RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 MUC12Q9UKN1 5478 aa8.94□□□□□ -0.98
KCNC4-207ENST00000489935 KRTAP19-3Q7Z4W3 81 aa8.9□□□□□ -0.98
KCNC4-207ENST00000489935 KRTAP4-3Q9BYR4 195 aa8.84□□□□□ -0.99
KCNC4-207ENST00000489935 MT1GP13640 62 aa8.84□□□□□ -0.99
KCNC4-207ENST00000489935 MACF1Q9UPN3 7388 aaKnown RBP8.83□□□□□ -1
KCNC4-207ENST00000489935 MT1MQ8N339 61 aa8.82□□□□□ -1
KCNC4-207ENST00000489935 SPRR2FQ96RM1 72 aa8.81□□□□□ -1
KCNC4-207ENST00000489935 CRCT1Q9UGL9 99 aa8.72□□□□□ -1.01
KCNC4-207ENST00000489935 LCE5AQ5TCM9 118 aa8.69□□□□□ -1.02
KCNC4-207ENST00000489935 LOC100996750A0A140TA64 210 aa8.68□□□□□ -1.02
KCNC4-207ENST00000489935 KRTAP2-3P0C7H8 128 aa8.64□□□□□ -1.03
KCNC4-207ENST00000489935 KRTAP2-4Q9BYR9 128 aa8.64□□□□□ -1.03
KCNC4-207ENST00000489935 KRTAP2-1Q9BYU5 128 aa8.64□□□□□ -1.03
KCNC4-207ENST00000489935 SYNE2Q8WXH0 6885 aaKnown RBP8.57□□□□□ -1.04
KCNC4-207ENST00000489935 KRTAP5-9P26371 169 aa8.46□□□□□ -1.06
KCNC4-207ENST00000489935 INE1O15225 51 aa8.42□□□□□ -1.06
KCNC4-207ENST00000489935 DSTQ03001 7570 aaKnown RBP8.36□□□□□ -1.07
KCNC4-207ENST00000489935 LCE1AQ5T7P2 110 aa8.35□□□□□ -1.07
KCNC4-207ENST00000489935 MDN1Q9NU22 5596 aa8.33□□□□□ -1.08
KCNC4-207ENST00000489935 SPRR2EP22531 72 aa8.18□□□□□ -1.1
KCNC4-207ENST00000489935 SPRR2BP35325 72 aa8.18□□□□□ -1.1
KCNC4-207ENST00000489935 SPRR2AP35326 72 aa8.18□□□□□ -1.1
KCNC4-207ENST00000489935 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.05□□□□□ -1.12
KCNC4-207ENST00000489935 KRTAP6-3Q3LI67 103 aa8□□□□□ -1.13
KCNC4-207ENST00000489935 KRTAP9-6A0A140TA67 174 aa7.95□□□□□ -1.14
KCNC4-207ENST00000489935 KRTAP6-1Q3LI64 71 aa7.9□□□□□ -1.14
KCNC4-207ENST00000489935 KRTAP5-5Q701N2 237 aaPredicted RBP7.89□□□□□ -1.15
KCNC4-207ENST00000489935 MT1AP04731 61 aa7.86□□□□□ -1.15
KCNC4-207ENST00000489935 SPRR2DP22532 72 aa7.85□□□□□ -1.15
KCNC4-207ENST00000489935 LCE3BQ5TA77 95 aa7.82□□□□□ -1.16
KCNC4-207ENST00000489935 KRTAP4-9Q9BYQ8 210 aa7.59□□□□□ -1.2
KCNC4-207ENST00000489935 SYNE1Q8NF91 8797 aaKnown RBP7.57□□□□□ -1.2
KCNC4-207ENST00000489935 KRTAP12-4P60329 112 aa7.48□□□□□ -1.21
KCNC4-207ENST00000489935 KRTAP9-4Q9BYQ2 154 aa7.45□□□□□ -1.22
KCNC4-207ENST00000489935 NEBP20929 6669 aa7.43□□□□□ -1.22
KCNC4-207ENST00000489935 KRTAP9-7A8MTY7 169 aa7.38□□□□□ -1.23
KCNC4-207ENST00000489935 LCE3DQ9BYE3 92 aa7.25□□□□□ -1.25
KCNC4-207ENST00000489935 KRTAP5-4Q6L8H1 288 aa7.21□□□□□ -1.26
KCNC4-207ENST00000489935 KRTAP6-2Q3LI66 62 aa7.16□□□□□ -1.26
