RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 Q1T7F1 81 aa7.91□□□□□ -1.14
VAMP2-204ENST00000488857 PSPHP1O15172 72 aa7.85□□□□□ -1.15
VAMP2-204ENST00000488857 K7ERS5 55 aa7.8□□□□□ -1.16
VAMP2-204ENST00000488857 KRTAP12-3P60328 96 aa7.78□□□□□ -1.16
VAMP2-204ENST00000488857 KRTAP25-1Q3LHN0 102 aa7.78□□□□□ -1.16
VAMP2-204ENST00000488857 PCP4P48539 62 aa7.75□□□□□ -1.17
VAMP2-204ENST00000488857 RPS28P62857 69 aaKnown RBP7.7□□□□□ -1.18
VAMP2-204ENST00000488857 KRTAP4-9Q9BYQ8 210 aa7.69□□□□□ -1.18
VAMP2-204ENST00000488857 KRTAP4-3Q9BYR4 195 aa7.69□□□□□ -1.18
VAMP2-204ENST00000488857 LCE4AQ5TA78 99 aa7.62□□□□□ -1.19
VAMP2-204ENST00000488857 A6NED7 52 aa7.59□□□□□ -1.19
VAMP2-204ENST00000488857 LCE1DQ5T752 114 aa7.57□□□□□ -1.2
VAMP2-204ENST00000488857 KRTAP4-7Q9BYR0 210 aa7.56□□□□□ -1.2
VAMP2-204ENST00000488857 KRTAP23-1A1A580 65 aa7.54□□□□□ -1.2
VAMP2-204ENST00000488857 KRTAP5-4Q6L8H1 288 aa7.53□□□□□ -1.2
VAMP2-204ENST00000488857 MT4P47944 62 aa7.46□□□□□ -1.22
VAMP2-204ENST00000488857 HMCN1Q96RW7 5635 aa7.44□□□□□ -1.22
VAMP2-204ENST00000488857 KRTAP19-4Q3LI73 84 aa7.43□□□□□ -1.22
VAMP2-204ENST00000488857 CDC42SE1Q9NRR8 79 aa7.41□□□□□ -1.22
VAMP2-204ENST00000488857 GPR98Q8WXG9 6306 aa7.34□□□□□ -1.23
VAMP2-204ENST00000488857 KRTAP15-1Q3LI76 137 aa7.31□□□□□ -1.24
VAMP2-204ENST00000488857 ROMO1P60602 79 aa7.3□□□□□ -1.24
VAMP2-204ENST00000488857 KRTAP5-5Q701N2 237 aaPredicted RBP7.3□□□□□ -1.24
VAMP2-204ENST00000488857 KRTAP4-6Q9BYQ5 205 aa7.29□□□□□ -1.24
VAMP2-204ENST00000488857 LCE3CQ5T5A8 94 aa7.19□□□□□ -1.26
VAMP2-204ENST00000488857 LOC100996750A0A140TA64 210 aa7.16□□□□□ -1.26
VAMP2-204ENST00000488857 SPRR5A0A1B0GTR4 108 aa7.08□□□□□ -1.28
VAMP2-204ENST00000488857 KRTAP20-2Q3LI61 65 aa7.07□□□□□ -1.28
VAMP2-204ENST00000488857 AHNAK2Q8IVF2 5795 aa7.06□□□□□ -1.28
VAMP2-204ENST00000488857 KRTAP12-4P60329 112 aa7.04□□□□□ -1.28
VAMP2-204ENST00000488857 KRTAP5-10Q6L8G5 202 aa7□□□□□ -1.29
VAMP2-204ENST00000488857 SYNE1Q8NF91 8797 aaKnown RBP6.89□□□□□ -1.31
VAMP2-204ENST00000488857 KRTAP5-3Q6L8H2 238 aa6.88□□□□□ -1.31
VAMP2-204ENST00000488857 MT1AP04731 61 aa6.8□□□□□ -1.32
VAMP2-204ENST00000488857 KRTAP9-6A8MVA2 160 aa6.78□□□□□ -1.32
VAMP2-204ENST00000488857 KRTAP6-1Q3LI64 71 aa6.74□□□□□ -1.33
VAMP2-204ENST00000488857 KRTAP5-7Q6L8G8 165 aa6.72□□□□□ -1.33
VAMP2-204ENST00000488857 BRK1Q8WUW1 75 aa6.7□□□□□ -1.34
VAMP2-204ENST00000488857 KRTAP5-2Q701N4 177 aa6.62□□□□□ -1.35
