RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 MT1GP13640 62 aa6.9□□□□□ -1.3
MRPL55-230ENST00000489430 C10orf95Q9H7T3 257 aa6.9□□□□□ -1.3
MRPL55-230ENST00000489430 PP632Q6XCG6 107 aa6.86□□□□□ -1.31
MRPL55-230ENST00000489430 V9GYY9 64 aa6.85□□□□□ -1.31
MRPL55-230ENST00000489430 LCE3AQ5TA76 89 aa6.8□□□□□ -1.32
MRPL55-230ENST00000489430 MT1LQ93083 61 aa6.77□□□□□ -1.33
MRPL55-230ENST00000489430 MIR22HGQ0VDD5 57 aa6.74□□□□□ -1.33
MRPL55-230ENST00000489430 KRTAP4-9Q9BYQ8 210 aa6.73□□□□□ -1.33
MRPL55-230ENST00000489430 Q1T7F1 81 aa6.72□□□□□ -1.33
MRPL55-230ENST00000489430 MT1MQ8N339 61 aa6.72□□□□□ -1.33
MRPL55-230ENST00000489430 PSPHP1O15172 72 aa6.71□□□□□ -1.34
MRPL55-230ENST00000489430 K7ERS5 55 aa6.68□□□□□ -1.34
MRPL55-230ENST00000489430 PCP4P48539 62 aa6.67□□□□□ -1.34
MRPL55-230ENST00000489430 KRTAP12-3P60328 96 aa6.6□□□□□ -1.35
MRPL55-230ENST00000489430 KRTAP4-2Q9BYR5 136 aa6.59□□□□□ -1.35
MRPL55-230ENST00000489430 KRTAP25-1Q3LHN0 102 aa6.58□□□□□ -1.36
MRPL55-230ENST00000489430 RPS28P62857 69 aaKnown RBP6.56□□□□□ -1.36
MRPL55-230ENST00000489430 LCE4AQ5TA78 99 aa6.55□□□□□ -1.36
MRPL55-230ENST00000489430 A6NED7 52 aa6.54□□□□□ -1.36
MRPL55-230ENST00000489430 KRTAP19-4Q3LI73 84 aa6.52□□□□□ -1.37
MRPL55-230ENST00000489430 KRTAP4-3Q9BYR4 195 aa6.48□□□□□ -1.37
MRPL55-230ENST00000489430 GPR98Q8WXG9 6306 aa6.48□□□□□ -1.37
MRPL55-230ENST00000489430 KRTAP4-11Q9BYQ6 195 aa6.46□□□□□ -1.38
MRPL55-230ENST00000489430 KRTAP5-4Q6L8H1 288 aa6.43□□□□□ -1.38
MRPL55-230ENST00000489430 HMCN1Q96RW7 5635 aa6.41□□□□□ -1.38
MRPL55-230ENST00000489430 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.38
MRPL55-230ENST00000489430 MT4P47944 62 aa6.37□□□□□ -1.39
MRPL55-230ENST00000489430 CDC42SE1Q9NRR8 79 aa6.29□□□□□ -1.4
MRPL55-230ENST00000489430 KRTAP15-1Q3LI76 137 aa6.19□□□□□ -1.42
MRPL55-230ENST00000489430 KRTAP5-5Q701N2 237 aaPredicted RBP6.19□□□□□ -1.42
MRPL55-230ENST00000489430 ROMO1P60602 79 aa6.17□□□□□ -1.42
MRPL55-230ENST00000489430 AHNAK2Q8IVF2 5795 aa6.12□□□□□ -1.43
MRPL55-230ENST00000489430 H3BS24 57 aa6.09□□□□□ -1.43
MRPL55-230ENST00000489430 LCE3CQ5T5A8 94 aa6.08□□□□□ -1.44
MRPL55-230ENST00000489430 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
MRPL55-230ENST00000489430 KRTAP12-4P60329 112 aa6.05□□□□□ -1.44
MRPL55-230ENST00000489430 KRTAP20-2Q3LI61 65 aa6.04□□□□□ -1.44
MRPL55-230ENST00000489430 KRTAP5-10Q6L8G5 202 aa6.01□□□□□ -1.45
MRPL55-230ENST00000489430 SYNE1Q8NF91 8797 aaKnown RBP5.97□□□□□ -1.45
MRPL55-230ENST00000489430 KRTAP5-3Q6L8H2 238 aa5.93□□□□□ -1.46