KCNC4-207ENST00000489935 LCE3EQ5T5B0 92 aa7.1□□□□□ -1.27
KCNC4-207ENST00000489935 MT3P25713 68 aa7.08□□□□□ -1.28
KCNC4-207ENST00000489935 KRTAP4-6Q9BYQ5 205 aa6.93□□□□□ -1.3
KCNC4-207ENST00000489935 MT4P47944 62 aa6.89□□□□□ -1.31
KCNC4-207ENST00000489935 LCE4AQ5TA78 99 aa6.87□□□□□ -1.31
KCNC4-207ENST00000489935 KRTAP2-2Q9BYT5 123 aa6.77□□□□□ -1.33
KCNC4-207ENST00000489935 KRTAP20-2Q3LI61 65 aa6.75□□□□□ -1.33
KCNC4-207ENST00000489935 OBSCNQ5VST9 7968 aa6.66□□□□□ -1.34
KCNC4-207ENST00000489935 KRTAP5-2Q701N4 177 aa6.64□□□□□ -1.35
KCNC4-207ENST00000489935 LCE1DQ5T752 114 aa6.62□□□□□ -1.35
KCNC4-207ENST00000489935 HMCN1Q96RW7 5635 aa6.6□□□□□ -1.35
KCNC4-207ENST00000489935 KRTAP20-1Q3LI63 56 aa6.56□□□□□ -1.36
KCNC4-207ENST00000489935 PRM1P04553 51 aa6.54□□□□□ -1.36
KCNC4-207ENST00000489935 KRTAP5-3Q6L8H2 238 aa6.49□□□□□ -1.37
KCNC4-207ENST00000489935 LCE1EQ5T753 118 aa5.95□□□□□ -1.46
KCNC4-207ENST00000489935 MUC5ACP98088 5654 aa5.85□□□□□ -1.47
KCNC4-207ENST00000489935 LCE1BQ5T7P3 118 aa5.75□□□□□ -1.49
KCNC4-207ENST00000489935 KRTAP5-1Q6L8H4 278 aa5.71□□□□□ -1.5
KCNC4-207ENST00000489935 KRTAP4-11Q9BYQ6 195 aa5.7□□□□□ -1.5
KCNC4-207ENST00000489935 KRTAP5-10Q6L8G5 202 aa5.66□□□□□ -1.5
KCNC4-207ENST00000489935 KRTAP4-2Q9BYR5 136 aa5.64□□□□□ -1.51
KCNC4-207ENST00000489935 LCE1CQ5T751 118 aa5.6□□□□□ -1.51
KCNC4-207ENST00000489935 AHNAK2Q8IVF2 5795 aa5.5□□□□□ -1.53
KCNC4-207ENST00000489935 KRTAP5-8O75690 187 aa5.49□□□□□ -1.53
KCNC4-207ENST00000489935 KRTAP5-7Q6L8G8 165 aa5.36□□□□□ -1.55
KCNC4-207ENST00000489935 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.27□□□□□ -1.57
KCNC4-207ENST00000489935 KRTAP21-2Q3LI59 83 aa5.15□□□□□ -1.59
KCNC4-207ENST00000489935 GPR98Q8WXG9 6306 aa4.88□□□□□ -1.63
KCNC4-207ENST00000489935 KRTAP5-11Q6L8G4 156 aa4.86□□□□□ -1.63
KCNC4-207ENST00000489935 MUC5BQ9HC84 5762 aaPredicted RBP4.75□□□□□ -1.65
KCNC4-207ENST00000489935 KRTAP9-9Q9BYP9 154 aa4.74□□□□□ -1.65
KCNC4-207ENST00000489935 KRTAP4-4Q9BYR3 166 aa4.65□□□□□ -1.67
KCNC4-207ENST00000489935 KRTAP4-12Q9BQ66 201 aa4.62□□□□□ -1.67
KCNC4-207ENST00000489935 PHGR1C9JFL3 82 aa4.2□□□□□ -1.74
KCNC4-207ENST00000489935 LCE1FQ5T754 118 aa4.15□□□□□ -1.74
KCNC4-207ENST00000489935 KRTAP21-1Q3LI58 79 aa4.07□□□□□ -1.76
KCNC4-207ENST00000489935 MUC19Q7Z5P9 8384 aa4.01□□□□□ -1.77
KCNC4-207ENST00000489935 AHNAKQ09666 5890 aaKnown RBP3.84□□□□□ -1.79
KCNC4-207ENST00000489935 MUC16Q8WXI7 14507 aa2.79□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 32.2 ms