RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 DNAH7Q8WXX0 4024 aa0.75□□□□□ -2.29
HMGN1-218ENST00000490032 MYCBP2O75592 4640 aa0.74□□□□□ -2.29
HMGN1-218ENST00000490032 PKHD1P08F94 4074 aa0.74□□□□□ -2.29
HMGN1-218ENST00000490032 APOBP04114 4563 aaKnown RBP0.73□□□□□ -2.29
HMGN1-218ENST00000490032 DNAH10Q8IVF4 4471 aa0.73□□□□□ -2.29
HMGN1-218ENST00000490032 FAT2Q9NYQ8 4349 aa0.72□□□□□ -2.29
HMGN1-218ENST00000490032 DYNC1H1Q14204 4646 aaKnown RBP0.71□□□□□ -2.3
HMGN1-218ENST00000490032 LRP1BQ9NZR2 4599 aa0.71□□□□□ -2.3
HMGN1-218ENST00000490032 PKD1P98161 4303 aa0.71□□□□□ -2.3
HMGN1-218ENST00000490032 DNAH2Q9P225 4427 aa0.71□□□□□ -2.3
HMGN1-218ENST00000490032 VPS13DQ5THJ4 4388 aa0.71□□□□□ -2.3
HMGN1-218ENST00000490032 HMCN2Q8NDA2 5059 aa0.7□□□□□ -2.3
HMGN1-218ENST00000490032 DNAH5Q8TE73 4624 aa0.7□□□□□ -2.3
HMGN1-218ENST00000490032 LRP2P98164 4655 aa0.7□□□□□ -2.3
HMGN1-218ENST00000490032 DNAH17Q9UFH2 4485 aa0.7□□□□□ -2.3
HMGN1-218ENST00000490032 FAT1Q14517 4588 aa0.69□□□□□ -2.3
HMGN1-218ENST00000490032 DNAH6Q9C0G6 4158 aa0.69□□□□□ -2.3
HMGN1-218ENST00000490032 RNF213Q63HN8 5207 aa0.69□□□□□ -2.3
HMGN1-218ENST00000490032 FSIP2Q5CZC0 6907 aa0.69□□□□□ -2.3
HMGN1-218ENST00000490032 MUC2Q02817 5179 aa0.68□□□□□ -2.3
HMGN1-218ENST00000490032 MT1HP80294 61 aa0.68□□□□□ -2.3
HMGN1-218ENST00000490032 KRTAP20-1Q3LI63 56 aa0.68□□□□□ -2.3
HMGN1-218ENST00000490032 MUC5BQ9HC84 5762 aaPredicted RBP0.68□□□□□ -2.3
HMGN1-218ENST00000490032 LRP1Q07954 4544 aaKnown RBP0.68□□□□□ -2.3
HMGN1-218ENST00000490032 VPS13BQ7Z7G8 4022 aa0.67□□□□□ -2.3
HMGN1-218ENST00000490032 KRTAP8-1Q8IUC2 63 aa0.67□□□□□ -2.3
HMGN1-218ENST00000490032 FAT3Q8TDW7 4589 aa0.67□□□□□ -2.3
HMGN1-218ENST00000490032 PKHD1L1Q86WI1 4243 aa0.66□□□□□ -2.3
HMGN1-218ENST00000490032 KRTAP19-2Q3LHN2 52 aa0.66□□□□□ -2.3
HMGN1-218ENST00000490032 FAT4Q6V0I7 4981 aa0.65□□□□□ -2.3
HMGN1-218ENST00000490032 KRTAP2-3P0C7H8 128 aa0.64□□□□□ -2.31
HMGN1-218ENST00000490032 KRTAP19-6Q3LI70 58 aa0.64□□□□□ -2.31
HMGN1-218ENST00000490032 KRTAP2-4Q9BYR9 128 aa0.64□□□□□ -2.31
HMGN1-218ENST00000490032 SPRR2GQ9BYE4 73 aa0.63□□□□□ -2.31
HMGN1-218ENST00000490032 AHNAKQ09666 5890 aaKnown RBP0.63□□□□□ -2.31
HMGN1-218ENST00000490032 TNXBP22105 4242 aa0.62□□□□□ -2.31
HMGN1-218ENST00000490032 KRTAP2-1Q9BYU5 128 aa0.62□□□□□ -2.31
HMGN1-218ENST00000490032 LPAP08519 4548 aa0.62□□□□□ -2.31
HMGN1-218ENST00000490032 SYNE2Q8WXH0 6885 aaKnown RBP0.61□□□□□ -2.31