MRPL55-230ENST00000489430 BRK1Q8WUW1 75 aa5.84□□□□□ -1.47
MRPL55-230ENST00000489430 KRTAP5-7Q6L8G8 165 aa5.8□□□□□ -1.48
MRPL55-230ENST00000489430 MT1AP04731 61 aa5.77□□□□□ -1.49
MRPL55-230ENST00000489430 KRTAP6-1Q3LI64 71 aa5.69□□□□□ -1.5
MRPL55-230ENST00000489430 KRTAP9-6A8MVA2 160 aa5.68□□□□□ -1.5
MRPL55-230ENST00000489430 KRTAP5-2Q701N4 177 aa5.65□□□□□ -1.5
MRPL55-230ENST00000489430 PMAIP1Q13794 54 aa5.51□□□□□ -1.53
MRPL55-230ENST00000489430 KRTAP6-2Q3LI66 62 aa5.44□□□□□ -1.54
MRPL55-230ENST00000489430 OBSCNQ5VST9 7968 aa5.32□□□□□ -1.56
MRPL55-230ENST00000489430 KRTAP5-8O75690 187 aa5.31□□□□□ -1.56
MRPL55-230ENST00000489430 MT3P25713 68 aa5.31□□□□□ -1.56
MRPL55-230ENST00000489430 PRO0628Q9UI54 55 aa5.26□□□□□ -1.57
MRPL55-230ENST00000489430 PRAC1Q96KF2 57 aa5.19□□□□□ -1.58
MRPL55-230ENST00000489430 MUC5BQ9HC84 5762 aaPredicted RBP5.08□□□□□ -1.6
MRPL55-230ENST00000489430 AHNAKQ09666 5890 aaKnown RBP5.04□□□□□ -1.6
MRPL55-230ENST00000489430 MUC5ACP98088 5654 aa5.03□□□□□ -1.6
MRPL55-230ENST00000489430 KRTAP5-1Q6L8H4 278 aa5.03□□□□□ -1.6
MRPL55-230ENST00000489430 SVIPQ8NHG7 77 aa5.01□□□□□ -1.61
MRPL55-230ENST00000489430 KTN1-AS1Q86SY8 53 aa4.97□□□□□ -1.61
MRPL55-230ENST00000489430 LCE1EQ5T753 118 aa4.91□□□□□ -1.62
MRPL55-230ENST00000489430 LCE1CQ5T751 118 aa4.54□□□□□ -1.68
MRPL55-230ENST00000489430 LCE1BQ5T7P3 118 aa4.54□□□□□ -1.68
MRPL55-230ENST00000489430 LUZP6Q538Z0 58 aa4.5□□□□□ -1.69
MRPL55-230ENST00000489430 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.44□□□□□ -1.7
MRPL55-230ENST00000489430 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.71
MRPL55-230ENST00000489430 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
MRPL55-230ENST00000489430 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
MRPL55-230ENST00000489430 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
MRPL55-230ENST00000489430 KRTAP21-2Q3LI59 83 aa3.78□□□□□ -1.8
MRPL55-230ENST00000489430 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
MRPL55-230ENST00000489430 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
MRPL55-230ENST00000489430 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
MRPL55-230ENST00000489430 A0A0A0MQY5 61 aa3.31□□□□□ -1.88
MRPL55-230ENST00000489430 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
MRPL55-230ENST00000489430 INE1O15225 51 aa3.14□□□□□ -1.91
MRPL55-230ENST00000489430 PRM1P04553 51 aa3.14□□□□□ -1.91
MRPL55-230ENST00000489430 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
MRPL55-230ENST00000489430 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 35.4 ms