RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 MT1LQ93083 61 aa4.21□□□□□ -1.74
SEMA6C-208ENST00000489944 LINC01558Q9Y6Z2 57 aa4.21□□□□□ -1.74
SEMA6C-208ENST00000489944 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
SEMA6C-208ENST00000489944 KRTAP4-9Q9BYQ8 210 aa4.17□□□□□ -1.74
SEMA6C-208ENST00000489944 CCDC179H3BU77 68 aa4.15□□□□□ -1.75
SEMA6C-208ENST00000489944 UQCR11O14957 56 aa4.15□□□□□ -1.75
SEMA6C-208ENST00000489944 TMEM258P61165 79 aa4.13□□□□□ -1.75
SEMA6C-208ENST00000489944 LCE1DQ5T752 114 aa4.13□□□□□ -1.75
SEMA6C-208ENST00000489944 HMCN1Q96RW7 5635 aa4.1□□□□□ -1.75
SEMA6C-208ENST00000489944 KRTAP5-4Q6L8H1 288 aa4.1□□□□□ -1.75
SEMA6C-208ENST00000489944 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
SEMA6C-208ENST00000489944 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
SEMA6C-208ENST00000489944 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
SEMA6C-208ENST00000489944 KRTAP25-1Q3LHN0 102 aa4.05□□□□□ -1.76
SEMA6C-208ENST00000489944 K7ERS5 55 aa4.04□□□□□ -1.76
SEMA6C-208ENST00000489944 MT4P47944 62 aa4.04□□□□□ -1.76
SEMA6C-208ENST00000489944 V9GYY9 64 aa4.01□□□□□ -1.77
SEMA6C-208ENST00000489944 MIR22HGQ0VDD5 57 aa4□□□□□ -1.77
SEMA6C-208ENST00000489944 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
SEMA6C-208ENST00000489944 KRTAP23-1A1A580 65 aa3.97□□□□□ -1.77
SEMA6C-208ENST00000489944 AHNAK2Q8IVF2 5795 aa3.96□□□□□ -1.78
SEMA6C-208ENST00000489944 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
SEMA6C-208ENST00000489944 SPRR5A0A1B0GTR4 108 aa3.9□□□□□ -1.79
SEMA6C-208ENST00000489944 Q1T7F1 81 aa3.89□□□□□ -1.79
SEMA6C-208ENST00000489944 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
SEMA6C-208ENST00000489944 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
SEMA6C-208ENST00000489944 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
SEMA6C-208ENST00000489944 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
SEMA6C-208ENST00000489944 PSPHP1O15172 72 aa3.81□□□□□ -1.8
SEMA6C-208ENST00000489944 KRTAP15-1Q3LI76 137 aa3.81□□□□□ -1.8
SEMA6C-208ENST00000489944 KRTAP5-7Q6L8G8 165 aa3.79□□□□□ -1.8
SEMA6C-208ENST00000489944 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
SEMA6C-208ENST00000489944 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
SEMA6C-208ENST00000489944 CDC42SE1Q9NRR8 79 aa3.76□□□□□ -1.81
SEMA6C-208ENST00000489944 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
SEMA6C-208ENST00000489944 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
SEMA6C-208ENST00000489944 A6NED7 52 aa3.74□□□□□ -1.81
SEMA6C-208ENST00000489944 SVIPQ8NHG7 77 aa3.74□□□□□ -1.81
SEMA6C-208ENST00000489944 PCP4P48539 62 aa3.69□□□□□ -1.82
SEMA6C-208ENST00000489944 RPS28P62857 69 aaKnown RBP3.68□□□□□ -1.82
SEMA6C-208ENST00000489944 ROMO1P60602 79 aa3.67□□□□□ -1.82
SEMA6C-208ENST00000489944 MT1AP04731 61 aa3.62□□□□□ -1.83
SEMA6C-208ENST00000489944 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
SEMA6C-208ENST00000489944 KRTAP6-1Q3LI64 71 aa3.53□□□□□ -1.84
SEMA6C-208ENST00000489944 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
SEMA6C-208ENST00000489944 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
SEMA6C-208ENST00000489944 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.87
SEMA6C-208ENST00000489944 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
SEMA6C-208ENST00000489944 MT3P25713 68 aa3.35□□□□□ -1.87
SEMA6C-208ENST00000489944 AHNAKQ09666 5890 aaKnown RBP3.3□□□□□ -1.88
SEMA6C-208ENST00000489944 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
SEMA6C-208ENST00000489944 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
SEMA6C-208ENST00000489944 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
SEMA6C-208ENST00000489944 H3BS24 57 aa3.15□□□□□ -1.91
SEMA6C-208ENST00000489944 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
SEMA6C-208ENST00000489944 BRK1Q8WUW1 75 aa3.1□□□□□ -1.91
SEMA6C-208ENST00000489944 PRO0628Q9UI54 55 aa3.01□□□□□ -1.93
SEMA6C-208ENST00000489944 PMAIP1Q13794 54 aa2.94□□□□□ -1.94
SEMA6C-208ENST00000489944 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
SEMA6C-208ENST00000489944 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
SEMA6C-208ENST00000489944 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
SEMA6C-208ENST00000489944 KTN1-AS1Q86SY8 53 aa2.75□□□□□ -1.97
SEMA6C-208ENST00000489944 PRAC1Q96KF2 57 aa2.73□□□□□ -1.97
SEMA6C-208ENST00000489944 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
SEMA6C-208ENST00000489944 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
SEMA6C-208ENST00000489944 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
SEMA6C-208ENST00000489944 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
SEMA6C-208ENST00000489944 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
SEMA6C-208ENST00000489944 LUZP6Q538Z0 58 aa2.51□□□□□ -2.01
SEMA6C-208ENST00000489944 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
SEMA6C-208ENST00000489944 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
SEMA6C-208ENST00000489944 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
SEMA6C-208ENST00000489944 NDUFAF8A1L188 74 aa2.14□□□□□ -2.07
SEMA6C-208ENST00000489944 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
SEMA6C-208ENST00000489944 INE1O15225 51 aa1.85□□□□□ -2.11
SEMA6C-208ENST00000489944 PRM1P04553 51 aa1.81□□□□□ -2.12
SEMA6C-208ENST00000489944 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
SEMA6C-208ENST00000489944 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 56.2 ms