VAMP2-204ENST00000488857 KRTAP9-4Q9BYQ2 154 aa6.56□□□□□ -1.36
VAMP2-204ENST00000488857 KRTAP4-11Q9BYQ6 195 aa6.42□□□□□ -1.38
VAMP2-204ENST00000488857 KRTAP6-2Q3LI66 62 aa6.41□□□□□ -1.38
VAMP2-204ENST00000488857 PMAIP1Q13794 54 aa6.33□□□□□ -1.4
VAMP2-204ENST00000488857 KRTAP5-8O75690 187 aa6.22□□□□□ -1.41
VAMP2-204ENST00000488857 MT3P25713 68 aa6.21□□□□□ -1.42
VAMP2-204ENST00000488857 OBSCNQ5VST9 7968 aa6.07□□□□□ -1.44
VAMP2-204ENST00000488857 PRO0628Q9UI54 55 aa6.06□□□□□ -1.44
VAMP2-204ENST00000488857 PRAC1Q96KF2 57 aa6.01□□□□□ -1.45
VAMP2-204ENST00000488857 KRTAP5-1Q6L8H4 278 aa5.9□□□□□ -1.46
VAMP2-204ENST00000488857 KRTAP9-9Q9BYP9 154 aa5.85□□□□□ -1.47
VAMP2-204ENST00000488857 MUC5BQ9HC84 5762 aaPredicted RBP5.82□□□□□ -1.48
VAMP2-204ENST00000488857 MUC5ACP98088 5654 aa5.8□□□□□ -1.48
VAMP2-204ENST00000488857 KTN1-AS1Q86SY8 53 aa5.75□□□□□ -1.49
VAMP2-204ENST00000488857 AHNAKQ09666 5890 aaKnown RBP5.73□□□□□ -1.49
VAMP2-204ENST00000488857 LCE1EQ5T753 118 aa5.72□□□□□ -1.49
VAMP2-204ENST00000488857 SVIPQ8NHG7 77 aa5.4□□□□□ -1.54
VAMP2-204ENST00000488857 KRTAP4-2Q9BYR5 136 aa5.37□□□□□ -1.55
VAMP2-204ENST00000488857 LCE1CQ5T751 118 aa5.3□□□□□ -1.56
VAMP2-204ENST00000488857 LCE1BQ5T7P3 118 aa5.3□□□□□ -1.56
VAMP2-204ENST00000488857 LCE3DQ9BYE3 92 aa5.2□□□□□ -1.58
VAMP2-204ENST00000488857 LUZP6Q538Z0 58 aa5.07□□□□□ -1.6
VAMP2-204ENST00000488857 LCE3EQ5T5B0 92 aa4.9□□□□□ -1.63
VAMP2-204ENST00000488857 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.86□□□□□ -1.63
VAMP2-204ENST00000488857 KRTAP5-11Q6L8G4 156 aa4.8□□□□□ -1.64
VAMP2-204ENST00000488857 KRTAP4-12Q9BQ66 201 aa4.76□□□□□ -1.65
VAMP2-204ENST00000488857 LCE1FQ5T754 118 aa4.65□□□□□ -1.67
VAMP2-204ENST00000488857 KRTAP21-2Q3LI59 83 aa4.46□□□□□ -1.7
VAMP2-204ENST00000488857 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
VAMP2-204ENST00000488857 H3BS24 57 aa4.21□□□□□ -1.74
VAMP2-204ENST00000488857 PHGR1C9JFL3 82 aa4.13□□□□□ -1.75
VAMP2-204ENST00000488857 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
VAMP2-204ENST00000488857 A0A0A0MQY5 61 aa3.76□□□□□ -1.81
VAMP2-204ENST00000488857 MUC19Q7Z5P9 8384 aa3.73□□□□□ -1.81
VAMP2-204ENST00000488857 PRM1P04553 51 aa3.72□□□□□ -1.81
VAMP2-204ENST00000488857 INE1O15225 51 aa3.49□□□□□ -1.85
VAMP2-204ENST00000488857 KRTAP21-1Q3LI58 79 aa3.09□□□□□ -1.91
VAMP2-204ENST00000488857 MUC16Q8WXI7 14507 aa2.62□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms