RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 KRTAP5-7Q6L8G8 165 aa5.42□□□□□ -1.54
PLOD3-216ENST00000489927 KRTAP5-3Q6L8H2 238 aa5.4□□□□□ -1.54
PLOD3-216ENST00000489927 CCDC179H3BU77 68 aa5.39□□□□□ -1.55
PLOD3-216ENST00000489927 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
PLOD3-216ENST00000489927 TNP1P09430 55 aa5.34□□□□□ -1.55
PLOD3-216ENST00000489927 SMIM26A0A096LP01 95 aa5.31□□□□□ -1.56
PLOD3-216ENST00000489927 A8MU10 97 aa5.31□□□□□ -1.56
PLOD3-216ENST00000489927 KRTAP20-2Q3LI61 65 aa5.31□□□□□ -1.56
PLOD3-216ENST00000489927 A0A1B0GU69 56 aa5.29□□□□□ -1.56
PLOD3-216ENST00000489927 ATP5EP56381 51 aaPredicted RBP5.29□□□□□ -1.56
PLOD3-216ENST00000489927 KRTAP5-5Q701N2 237 aaPredicted RBP5.24□□□□□ -1.57
PLOD3-216ENST00000489927 SPRR5A0A1B0GTR4 108 aa5.23□□□□□ -1.57
PLOD3-216ENST00000489927 KRTAP12-3P60328 96 aa5.23□□□□□ -1.57
PLOD3-216ENST00000489927 TMEM258P61165 79 aa5.19□□□□□ -1.58
PLOD3-216ENST00000489927 PRR15LQ9BU68 103 aa5.17□□□□□ -1.58
PLOD3-216ENST00000489927 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
PLOD3-216ENST00000489927 LINC01558Q9Y6Z2 57 aa5.14□□□□□ -1.59
PLOD3-216ENST00000489927 SYNE1Q8NF91 8797 aaKnown RBP5.1□□□□□ -1.59
PLOD3-216ENST00000489927 LOC100996750A0A140TA64 210 aa5.09□□□□□ -1.59
PLOD3-216ENST00000489927 UQCR11O14957 56 aa5□□□□□ -1.61
PLOD3-216ENST00000489927 KRTAP4-11Q9BYQ6 195 aa4.92□□□□□ -1.62
PLOD3-216ENST00000489927 MIR22HGQ0VDD5 57 aa4.89□□□□□ -1.63
PLOD3-216ENST00000489927 V9GYY9 64 aa4.89□□□□□ -1.63
PLOD3-216ENST00000489927 PSPHP1O15172 72 aa4.87□□□□□ -1.63
PLOD3-216ENST00000489927 KRTAP25-1Q3LHN0 102 aa4.87□□□□□ -1.63
PLOD3-216ENST00000489927 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
PLOD3-216ENST00000489927 Q1T7F1 81 aa4.86□□□□□ -1.63
PLOD3-216ENST00000489927 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
PLOD3-216ENST00000489927 K7ERS5 55 aa4.79□□□□□ -1.64
PLOD3-216ENST00000489927 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
PLOD3-216ENST00000489927 LCE3CQ5T5A8 94 aa4.78□□□□□ -1.64
PLOD3-216ENST00000489927 KRTAP5-8O75690 187 aa4.77□□□□□ -1.65
PLOD3-216ENST00000489927 MT1AP04731 61 aa4.77□□□□□ -1.65
PLOD3-216ENST00000489927 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
PLOD3-216ENST00000489927 MUC5BQ9HC84 5762 aaPredicted RBP4.75□□□□□ -1.65
PLOD3-216ENST00000489927 MUC5ACP98088 5654 aa4.75□□□□□ -1.65
PLOD3-216ENST00000489927 AHNAKQ09666 5890 aaKnown RBP4.74□□□□□ -1.65
PLOD3-216ENST00000489927 PCP4P48539 62 aa4.74□□□□□ -1.65
PLOD3-216ENST00000489927 A6NED7 52 aa4.71□□□□□ -1.66
PLOD3-216ENST00000489927 RPS28P62857 69 aaKnown RBP4.68□□□□□ -1.66
PLOD3-216ENST00000489927 KRTAP23-1A1A580 65 aa4.66□□□□□ -1.66
PLOD3-216ENST00000489927 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
PLOD3-216ENST00000489927 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
PLOD3-216ENST00000489927 OBSCNQ5VST9 7968 aa4.62□□□□□ -1.67
PLOD3-216ENST00000489927 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
PLOD3-216ENST00000489927 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
PLOD3-216ENST00000489927 CDC42SE1Q9NRR8 79 aa4.55□□□□□ -1.68
PLOD3-216ENST00000489927 ROMO1P60602 79 aa4.47□□□□□ -1.69
PLOD3-216ENST00000489927 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
PLOD3-216ENST00000489927 MT3P25713 68 aa4.37□□□□□ -1.71
PLOD3-216ENST00000489927 BRK1Q8WUW1 75 aa4.15□□□□□ -1.75
PLOD3-216ENST00000489927 SVIPQ8NHG7 77 aa4.13□□□□□ -1.75
PLOD3-216ENST00000489927 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
PLOD3-216ENST00000489927 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
PLOD3-216ENST00000489927 PMAIP1Q13794 54 aa3.9□□□□□ -1.79
PLOD3-216ENST00000489927 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
PLOD3-216ENST00000489927 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
PLOD3-216ENST00000489927 PRAC1Q96KF2 57 aa3.75□□□□□ -1.81
PLOD3-216ENST00000489927 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
PLOD3-216ENST00000489927 PRO0628Q9UI54 55 aa3.67□□□□□ -1.82
PLOD3-216ENST00000489927 KTN1-AS1Q86SY8 53 aa3.5□□□□□ -1.85
PLOD3-216ENST00000489927 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
PLOD3-216ENST00000489927 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
PLOD3-216ENST00000489927 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
PLOD3-216ENST00000489927 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
PLOD3-216ENST00000489927 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
PLOD3-216ENST00000489927 KRTAP21-2Q3LI59 83 aa3.15□□□□□ -1.91
PLOD3-216ENST00000489927 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
PLOD3-216ENST00000489927 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
PLOD3-216ENST00000489927 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
PLOD3-216ENST00000489927 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
PLOD3-216ENST00000489927 H3BS24 57 aa2.84□□□□□ -1.95
PLOD3-216ENST00000489927 A0A0A0MQY5 61 aa2.62□□□□□ -1.99
PLOD3-216ENST00000489927 NDUFAF8A1L188 74 aa2.6□□□□□ -1.99
PLOD3-216ENST00000489927 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
PLOD3-216ENST00000489927 PRM1P04553 51 aa2.3□□□□□ -2.04
PLOD3-216ENST00000489927 INE1O15225 51 aa2.08□□□□□ -2.08
PLOD3-216ENST00000489927 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 9.9 ms