HMGN1-218ENST00000490032 SSPOA2VEC9 5147 aa0.61□□□□□ -2.31
HMGN1-218ENST00000490032 MT2AP02795 61 aa0.6□□□□□ -2.31
HMGN1-218ENST00000490032 DNAH8Q96JB1 4490 aa0.6□□□□□ -2.31
HMGN1-218ENST00000490032 NEBP20929 6669 aa0.59□□□□□ -2.31
HMGN1-218ENST00000490032 MT1FP04733 61 aa0.59□□□□□ -2.31
HMGN1-218ENST00000490032 MACF1Q9UPN3 7388 aaKnown RBP0.59□□□□□ -2.32
HMGN1-218ENST00000490032 MT1AP04731 61 aa0.57□□□□□ -2.32
HMGN1-218ENST00000490032 MT1EP04732 61 aa0.57□□□□□ -2.32
HMGN1-218ENST00000490032 SPRR2EP22531 72 aa0.57□□□□□ -2.32
HMGN1-218ENST00000490032 SPRR2BP35325 72 aa0.57□□□□□ -2.32
HMGN1-218ENST00000490032 SPRR2AP35326 72 aa0.57□□□□□ -2.32
HMGN1-218ENST00000490032 USH2AO75445 5202 aa0.57□□□□□ -2.32
HMGN1-218ENST00000490032 KRTAP19-8Q3LI54 63 aa0.56□□□□□ -2.32
HMGN1-218ENST00000490032 MT1LQ93083 61 aa0.56□□□□□ -2.32
HMGN1-218ENST00000490032 MUC17Q685J3 4493 aa0.55□□□□□ -2.32
HMGN1-218ENST00000490032 SPRR2DP22532 72 aa0.55□□□□□ -2.32
HMGN1-218ENST00000490032 SPRR2FQ96RM1 72 aa0.55□□□□□ -2.32
HMGN1-218ENST00000490032 KMT2DO14686 5537 aa0.55□□□□□ -2.32
HMGN1-218ENST00000490032 MT1BP07438 61 aa0.53□□□□□ -2.32
HMGN1-218ENST00000490032 GPR98Q8WXG9 6306 aa0.53□□□□□ -2.33
HMGN1-218ENST00000490032 KRTAP19-5Q3LI72 72 aa0.52□□□□□ -2.33
HMGN1-218ENST00000490032 MT1GP13640 62 aa0.51□□□□□ -2.33
HMGN1-218ENST00000490032 PRM1P04553 51 aa0.5□□□□□ -2.33
HMGN1-218ENST00000490032 MT1XP80297 61 aa0.5□□□□□ -2.33
HMGN1-218ENST00000490032 FLGP20930 4061 aaPredicted RBP0.49□□□□□ -2.33
HMGN1-218ENST00000490032 MUC12Q9UKN1 5478 aa0.49□□□□□ -2.33
HMGN1-218ENST00000490032 MDN1Q9NU22 5596 aa0.49□□□□□ -2.33
HMGN1-218ENST00000490032 MT4P47944 62 aa0.48□□□□□ -2.33
HMGN1-218ENST00000490032 MT1MQ8N339 61 aa0.48□□□□□ -2.33
HMGN1-218ENST00000490032 DSTQ03001 7570 aaKnown RBP0.48□□□□□ -2.33
HMGN1-218ENST00000490032 KRTAP19-3Q7Z4W3 81 aa0.45□□□□□ -2.34
HMGN1-218ENST00000490032 KRTAP20-2Q3LI61 65 aa0.44□□□□□ -2.34
HMGN1-218ENST00000490032 MUC5ACP98088 5654 aa0.43□□□□□ -2.34
HMGN1-218ENST00000490032 KRTAP6-2Q3LI66 62 aa0.42□□□□□ -2.34
HMGN1-218ENST00000490032 KRTAP19-7Q3SYF9 63 aa0.42□□□□□ -2.34
HMGN1-218ENST00000490032 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
HMGN1-218ENST00000490032 KRTAP6-1Q3LI64 71 aa0.35□□□□□ -2.35
HMGN1-218ENST00000490032 SYNE1Q8NF91 8797 aaKnown RBP0.35□□□□□ -2.35
HMGN1-218ENST00000490032 KRTAP21-1Q3LI58 79 aa0.33□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms