RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 MT1EP04732 61 aa5.27□□□□□ -1.57
COL9A1-208ENST00000489611 MT1LQ93083 61 aa5.24□□□□□ -1.57
COL9A1-208ENST00000489611 INE1O15225 51 aa5.23□□□□□ -1.57
COL9A1-208ENST00000489611 SYNE2Q8WXH0 6885 aaKnown RBP5.17□□□□□ -1.58
COL9A1-208ENST00000489611 KRTAP9-6A8MVA2 160 aa5.11□□□□□ -1.59
COL9A1-208ENST00000489611 SPRR2FQ96RM1 72 aa5.1□□□□□ -1.59
COL9A1-208ENST00000489611 MUC12Q9UKN1 5478 aa5.08□□□□□ -1.6
COL9A1-208ENST00000489611 KRTAP9-7A8MTY7 169 aa5.07□□□□□ -1.6
COL9A1-208ENST00000489611 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
COL9A1-208ENST00000489611 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
COL9A1-208ENST00000489611 MT1GP13640 62 aa5.02□□□□□ -1.61
COL9A1-208ENST00000489611 KRTAP5-9P26371 169 aa5.01□□□□□ -1.61
COL9A1-208ENST00000489611 KRTAP2-3P0C7H8 128 aa5.01□□□□□ -1.61
COL9A1-208ENST00000489611 KRTAP2-4Q9BYR9 128 aa5.01□□□□□ -1.61
COL9A1-208ENST00000489611 KRTAP2-1Q9BYU5 128 aa5.01□□□□□ -1.61
COL9A1-208ENST00000489611 KRTAP19-3Q7Z4W3 81 aa5□□□□□ -1.61
COL9A1-208ENST00000489611 MT1MQ8N339 61 aa4.93□□□□□ -1.62
COL9A1-208ENST00000489611 MDN1Q9NU22 5596 aa4.9□□□□□ -1.62
COL9A1-208ENST00000489611 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
COL9A1-208ENST00000489611 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
COL9A1-208ENST00000489611 SPRR2EP22531 72 aa4.84□□□□□ -1.63
COL9A1-208ENST00000489611 SPRR2BP35325 72 aa4.84□□□□□ -1.63
COL9A1-208ENST00000489611 SPRR2AP35326 72 aa4.84□□□□□ -1.63
COL9A1-208ENST00000489611 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
COL9A1-208ENST00000489611 LOC100996750A0A140TA64 210 aa4.73□□□□□ -1.65
COL9A1-208ENST00000489611 DSTQ03001 7570 aaKnown RBP4.71□□□□□ -1.66
COL9A1-208ENST00000489611 NEBP20929 6669 aa4.71□□□□□ -1.66
COL9A1-208ENST00000489611 SPRR2DP22532 72 aa4.66□□□□□ -1.66
COL9A1-208ENST00000489611 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
COL9A1-208ENST00000489611 KRTAP20-1Q3LI63 56 aa4.48□□□□□ -1.69
COL9A1-208ENST00000489611 MT1AP04731 61 aa4.46□□□□□ -1.69
COL9A1-208ENST00000489611 KRTAP5-5Q701N2 237 aaPredicted RBP4.41□□□□□ -1.7
COL9A1-208ENST00000489611 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
COL9A1-208ENST00000489611 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
COL9A1-208ENST00000489611 KRTAP12-4P60329 112 aa4.33□□□□□ -1.72
COL9A1-208ENST00000489611 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
COL9A1-208ENST00000489611 KRTAP9-4Q9BYQ2 154 aa4.2□□□□□ -1.74
COL9A1-208ENST00000489611 LCE3DQ9BYE3 92 aa4.19□□□□□ -1.74
COL9A1-208ENST00000489611 KRTAP5-4Q6L8H1 288 aa4.18□□□□□ -1.74
COL9A1-208ENST00000489611 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
COL9A1-208ENST00000489611 LCE3EQ5T5B0 92 aa4.13□□□□□ -1.75
COL9A1-208ENST00000489611 MT4P47944 62 aa4.09□□□□□ -1.76
COL9A1-208ENST00000489611 LCE4AQ5TA78 99 aa4.09□□□□□ -1.76
COL9A1-208ENST00000489611 KRTAP4-6Q9BYQ5 205 aa4.05□□□□□ -1.76
COL9A1-208ENST00000489611 MT3P25713 68 aa4.05□□□□□ -1.76
COL9A1-208ENST00000489611 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
COL9A1-208ENST00000489611 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
COL9A1-208ENST00000489611 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
COL9A1-208ENST00000489611 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
COL9A1-208ENST00000489611 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
COL9A1-208ENST00000489611 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
COL9A1-208ENST00000489611 PRM1P04553 51 aa3.77□□□□□ -1.81
COL9A1-208ENST00000489611 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
COL9A1-208ENST00000489611 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
COL9A1-208ENST00000489611 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
COL9A1-208ENST00000489611 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
COL9A1-208ENST00000489611 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
COL9A1-208ENST00000489611 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
COL9A1-208ENST00000489611 KRTAP5-7Q6L8G8 165 aa3.3□□□□□ -1.88
COL9A1-208ENST00000489611 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
COL9A1-208ENST00000489611 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
COL9A1-208ENST00000489611 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
COL9A1-208ENST00000489611 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
COL9A1-208ENST00000489611 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
COL9A1-208ENST00000489611 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
COL9A1-208ENST00000489611 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
COL9A1-208ENST00000489611 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
COL9A1-208ENST00000489611 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
COL9A1-208ENST00000489611 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
COL9A1-208ENST00000489611 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
COL9A1-208ENST00000489611 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
COL9A1-208ENST00000489611 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
COL9A1-208ENST00000489611 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
COL9A1-208ENST00000489611 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
COL9A1-208ENST00000489611 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
COL9A1-208ENST00000489611 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
COL9A1-208ENST00000489611 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
COL9A1-208ENST00000489611 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 67.3 ms