RNA–Protein interactions for RNA: ENST00000489912.1

LSM10-203, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM10, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-203ENST00000489912 A6NED7 52 aa8.15□□□□□ -1.1
LSM10-203ENST00000489912 DSTQ03001 7570 aaKnown RBP8.13□□□□□ -1.11
LSM10-203ENST00000489912 MT1GP13640 62 aa8.12□□□□□ -1.11
LSM10-203ENST00000489912 MT1LQ93083 61 aa8.11□□□□□ -1.11
LSM10-203ENST00000489912 PP632Q6XCG6 107 aa8.08□□□□□ -1.12
LSM10-203ENST00000489912 RPS28P62857 69 aaKnown RBP8.07□□□□□ -1.12
LSM10-203ENST00000489912 KRTAP25-1Q3LHN0 102 aa8.04□□□□□ -1.12
LSM10-203ENST00000489912 MT1MQ8N339 61 aa8.02□□□□□ -1.13
LSM10-203ENST00000489912 KRTAP12-3P60328 96 aa7.99□□□□□ -1.13
LSM10-203ENST00000489912 KRTAP4-3Q9BYR4 195 aa7.88□□□□□ -1.15
LSM10-203ENST00000489912 CDC42SE1Q9NRR8 79 aa7.81□□□□□ -1.16
LSM10-203ENST00000489912 KRTAP4-7Q9BYR0 210 aa7.77□□□□□ -1.17
LSM10-203ENST00000489912 KRTAP4-9Q9BYQ8 210 aa7.75□□□□□ -1.17
LSM10-203ENST00000489912 ROMO1P60602 79 aa7.7□□□□□ -1.18
LSM10-203ENST00000489912 KRTAP23-1A1A580 65 aa7.68□□□□□ -1.18
LSM10-203ENST00000489912 LCE4AQ5TA78 99 aa7.58□□□□□ -1.2
LSM10-203ENST00000489912 MT4P47944 62 aa7.56□□□□□ -1.2
LSM10-203ENST00000489912 LCE1DQ5T752 114 aa7.56□□□□□ -1.2
LSM10-203ENST00000489912 KRTAP15-1Q3LI76 137 aa7.53□□□□□ -1.2
LSM10-203ENST00000489912 KRTAP5-4Q6L8H1 288 aa7.46□□□□□ -1.22
LSM10-203ENST00000489912 KRTAP19-4Q3LI73 84 aa7.42□□□□□ -1.22
LSM10-203ENST00000489912 HMCN1Q96RW7 5635 aa7.4□□□□□ -1.23
LSM10-203ENST00000489912 LCE3CQ5T5A8 94 aa7.37□□□□□ -1.23
LSM10-203ENST00000489912 LOC100996750A0A140TA64 210 aa7.36□□□□□ -1.23
LSM10-203ENST00000489912 KRTAP4-6Q9BYQ5 205 aa7.33□□□□□ -1.24
LSM10-203ENST00000489912 GPR98Q8WXG9 6306 aa7.33□□□□□ -1.24
LSM10-203ENST00000489912 KRTAP5-5Q701N2 237 aaPredicted RBP7.29□□□□□ -1.24
LSM10-203ENST00000489912 BRK1Q8WUW1 75 aa7.24□□□□□ -1.25
LSM10-203ENST00000489912 AHNAK2Q8IVF2 5795 aa7.1□□□□□ -1.27
LSM10-203ENST00000489912 KRTAP12-4P60329 112 aa7.08□□□□□ -1.28
LSM10-203ENST00000489912 KRTAP20-2Q3LI61 65 aa7.07□□□□□ -1.28
LSM10-203ENST00000489912 SYNE1Q8NF91 8797 aaKnown RBP7.04□□□□□ -1.28
LSM10-203ENST00000489912 SPRR5A0A1B0GTR4 108 aa7.02□□□□□ -1.29
LSM10-203ENST00000489912 KRTAP9-6A8MVA2 160 aa6.96□□□□□ -1.3
LSM10-203ENST00000489912 MT1AP04731 61 aa6.89□□□□□ -1.31
LSM10-203ENST00000489912 KRTAP6-1Q3LI64 71 aa6.86□□□□□ -1.31
LSM10-203ENST00000489912 KRTAP5-10Q6L8G5 202 aa6.86□□□□□ -1.31
LSM10-203ENST00000489912 KRTAP5-3Q6L8H2 238 aa6.82□□□□□ -1.32
LSM10-203ENST00000489912 PMAIP1Q13794 54 aa6.79□□□□□ -1.32
