RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 KRTAP4-7Q9BYR0 210 aa5.07□□□□□ -1.6
FAM3D-204ENST00000489857 KRTAP20-2Q3LI61 65 aa5.06□□□□□ -1.6
FAM3D-204ENST00000489857 H3BS24 57 aa5.03□□□□□ -1.6
FAM3D-204ENST00000489857 SPRR5A0A1B0GTR4 108 aa4.98□□□□□ -1.61
FAM3D-204ENST00000489857 TNP1P09430 55 aa4.98□□□□□ -1.61
FAM3D-204ENST00000489857 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
FAM3D-204ENST00000489857 SERP2Q8N6R1 65 aa4.94□□□□□ -1.62
FAM3D-204ENST00000489857 A8MU10 97 aa4.93□□□□□ -1.62
FAM3D-204ENST00000489857 SMIM26A0A096LP01 95 aa4.91□□□□□ -1.62
FAM3D-204ENST00000489857 KRTAP12-3P60328 96 aa4.9□□□□□ -1.63
FAM3D-204ENST00000489857 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
FAM3D-204ENST00000489857 ANAPC13Q9BS18 74 aa4.86□□□□□ -1.63
FAM3D-204ENST00000489857 RPS28P62857 69 aaKnown RBP4.84□□□□□ -1.63
FAM3D-204ENST00000489857 V9GYY9 64 aa4.84□□□□□ -1.63
FAM3D-204ENST00000489857 SYNE1Q8NF91 8797 aaKnown RBP4.84□□□□□ -1.63
FAM3D-204ENST00000489857 LOC100996750A0A140TA64 210 aa4.81□□□□□ -1.64
FAM3D-204ENST00000489857 A0A1B0GU69 56 aa4.8□□□□□ -1.64
FAM3D-204ENST00000489857 PRO0628Q9UI54 55 aa4.78□□□□□ -1.64
FAM3D-204ENST00000489857 H7BZZ5 65 aa4.72□□□□□ -1.65
FAM3D-204ENST00000489857 KRTAP4-11Q9BYQ6 195 aa4.7□□□□□ -1.66
FAM3D-204ENST00000489857 AHNAKQ09666 5890 aaKnown RBP4.68□□□□□ -1.66
FAM3D-204ENST00000489857 COX7CP15954 63 aa4.68□□□□□ -1.66
FAM3D-204ENST00000489857 CCDC179H3BU77 68 aa4.64□□□□□ -1.67
FAM3D-204ENST00000489857 TMEM258P61165 79 aa4.63□□□□□ -1.67
FAM3D-204ENST00000489857 MUC5ACP98088 5654 aa4.63□□□□□ -1.67
FAM3D-204ENST00000489857 KRTAP5-2Q701N4 177 aa4.61□□□□□ -1.67
FAM3D-204ENST00000489857 MUC5BQ9HC84 5762 aaPredicted RBP4.59□□□□□ -1.68
FAM3D-204ENST00000489857 KRTAP5-8O75690 187 aa4.56□□□□□ -1.68
FAM3D-204ENST00000489857 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
FAM3D-204ENST00000489857 PMAIP1Q13794 54 aa4.53□□□□□ -1.68
FAM3D-204ENST00000489857 PRR15LQ9BU68 103 aa4.53□□□□□ -1.68
FAM3D-204ENST00000489857 KRTAP25-1Q3LHN0 102 aa4.52□□□□□ -1.69
FAM3D-204ENST00000489857 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
FAM3D-204ENST00000489857 MT1AP04731 61 aa4.51□□□□□ -1.69
FAM3D-204ENST00000489857 LCE3CQ5T5A8 94 aa4.48□□□□□ -1.69
FAM3D-204ENST00000489857 ATP5EP56381 51 aaPredicted RBP4.45□□□□□ -1.7
FAM3D-204ENST00000489857 KRTAP15-1Q3LI76 137 aa4.45□□□□□ -1.7
FAM3D-204ENST00000489857 LINC01558Q9Y6Z2 57 aa4.44□□□□□ -1.7
FAM3D-204ENST00000489857 BRK1Q8WUW1 75 aa4.4□□□□□ -1.71
FAM3D-204ENST00000489857 UQCR11O14957 56 aa4.38□□□□□ -1.71
FAM3D-204ENST00000489857 KRTAP6-2Q3LI66 62 aa4.38□□□□□ -1.71
FAM3D-204ENST00000489857 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
FAM3D-204ENST00000489857 KRTAP9-9Q9BYP9 154 aa4.36□□□□□ -1.71
FAM3D-204ENST00000489857 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.71
FAM3D-204ENST00000489857 KTN1-AS1Q86SY8 53 aa4.33□□□□□ -1.72
FAM3D-204ENST00000489857 KRTAP23-1A1A580 65 aa4.32□□□□□ -1.72
FAM3D-204ENST00000489857 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
FAM3D-204ENST00000489857 MIR22HGQ0VDD5 57 aa4.26□□□□□ -1.73
FAM3D-204ENST00000489857 K7ERS5 55 aa4.21□□□□□ -1.74
FAM3D-204ENST00000489857 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
FAM3D-204ENST00000489857 Q1T7F1 81 aa4.19□□□□□ -1.74
FAM3D-204ENST00000489857 MT3P25713 68 aa4.13□□□□□ -1.75
FAM3D-204ENST00000489857 A0A0A0MQY5 61 aa4.09□□□□□ -1.75
FAM3D-204ENST00000489857 PSPHP1O15172 72 aa4.07□□□□□ -1.76
FAM3D-204ENST00000489857 CDC42SE1Q9NRR8 79 aa4□□□□□ -1.77
FAM3D-204ENST00000489857 A6NED7 52 aa3.92□□□□□ -1.78
FAM3D-204ENST00000489857 ROMO1P60602 79 aa3.9□□□□□ -1.79
FAM3D-204ENST00000489857 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
FAM3D-204ENST00000489857 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
FAM3D-204ENST00000489857 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
FAM3D-204ENST00000489857 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
FAM3D-204ENST00000489857 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
FAM3D-204ENST00000489857 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
FAM3D-204ENST00000489857 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
FAM3D-204ENST00000489857 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
FAM3D-204ENST00000489857 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
FAM3D-204ENST00000489857 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
FAM3D-204ENST00000489857 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
FAM3D-204ENST00000489857 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
FAM3D-204ENST00000489857 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
FAM3D-204ENST00000489857 INE1O15225 51 aa3.06□□□□□ -1.92
FAM3D-204ENST00000489857 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
FAM3D-204ENST00000489857 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
FAM3D-204ENST00000489857 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
FAM3D-204ENST00000489857 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
FAM3D-204ENST00000489857 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
FAM3D-204ENST00000489857 PRM1P04553 51 aa1.98□□□□□ -2.09
FAM3D-204ENST00000489857 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 119.6 ms