RNA–Protein interactions for RNA: ENST00000489519.1

CACFD1-205, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 795 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-205ENST00000489519 ANAPC13Q9BS18 74 aa6.95□□□□□ -1.3
CACFD1-205ENST00000489519 SVIPQ8NHG7 77 aa6.86□□□□□ -1.31
CACFD1-205ENST00000489519 PRR15LQ9BU68 103 aa6.85□□□□□ -1.31
CACFD1-205ENST00000489519 AHNAK2Q8IVF2 5795 aa6.84□□□□□ -1.31
CACFD1-205ENST00000489519 KRTAP4-6Q9BYQ5 205 aa6.84□□□□□ -1.31
CACFD1-205ENST00000489519 KRTAP12-3P60328 96 aa6.78□□□□□ -1.32
CACFD1-205ENST00000489519 KRTAP5-10Q6L8G5 202 aa6.77□□□□□ -1.33
CACFD1-205ENST00000489519 CCDC179H3BU77 68 aa6.75□□□□□ -1.33
CACFD1-205ENST00000489519 KRTAP4-7Q9BYR0 210 aa6.74□□□□□ -1.33
CACFD1-205ENST00000489519 ATP5EP56381 51 aaPredicted RBP6.71□□□□□ -1.34
CACFD1-205ENST00000489519 LINC01558Q9Y6Z2 57 aa6.7□□□□□ -1.34
CACFD1-205ENST00000489519 UQCR11O14957 56 aa6.61□□□□□ -1.35
CACFD1-205ENST00000489519 TMEM258P61165 79 aa6.59□□□□□ -1.35
CACFD1-205ENST00000489519 KRTAP5-3Q6L8H2 238 aa6.58□□□□□ -1.36
CACFD1-205ENST00000489519 KRTAP5-5Q701N2 237 aaPredicted RBP6.58□□□□□ -1.36
CACFD1-205ENST00000489519 KRTAP20-2Q3LI61 65 aa6.57□□□□□ -1.36
CACFD1-205ENST00000489519 SPRR5A0A1B0GTR4 108 aa6.55□□□□□ -1.36
CACFD1-205ENST00000489519 KRTAP5-7Q6L8G8 165 aa6.55□□□□□ -1.36
CACFD1-205ENST00000489519 KRTAP25-1Q3LHN0 102 aa6.54□□□□□ -1.36
CACFD1-205ENST00000489519 KRTAP12-4P60329 112 aa6.51□□□□□ -1.37
CACFD1-205ENST00000489519 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
CACFD1-205ENST00000489519 MIR22HGQ0VDD5 57 aa6.42□□□□□ -1.38
CACFD1-205ENST00000489519 LOC100996750A0A140TA64 210 aa6.39□□□□□ -1.39
CACFD1-205ENST00000489519 K7ERS5 55 aa6.39□□□□□ -1.39
CACFD1-205ENST00000489519 KRTAP23-1A1A580 65 aa6.3□□□□□ -1.4
CACFD1-205ENST00000489519 SYNE1Q8NF91 8797 aaKnown RBP6.29□□□□□ -1.4
CACFD1-205ENST00000489519 KRTAP15-1Q3LI76 137 aa6.28□□□□□ -1.4
CACFD1-205ENST00000489519 PCP4P48539 62 aa6.25□□□□□ -1.41
CACFD1-205ENST00000489519 LCE3CQ5T5A8 94 aa6.23□□□□□ -1.41
CACFD1-205ENST00000489519 V9GYY9 64 aa6.22□□□□□ -1.41
CACFD1-205ENST00000489519 PSPHP1O15172 72 aa6.15□□□□□ -1.42
CACFD1-205ENST00000489519 Q1T7F1 81 aa6.15□□□□□ -1.42
CACFD1-205ENST00000489519 RPS28P62857 69 aaKnown RBP6.1□□□□□ -1.43
CACFD1-205ENST00000489519 MT1AP04731 61 aa6.07□□□□□ -1.44
CACFD1-205ENST00000489519 KRTAP4-11Q9BYQ6 195 aa6.07□□□□□ -1.44
CACFD1-205ENST00000489519 KRTAP5-2Q701N4 177 aa6.05□□□□□ -1.44
CACFD1-205ENST00000489519 KRTAP6-1Q3LI64 71 aa6.03□□□□□ -1.44
CACFD1-205ENST00000489519 CDC42SE1Q9NRR8 79 aa5.99□□□□□ -1.45
CACFD1-205ENST00000489519 A6NED7 52 aa5.94□□□□□ -1.46
CACFD1-205ENST00000489519 KRTAP9-4Q9BYQ2 154 aa5.9□□□□□ -1.46