LSM10-203ENST00000489912 KRTAP9-4Q9BYQ2 154 aa6.63□□□□□ -1.35
LSM10-203ENST00000489912 KRTAP5-2Q701N4 177 aa6.57□□□□□ -1.36
LSM10-203ENST00000489912 KRTAP5-7Q6L8G8 165 aa6.55□□□□□ -1.36
LSM10-203ENST00000489912 PRAC1Q96KF2 57 aa6.55□□□□□ -1.36
LSM10-203ENST00000489912 KRTAP6-2Q3LI66 62 aa6.52□□□□□ -1.37
LSM10-203ENST00000489912 PRO0628Q9UI54 55 aa6.4□□□□□ -1.38
LSM10-203ENST00000489912 KRTAP4-11Q9BYQ6 195 aa6.39□□□□□ -1.39
LSM10-203ENST00000489912 MT3P25713 68 aa6.29□□□□□ -1.4
LSM10-203ENST00000489912 OBSCNQ5VST9 7968 aa6.19□□□□□ -1.42
LSM10-203ENST00000489912 KRTAP5-8O75690 187 aa6.16□□□□□ -1.42
LSM10-203ENST00000489912 KTN1-AS1Q86SY8 53 aa6.1□□□□□ -1.43
LSM10-203ENST00000489912 SVIPQ8NHG7 77 aa5.93□□□□□ -1.46
LSM10-203ENST00000489912 KRTAP5-1Q6L8H4 278 aa5.86□□□□□ -1.47
LSM10-203ENST00000489912 KRTAP9-9Q9BYP9 154 aa5.83□□□□□ -1.48
LSM10-203ENST00000489912 MUC5ACP98088 5654 aa5.78□□□□□ -1.48
LSM10-203ENST00000489912 AHNAKQ09666 5890 aaKnown RBP5.76□□□□□ -1.49
LSM10-203ENST00000489912 MUC5BQ9HC84 5762 aaPredicted RBP5.76□□□□□ -1.49
LSM10-203ENST00000489912 LCE1EQ5T753 118 aa5.67□□□□□ -1.5
LSM10-203ENST00000489912 LUZP6Q538Z0 58 aa5.46□□□□□ -1.54
LSM10-203ENST00000489912 LCE1BQ5T7P3 118 aa5.45□□□□□ -1.54
LSM10-203ENST00000489912 KRTAP4-2Q9BYR5 136 aa5.37□□□□□ -1.55
LSM10-203ENST00000489912 LCE3DQ9BYE3 92 aa5.36□□□□□ -1.55
LSM10-203ENST00000489912 LCE1CQ5T751 118 aa5.27□□□□□ -1.57
LSM10-203ENST00000489912 LCE3EQ5T5B0 92 aa5.08□□□□□ -1.6
LSM10-203ENST00000489912 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
LSM10-203ENST00000489912 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.8□□□□□ -1.64
LSM10-203ENST00000489912 KRTAP5-11Q6L8G4 156 aa4.76□□□□□ -1.65
LSM10-203ENST00000489912 NDUFAF8A1L188 74 aa4.57□□□□□ -1.68
LSM10-203ENST00000489912 LCE1FQ5T754 118 aa4.55□□□□□ -1.68
LSM10-203ENST00000489912 KRTAP21-2Q3LI59 83 aa4.48□□□□□ -1.69
LSM10-203ENST00000489912 KRTAP4-4Q9BYR3 166 aa4.17□□□□□ -1.74
LSM10-203ENST00000489912 PHGR1C9JFL3 82 aa4.11□□□□□ -1.75
LSM10-203ENST00000489912 PRM1P04553 51 aa3.98□□□□□ -1.77
LSM10-203ENST00000489912 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
LSM10-203ENST00000489912 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
LSM10-203ENST00000489912 INE1O15225 51 aa3.63□□□□□ -1.83
LSM10-203ENST00000489912 H3BS24 57 aa3.43□□□□□ -1.86
LSM10-203ENST00000489912 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
LSM10-203ENST00000489912 MUC16Q8WXI7 14507 aa2.71□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 83.6 ms