RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 A6NED7 52 aa4.4□□□□□ -1.71
SMARCD3-213ENST00000489503 K7ERS5 55 aa4.39□□□□□ -1.71
SMARCD3-213ENST00000489503 MT1LQ93083 61 aa4.39□□□□□ -1.71
SMARCD3-213ENST00000489503 RPS28P62857 69 aaKnown RBP4.36□□□□□ -1.71
SMARCD3-213ENST00000489503 MT1GP13640 62 aa4.35□□□□□ -1.71
SMARCD3-213ENST00000489503 DSTQ03001 7570 aaKnown RBP4.34□□□□□ -1.71
SMARCD3-213ENST00000489503 MT1MQ8N339 61 aa4.34□□□□□ -1.71
SMARCD3-213ENST00000489503 KRTAP25-1Q3LHN0 102 aa4.32□□□□□ -1.72
SMARCD3-213ENST00000489503 H3BS24 57 aa4.31□□□□□ -1.72
SMARCD3-213ENST00000489503 KRTAP12-3P60328 96 aa4.31□□□□□ -1.72
SMARCD3-213ENST00000489503 PP632Q6XCG6 107 aa4.31□□□□□ -1.72
SMARCD3-213ENST00000489503 GPR98Q8WXG9 6306 aa4.3□□□□□ -1.72
SMARCD3-213ENST00000489503 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
SMARCD3-213ENST00000489503 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
SMARCD3-213ENST00000489503 CDC42SE1Q9NRR8 79 aa4.2□□□□□ -1.74
SMARCD3-213ENST00000489503 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
SMARCD3-213ENST00000489503 ROMO1P60602 79 aa4.15□□□□□ -1.75
SMARCD3-213ENST00000489503 KRTAP23-1A1A580 65 aa4.11□□□□□ -1.75
SMARCD3-213ENST00000489503 LOC100996750A0A140TA64 210 aa4.1□□□□□ -1.75
SMARCD3-213ENST00000489503 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
SMARCD3-213ENST00000489503 LCE1DQ5T752 114 aa4.08□□□□□ -1.76
SMARCD3-213ENST00000489503 MT4P47944 62 aa4.07□□□□□ -1.76
SMARCD3-213ENST00000489503 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
SMARCD3-213ENST00000489503 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
SMARCD3-213ENST00000489503 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
SMARCD3-213ENST00000489503 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
SMARCD3-213ENST00000489503 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
SMARCD3-213ENST00000489503 KRTAP5-5Q701N2 237 aaPredicted RBP3.95□□□□□ -1.78
SMARCD3-213ENST00000489503 KRTAP19-4Q3LI73 84 aa3.93□□□□□ -1.78
SMARCD3-213ENST00000489503 BRK1Q8WUW1 75 aa3.93□□□□□ -1.78
SMARCD3-213ENST00000489503 AHNAK2Q8IVF2 5795 aa3.83□□□□□ -1.8
SMARCD3-213ENST00000489503 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
SMARCD3-213ENST00000489503 A0A0A0MQY5 61 aa3.81□□□□□ -1.8
SMARCD3-213ENST00000489503 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
SMARCD3-213ENST00000489503 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
SMARCD3-213ENST00000489503 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
SMARCD3-213ENST00000489503 SPRR5A0A1B0GTR4 108 aa3.76□□□□□ -1.81
SMARCD3-213ENST00000489503 MT1AP04731 61 aa3.72□□□□□ -1.81
SMARCD3-213ENST00000489503 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
SMARCD3-213ENST00000489503 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
SMARCD3-213ENST00000489503 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
SMARCD3-213ENST00000489503 PMAIP1Q13794 54 aa3.66□□□□□ -1.82
SMARCD3-213ENST00000489503 PRAC1Q96KF2 57 aa3.6□□□□□ -1.83
SMARCD3-213ENST00000489503 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
SMARCD3-213ENST00000489503 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
SMARCD3-213ENST00000489503 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
SMARCD3-213ENST00000489503 KRTAP5-7Q6L8G8 165 aa3.52□□□□□ -1.85
SMARCD3-213ENST00000489503 PRO0628Q9UI54 55 aa3.48□□□□□ -1.85
SMARCD3-213ENST00000489503 KRTAP4-11Q9BYQ6 195 aa3.43□□□□□ -1.86
SMARCD3-213ENST00000489503 KRTAP9-9Q9BYP9 154 aa3.4□□□□□ -1.87
SMARCD3-213ENST00000489503 MT3P25713 68 aa3.37□□□□□ -1.87
SMARCD3-213ENST00000489503 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
SMARCD3-213ENST00000489503 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
SMARCD3-213ENST00000489503 KTN1-AS1Q86SY8 53 aa3.32□□□□□ -1.88
SMARCD3-213ENST00000489503 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
SMARCD3-213ENST00000489503 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
SMARCD3-213ENST00000489503 KRTAP4-2Q9BYR5 136 aa3.18□□□□□ -1.9
SMARCD3-213ENST00000489503 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
SMARCD3-213ENST00000489503 MUC5ACP98088 5654 aa3.15□□□□□ -1.91
SMARCD3-213ENST00000489503 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
SMARCD3-213ENST00000489503 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
SMARCD3-213ENST00000489503 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
SMARCD3-213ENST00000489503 LUZP6Q538Z0 58 aa2.9□□□□□ -1.95
SMARCD3-213ENST00000489503 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
SMARCD3-213ENST00000489503 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
SMARCD3-213ENST00000489503 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
SMARCD3-213ENST00000489503 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
SMARCD3-213ENST00000489503 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
SMARCD3-213ENST00000489503 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
SMARCD3-213ENST00000489503 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
SMARCD3-213ENST00000489503 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
SMARCD3-213ENST00000489503 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
SMARCD3-213ENST00000489503 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
SMARCD3-213ENST00000489503 PRM1P04553 51 aa2.17□□□□□ -2.06
SMARCD3-213ENST00000489503 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
SMARCD3-213ENST00000489503 INE1O15225 51 aa1.94□□□□□ -2.1
SMARCD3-213ENST00000489503 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
SMARCD3-213ENST00000489503 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 58.9 ms