9SF3-206ENST00000490192 AHNAKQ09666 5890 aaKnown RBP0.87□□□□□ -2.27
TM9SF3-206ENST00000490192 BIRC6Q9NR09 4857 aa0.86□□□□□ -2.27
TM9SF3-206ENST00000490192 HMCN2Q8NDA2 5059 aa0.86□□□□□ -2.27
TM9SF3-206ENST00000490192 LRP2P98164 4655 aa0.85□□□□□ -2.27
TM9SF3-206ENST00000490192 PCLOQ9Y6V0 5065 aa0.85□□□□□ -2.27
TM9SF3-206ENST00000490192 M0QZ58 72 aa0.84□□□□□ -2.27
TM9SF3-206ENST00000490192 HERC1Q15751 4861 aa0.83□□□□□ -2.28
TM9SF3-206ENST00000490192 UBR4Q5T4S7 5183 aa0.83□□□□□ -2.28
TM9SF3-206ENST00000490192 MT1HP80294 61 aa0.81□□□□□ -2.28
TM9SF3-206ENST00000490192 DMBT1Q9UGM3 2413 aaPredicted RBP0.81□□□□□ -2.28
TM9SF3-206ENST00000490192 MUC2Q02817 5179 aa0.81□□□□□ -2.28
TM9SF3-206ENST00000490192 RNF213Q63HN8 5207 aa0.8□□□□□ -2.28
TM9SF3-206ENST00000490192 MT2AP02795 61 aa0.8□□□□□ -2.28
TM9SF3-206ENST00000490192 SPRR2GQ9BYE4 73 aa0.8□□□□□ -2.28
TM9SF3-206ENST00000490192 FLGP20930 4061 aaPredicted RBP0.79□□□□□ -2.28
TM9SF3-206ENST00000490192 MT1FP04733 61 aa0.79□□□□□ -2.28
TM9SF3-206ENST00000490192 FAT4Q6V0I7 4981 aa0.78□□□□□ -2.28
TM9SF3-206ENST00000490192 MT1BP07438 61 aa0.78□□□□□ -2.28
TM9SF3-206ENST00000490192 KRTAP19-8Q3LI54 63 aa0.78□□□□□ -2.28
TM9SF3-206ENST00000490192 MUC5BQ9HC84 5762 aaPredicted RBP0.76□□□□□ -2.29
TM9SF3-206ENST00000490192 MT1XP80297 61 aa0.75□□□□□ -2.29
TM9SF3-206ENST00000490192 TNP1P09430 55 aa0.74□□□□□ -2.29
TM9SF3-206ENST00000490192 SYNE1Q8NF91 8797 aaKnown RBP0.73□□□□□ -2.29
TM9SF3-206ENST00000490192 M0R2T5 61 aa0.73□□□□□ -2.29
TM9SF3-206ENST00000490192 KRTAP8-1Q8IUC2 63 aa0.73□□□□□ -2.29
TM9SF3-206ENST00000490192 USH2AO75445 5202 aa0.7□□□□□ -2.3
TM9SF3-206ENST00000490192 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
TM9SF3-206ENST00000490192 KRTAP19-5Q3LI72 72 aa0.68□□□□□ -2.3
TM9SF3-206ENST00000490192 KRTAP19-7Q3SYF9 63 aa0.68□□□□□ -2.3
TM9SF3-206ENST00000490192 MACF1Q9UPN3 7388 aaKnown RBP0.66□□□□□ -2.3
TM9SF3-206ENST00000490192 MT1EP04732 61 aa0.66□□□□□ -2.3
TM9SF3-206ENST00000490192 KRTAP19-6Q3LI70 58 aa0.66□□□□□ -2.3
TM9SF3-206ENST00000490192 SSPOA2VEC9 5147 aa0.65□□□□□ -2.31
TM9SF3-206ENST00000490192 MT1LQ93083 61 aa0.65□□□□□ -2.31
TM9SF3-206ENST00000490192 GPR98Q8WXG9 6306 aa0.63□□□□□ -2.31
TM9SF3-206ENST00000490192 KMT2DO14686 5537 aa0.63□□□□□ -2.31
TM9SF3-206ENST00000490192 FSIP2Q5CZC0 6907 aa0.62□□□□□ -2.31
TM9SF3-206ENST00000490192 MUC5ACP98088 5654 aa0.62□□□□□ -2.31
TM9SF3-206ENST00000490192 MT1MQ8N339 61 aa0.61□□□□□ -2.31
TM9SF3-206ENST00000490192 SYNE2Q8WXH0 6885 aaKnown RBP0.61□□□□□ -2.31
TM9SF3-206ENST00000490192 DSTQ03001 7570 aaKnown RBP0.6□□□□□ -2.31
TM9SF3-206ENST00000490192 MT1GP13640 62 aa0.59□□□□□ -2.31
TM9SF3-206ENST00000490192 NEBP20929 6669 aa0.58□□□□□ -2.32
TM9SF3-206ENST00000490192 PRM1P04553 51 aa0.58□□□□□ -2.32
TM9SF3-206ENST00000490192 MUC12Q9UKN1 5478 aa0.57□□□□□ -2.32
TM9SF3-206ENST00000490192 SPRR2FQ96RM1 72 aa0.56□□□□□ -2.32
TM9SF3-206ENST00000490192 MT1AP04731 61 aa0.55□□□□□ -2.32
TM9SF3-206ENST00000490192 MDN1Q9NU22 5596 aa0.55□□□□□ -2.32
TM9SF3-206ENST00000490192 KRTAP6-1Q3LI64 71 aa0.54□□□□□ -2.32
TM9SF3-206ENST00000490192 SPRR2EP22531 72 aa0.52□□□□□ -2.33
TM9SF3-206ENST00000490192 SPRR2BP35325 72 aa0.52□□□□□ -2.33
TM9SF3-206ENST00000490192 SPRR2AP35326 72 aa0.52□□□□□ -2.33
TM9SF3-206ENST00000490192 SPRR2DP22532 72 aa0.5□□□□□ -2.33
TM9SF3-206ENST00000490192 KRTAP6-2Q3LI66 62 aa0.49□□□□□ -2.33
TM9SF3-206ENST00000490192 KRTAP20-2Q3LI61 65 aa0.46□□□□□ -2.34
TM9SF3-206ENST00000490192 MT4P47944 62 aa0.44□□□□□ -2.34
TM9SF3-206ENST00000490192 KRTAP20-1Q3LI63 56 aa0.43□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 93.6 ms