CACFD1-205ENST00000489519 ROMO1P60602 79 aa5.87□□□□□ -1.47
CACFD1-205ENST00000489519 KRTAP5-8O75690 187 aa5.85□□□□□ -1.47
CACFD1-205ENST00000489519 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.47
CACFD1-205ENST00000489519 KRTAP6-2Q3LI66 62 aa5.81□□□□□ -1.48
CACFD1-205ENST00000489519 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
CACFD1-205ENST00000489519 MUC5ACP98088 5654 aa5.67□□□□□ -1.5
CACFD1-205ENST00000489519 AHNAKQ09666 5890 aaKnown RBP5.66□□□□□ -1.5
CACFD1-205ENST00000489519 MUC5BQ9HC84 5762 aaPredicted RBP5.65□□□□□ -1.5
CACFD1-205ENST00000489519 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
CACFD1-205ENST00000489519 MT3P25713 68 aa5.59□□□□□ -1.51
CACFD1-205ENST00000489519 KRTAP5-1Q6L8H4 278 aa5.46□□□□□ -1.54
CACFD1-205ENST00000489519 H3BS24 57 aa5.37□□□□□ -1.55
CACFD1-205ENST00000489519 BRK1Q8WUW1 75 aa5.37□□□□□ -1.55
CACFD1-205ENST00000489519 LCE1EQ5T753 118 aa5.19□□□□□ -1.58
CACFD1-205ENST00000489519 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
CACFD1-205ENST00000489519 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
CACFD1-205ENST00000489519 PRO0628Q9UI54 55 aa4.95□□□□□ -1.62
CACFD1-205ENST00000489519 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
CACFD1-205ENST00000489519 LCE1BQ5T7P3 118 aa4.87□□□□□ -1.63
CACFD1-205ENST00000489519 LCE1CQ5T751 118 aa4.81□□□□□ -1.64
CACFD1-205ENST00000489519 PRAC1Q96KF2 57 aa4.75□□□□□ -1.65
CACFD1-205ENST00000489519 KTN1-AS1Q86SY8 53 aa4.66□□□□□ -1.66
CACFD1-205ENST00000489519 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
CACFD1-205ENST00000489519 LCE3DQ9BYE3 92 aa4.46□□□□□ -1.7
CACFD1-205ENST00000489519 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
CACFD1-205ENST00000489519 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
CACFD1-205ENST00000489519 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
CACFD1-205ENST00000489519 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
CACFD1-205ENST00000489519 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
CACFD1-205ENST00000489519 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
CACFD1-205ENST00000489519 PHGR1C9JFL3 82 aa3.95□□□□□ -1.78
CACFD1-205ENST00000489519 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
CACFD1-205ENST00000489519 NDUFAF8A1L188 74 aa3.59□□□□□ -1.83
CACFD1-205ENST00000489519 MUC19Q7Z5P9 8384 aa3.52□□□□□ -1.85
CACFD1-205ENST00000489519 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
CACFD1-205ENST00000489519 PRM1P04553 51 aa2.96□□□□□ -1.94
CACFD1-205ENST00000489519 INE1O15225 51 aa2.95□□□□□ -1.94
CACFD1-205ENST00000489519 MUC16Q8WXI7 14507 aa2.49□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 151.7 ms