RNA–Protein interactions for RNA: ENST00000488964.5

CYTH3-209, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-209ENST00000488964 A6NED7 52 aa5.46□□□□□ -1.54
CYTH3-209ENST00000488964 PCP4P48539 62 aa5.46□□□□□ -1.54
CYTH3-209ENST00000488964 MT1GP13640 62 aa5.44□□□□□ -1.54
CYTH3-209ENST00000488964 KRTAP25-1Q3LHN0 102 aa5.44□□□□□ -1.54
CYTH3-209ENST00000488964 RPS28P62857 69 aaKnown RBP5.43□□□□□ -1.54
CYTH3-209ENST00000488964 MT1LQ93083 61 aa5.36□□□□□ -1.55
CYTH3-209ENST00000488964 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
CYTH3-209ENST00000488964 MT1MQ8N339 61 aa5.32□□□□□ -1.56
CYTH3-209ENST00000488964 SVIPQ8NHG7 77 aa5.32□□□□□ -1.56
CYTH3-209ENST00000488964 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
CYTH3-209ENST00000488964 CDC42SE1Q9NRR8 79 aa5.29□□□□□ -1.56
CYTH3-209ENST00000488964 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
CYTH3-209ENST00000488964 ROMO1P60602 79 aa5.17□□□□□ -1.58
CYTH3-209ENST00000488964 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
CYTH3-209ENST00000488964 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
CYTH3-209ENST00000488964 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
CYTH3-209ENST00000488964 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
CYTH3-209ENST00000488964 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
CYTH3-209ENST00000488964 KRTAP4-7Q9BYR0 210 aa5.04□□□□□ -1.6
CYTH3-209ENST00000488964 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
CYTH3-209ENST00000488964 MT4P47944 62 aa5□□□□□ -1.61
CYTH3-209ENST00000488964 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
CYTH3-209ENST00000488964 H3BS24 57 aa4.93□□□□□ -1.62
CYTH3-209ENST00000488964 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
CYTH3-209ENST00000488964 HMCN1Q96RW7 5635 aa4.91□□□□□ -1.62
CYTH3-209ENST00000488964 GPR98Q8WXG9 6306 aa4.89□□□□□ -1.63
CYTH3-209ENST00000488964 BRK1Q8WUW1 75 aa4.83□□□□□ -1.64
CYTH3-209ENST00000488964 KRTAP5-5Q701N2 237 aaPredicted RBP4.82□□□□□ -1.64
CYTH3-209ENST00000488964 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
CYTH3-209ENST00000488964 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
CYTH3-209ENST00000488964 LOC100996750A0A140TA64 210 aa4.77□□□□□ -1.65
CYTH3-209ENST00000488964 SPRR5A0A1B0GTR4 108 aa4.73□□□□□ -1.65
CYTH3-209ENST00000488964 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
CYTH3-209ENST00000488964 AHNAK2Q8IVF2 5795 aa4.7□□□□□ -1.66
CYTH3-209ENST00000488964 MT1AP04731 61 aa4.6□□□□□ -1.67
CYTH3-209ENST00000488964 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
CYTH3-209ENST00000488964 PMAIP1Q13794 54 aa4.55□□□□□ -1.68
CYTH3-209ENST00000488964 SYNE1Q8NF91 8797 aaKnown RBP4.54□□□□□ -1.68
CYTH3-209ENST00000488964 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
CYTH3-209ENST00000488964 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
CYTH3-209ENST00000488964 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
CYTH3-209ENST00000488964 KRTAP9-4Q9BYQ2 154 aa4.41□□□□□ -1.7
CYTH3-209ENST00000488964 KRTAP5-7Q6L8G8 165 aa4.4□□□□□ -1.71
CYTH3-209ENST00000488964 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
CYTH3-209ENST00000488964 PRO0628Q9UI54 55 aa4.31□□□□□ -1.72
CYTH3-209ENST00000488964 KRTAP6-2Q3LI66 62 aa4.3□□□□□ -1.72
CYTH3-209ENST00000488964 PRAC1Q96KF2 57 aa4.27□□□□□ -1.73
CYTH3-209ENST00000488964 KRTAP4-11Q9BYQ6 195 aa4.27□□□□□ -1.73
CYTH3-209ENST00000488964 MT3P25713 68 aa4.24□□□□□ -1.73
CYTH3-209ENST00000488964 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
CYTH3-209ENST00000488964 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
CYTH3-209ENST00000488964 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
CYTH3-209ENST00000488964 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
CYTH3-209ENST00000488964 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
CYTH3-209ENST00000488964 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
CYTH3-209ENST00000488964 MUC5BQ9HC84 5762 aaPredicted RBP3.85□□□□□ -1.79
CYTH3-209ENST00000488964 AHNAKQ09666 5890 aaKnown RBP3.84□□□□□ -1.79
CYTH3-209ENST00000488964 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
CYTH3-209ENST00000488964 MUC5ACP98088 5654 aa3.84□□□□□ -1.8
CYTH3-209ENST00000488964 LUZP6Q538Z0 58 aa3.78□□□□□ -1.8
CYTH3-209ENST00000488964 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
CYTH3-209ENST00000488964 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
CYTH3-209ENST00000488964 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
CYTH3-209ENST00000488964 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
CYTH3-209ENST00000488964 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
CYTH3-209ENST00000488964 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
CYTH3-209ENST00000488964 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
CYTH3-209ENST00000488964 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
CYTH3-209ENST00000488964 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
CYTH3-209ENST00000488964 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
CYTH3-209ENST00000488964 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
CYTH3-209ENST00000488964 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
CYTH3-209ENST00000488964 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
CYTH3-209ENST00000488964 PRM1P04553 51 aa2.62□□□□□ -1.99
CYTH3-209ENST00000488964 INE1O15225 51 aa2.52□□□□□ -2.01
CYTH3-209ENST00000488964 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
CYTH3-209ENST00000488964 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
CYTH3-209ENST00000488964 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 105.9 ms