RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 MT1EP04732 61 aa6.62□□□□□ -1.35
HMG20B-213ENST00000488973 FSIP2Q5CZC0 6907 aa6.52□□□□□ -1.37
HMG20B-213ENST00000488973 FCGBPQ9Y6R7 5405 aaPredicted RBP6.4□□□□□ -1.39
HMG20B-213ENST00000488973 KRTAP9-2Q9BYQ4 174 aa6.33□□□□□ -1.4
HMG20B-213ENST00000488973 LOC100996750A0A140TA64 210 aa6.26□□□□□ -1.41
HMG20B-213ENST00000488973 KRTAP4-3Q9BYR4 195 aa6.22□□□□□ -1.41
HMG20B-213ENST00000488973 MT1GP13640 62 aa6.2□□□□□ -1.42
HMG20B-213ENST00000488973 MT1MQ8N339 61 aa6.17□□□□□ -1.42
HMG20B-213ENST00000488973 CRCT1Q9UGL9 99 aa6.16□□□□□ -1.42
HMG20B-213ENST00000488973 KRTAP12-4P60329 112 aa6.14□□□□□ -1.43
HMG20B-213ENST00000488973 KRTAP19-3Q7Z4W3 81 aa6.14□□□□□ -1.43
HMG20B-213ENST00000488973 SPRR2FQ96RM1 72 aa6.04□□□□□ -1.44
HMG20B-213ENST00000488973 MACF1Q9UPN3 7388 aaKnown RBP6.03□□□□□ -1.44
HMG20B-213ENST00000488973 MUC12Q9UKN1 5478 aa6□□□□□ -1.45
HMG20B-213ENST00000488973 LCE5AQ5TCM9 118 aa5.95□□□□□ -1.46
HMG20B-213ENST00000488973 KRTAP5-9P26371 169 aa5.92□□□□□ -1.46
HMG20B-213ENST00000488973 KRTAP2-2Q9BYT5 123 aa5.83□□□□□ -1.48
HMG20B-213ENST00000488973 LCE3BQ5TA77 95 aa5.79□□□□□ -1.48
HMG20B-213ENST00000488973 SYNE2Q8WXH0 6885 aaKnown RBP5.79□□□□□ -1.48
HMG20B-213ENST00000488973 MT1AP04731 61 aa5.77□□□□□ -1.49
HMG20B-213ENST00000488973 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
HMG20B-213ENST00000488973 DSTQ03001 7570 aaKnown RBP5.75□□□□□ -1.49
HMG20B-213ENST00000488973 KRTAP6-3Q3LI67 103 aa5.74□□□□□ -1.49
HMG20B-213ENST00000488973 KRTAP9-6A0A140TA67 174 aa5.7□□□□□ -1.5
HMG20B-213ENST00000488973 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.69□□□□□ -1.5
HMG20B-213ENST00000488973 KRTAP4-9Q9BYQ8 210 aa5.68□□□□□ -1.5
HMG20B-213ENST00000488973 MDN1Q9NU22 5596 aa5.66□□□□□ -1.5
HMG20B-213ENST00000488973 SPRR2EP22531 72 aa5.65□□□□□ -1.51
HMG20B-213ENST00000488973 SPRR2BP35325 72 aa5.65□□□□□ -1.51
HMG20B-213ENST00000488973 SPRR2AP35326 72 aa5.65□□□□□ -1.51
HMG20B-213ENST00000488973 KRTAP6-1Q3LI64 71 aa5.64□□□□□ -1.51
HMG20B-213ENST00000488973 SYNE1Q8NF91 8797 aaKnown RBP5.59□□□□□ -1.51
HMG20B-213ENST00000488973 LCE3DQ9BYE3 92 aa5.58□□□□□ -1.52
HMG20B-213ENST00000488973 PRM1P04553 51 aa5.55□□□□□ -1.52
HMG20B-213ENST00000488973 LCE3EQ5T5B0 92 aa5.54□□□□□ -1.52
HMG20B-213ENST00000488973 KRTAP5-5Q701N2 237 aaPredicted RBP5.46□□□□□ -1.54
HMG20B-213ENST00000488973 KRTAP9-7A8MTY7 169 aa5.45□□□□□ -1.54
HMG20B-213ENST00000488973 SPRR2DP22532 72 aa5.44□□□□□ -1.54
HMG20B-213ENST00000488973 KRTAP9-4Q9BYQ2 154 aa5.25□□□□□ -1.57
HMG20B-213ENST00000488973 NEBP20929 6669 aa5.19□□□□□ -1.58
HMG20B-213ENST00000488973 LCE1EQ5T753 118 aa5.18□□□□□ -1.58
HMG20B-213ENST00000488973 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
HMG20B-213ENST00000488973 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
HMG20B-213ENST00000488973 MT3P25713 68 aa5.02□□□□□ -1.61
HMG20B-213ENST00000488973 LCE1DQ5T752 114 aa5.02□□□□□ -1.61
HMG20B-213ENST00000488973 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
HMG20B-213ENST00000488973 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
HMG20B-213ENST00000488973 KRTAP4-6Q9BYQ5 205 aa4.73□□□□□ -1.65
HMG20B-213ENST00000488973 MT4P47944 62 aa4.71□□□□□ -1.66
HMG20B-213ENST00000488973 KRTAP20-1Q3LI63 56 aa4.69□□□□□ -1.66
HMG20B-213ENST00000488973 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
HMG20B-213ENST00000488973 KRTAP5-2Q701N4 177 aa4.61□□□□□ -1.67
HMG20B-213ENST00000488973 HMCN1Q96RW7 5635 aa4.53□□□□□ -1.68
HMG20B-213ENST00000488973 LCE1FQ5T754 118 aa4.5□□□□□ -1.69
HMG20B-213ENST00000488973 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
HMG20B-213ENST00000488973 MUC5ACP98088 5654 aa4.26□□□□□ -1.73
HMG20B-213ENST00000488973 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
HMG20B-213ENST00000488973 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
HMG20B-213ENST00000488973 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
HMG20B-213ENST00000488973 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
HMG20B-213ENST00000488973 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
HMG20B-213ENST00000488973 AHNAK2Q8IVF2 5795 aa3.87□□□□□ -1.79
HMG20B-213ENST00000488973 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
HMG20B-213ENST00000488973 KRTAP5-8O75690 187 aa3.82□□□□□ -1.8
HMG20B-213ENST00000488973 KRTAP5-7Q6L8G8 165 aa3.78□□□□□ -1.8
HMG20B-213ENST00000488973 KRTAP21-1Q3LI58 79 aa3.68□□□□□ -1.82
HMG20B-213ENST00000488973 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
HMG20B-213ENST00000488973 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
HMG20B-213ENST00000488973 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
HMG20B-213ENST00000488973 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
HMG20B-213ENST00000488973 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
HMG20B-213ENST00000488973 KRTAP9-9Q9BYP9 154 aa3.36□□□□□ -1.87
HMG20B-213ENST00000488973 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
HMG20B-213ENST00000488973 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
HMG20B-213ENST00000488973 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
HMG20B-213ENST00000488973 PHGR1C9JFL3 82 aa2.9□□□□□ -1.94
HMG20B-213ENST00000488973 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
HMG20B-213ENST00000488973 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 82.2 ms