RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 KRTAP5-4Q6L8H1 288 aa6.31□□□□□ -1.4
ATG9A-222ENST00000488833 PRR15LQ9BU68 103 aa6.23□□□□□ -1.41
ATG9A-222ENST00000488833 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
ATG9A-222ENST00000488833 ANAPC13Q9BS18 74 aa6.22□□□□□ -1.41
ATG9A-222ENST00000488833 KRTAP4-7Q9BYR0 210 aa6.18□□□□□ -1.42
ATG9A-222ENST00000488833 KRTAP12-3P60328 96 aa6.17□□□□□ -1.42
ATG9A-222ENST00000488833 KRTAP5-10Q6L8G5 202 aa6.16□□□□□ -1.42
ATG9A-222ENST00000488833 CCDC179H3BU77 68 aa6.11□□□□□ -1.43
ATG9A-222ENST00000488833 ATP5EP56381 51 aaPredicted RBP6.11□□□□□ -1.43
ATG9A-222ENST00000488833 LINC01558Q9Y6Z2 57 aa6.1□□□□□ -1.43
ATG9A-222ENST00000488833 UQCR11O14957 56 aa6□□□□□ -1.45
ATG9A-222ENST00000488833 KRTAP20-2Q3LI61 65 aa5.99□□□□□ -1.45
ATG9A-222ENST00000488833 KRTAP5-3Q6L8H2 238 aa5.98□□□□□ -1.45
ATG9A-222ENST00000488833 KRTAP5-5Q701N2 237 aaPredicted RBP5.98□□□□□ -1.45
ATG9A-222ENST00000488833 KRTAP5-7Q6L8G8 165 aa5.94□□□□□ -1.46
ATG9A-222ENST00000488833 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
ATG9A-222ENST00000488833 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
ATG9A-222ENST00000488833 TMEM258P61165 79 aa5.91□□□□□ -1.46
ATG9A-222ENST00000488833 KRTAP12-4P60329 112 aa5.89□□□□□ -1.47
ATG9A-222ENST00000488833 LOC100996750A0A140TA64 210 aa5.86□□□□□ -1.47
ATG9A-222ENST00000488833 SYNE1Q8NF91 8797 aaKnown RBP5.86□□□□□ -1.47
ATG9A-222ENST00000488833 MIR22HGQ0VDD5 57 aa5.85□□□□□ -1.47
ATG9A-222ENST00000488833 K7ERS5 55 aa5.79□□□□□ -1.48
ATG9A-222ENST00000488833 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
ATG9A-222ENST00000488833 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
ATG9A-222ENST00000488833 KRTAP23-1A1A580 65 aa5.66□□□□□ -1.5
ATG9A-222ENST00000488833 LCE3CQ5T5A8 94 aa5.65□□□□□ -1.5
ATG9A-222ENST00000488833 PSPHP1O15172 72 aa5.63□□□□□ -1.51
ATG9A-222ENST00000488833 V9GYY9 64 aa5.59□□□□□ -1.51
ATG9A-222ENST00000488833 Q1T7F1 81 aa5.57□□□□□ -1.52
ATG9A-222ENST00000488833 MT1AP04731 61 aa5.53□□□□□ -1.52
ATG9A-222ENST00000488833 KRTAP6-1Q3LI64 71 aa5.51□□□□□ -1.53
ATG9A-222ENST00000488833 KRTAP4-11Q9BYQ6 195 aa5.51□□□□□ -1.53
ATG9A-222ENST00000488833 KRTAP5-2Q701N4 177 aa5.5□□□□□ -1.53
ATG9A-222ENST00000488833 CDC42SE1Q9NRR8 79 aa5.45□□□□□ -1.54
ATG9A-222ENST00000488833 A6NED7 52 aa5.44□□□□□ -1.54
ATG9A-222ENST00000488833 AHNAKQ09666 5890 aaKnown RBP5.39□□□□□ -1.55
ATG9A-222ENST00000488833 RPS28P62857 69 aaKnown RBP5.38□□□□□ -1.55
ATG9A-222ENST00000488833 KRTAP9-6A8MVA2 160 aa5.35□□□□□ -1.55
ATG9A-222ENST00000488833 ROMO1P60602 79 aa5.35□□□□□ -1.55
ATG9A-222ENST00000488833 KRTAP9-4Q9BYQ2 154 aa5.34□□□□□ -1.55
ATG9A-222ENST00000488833 KRTAP5-8O75690 187 aa5.32□□□□□ -1.56
ATG9A-222ENST00000488833 MUC5BQ9HC84 5762 aaPredicted RBP5.31□□□□□ -1.56
ATG9A-222ENST00000488833 PCP4P48539 62 aa5.3□□□□□ -1.56
ATG9A-222ENST00000488833 KRTAP6-2Q3LI66 62 aa5.3□□□□□ -1.56
ATG9A-222ENST00000488833 MUC5ACP98088 5654 aa5.29□□□□□ -1.56
ATG9A-222ENST00000488833 OBSCNQ5VST9 7968 aa5.24□□□□□ -1.57
ATG9A-222ENST00000488833 KRTAP9-9Q9BYP9 154 aa5.1□□□□□ -1.59
ATG9A-222ENST00000488833 MT3P25713 68 aa5.06□□□□□ -1.6
ATG9A-222ENST00000488833 KRTAP5-1Q6L8H4 278 aa4.97□□□□□ -1.61
ATG9A-222ENST00000488833 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
ATG9A-222ENST00000488833 BRK1Q8WUW1 75 aa4.63□□□□□ -1.67
ATG9A-222ENST00000488833 LCE1BQ5T7P3 118 aa4.46□□□□□ -1.7
ATG9A-222ENST00000488833 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.7
ATG9A-222ENST00000488833 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
ATG9A-222ENST00000488833 LCE1CQ5T751 118 aa4.34□□□□□ -1.71
ATG9A-222ENST00000488833 PRAC1Q96KF2 57 aa4.16□□□□□ -1.74
ATG9A-222ENST00000488833 KRTAP4-12Q9BQ66 201 aa4.13□□□□□ -1.75
ATG9A-222ENST00000488833 PRO0628Q9UI54 55 aa4.13□□□□□ -1.75
ATG9A-222ENST00000488833 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
ATG9A-222ENST00000488833 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
ATG9A-222ENST00000488833 KTN1-AS1Q86SY8 53 aa3.93□□□□□ -1.78
ATG9A-222ENST00000488833 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
ATG9A-222ENST00000488833 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
ATG9A-222ENST00000488833 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
ATG9A-222ENST00000488833 SVIPQ8NHG7 77 aa3.67□□□□□ -1.82
ATG9A-222ENST00000488833 PHGR1C9JFL3 82 aa3.62□□□□□ -1.83
ATG9A-222ENST00000488833 KRTAP21-2Q3LI59 83 aa3.62□□□□□ -1.83
ATG9A-222ENST00000488833 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
ATG9A-222ENST00000488833 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
ATG9A-222ENST00000488833 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
ATG9A-222ENST00000488833 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
ATG9A-222ENST00000488833 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
ATG9A-222ENST00000488833 PRM1P04553 51 aa2.73□□□□□ -1.97
ATG9A-222ENST00000488833 INE1O15225 51 aa2.35□□□□□ -2.03
ATG9A-222ENST00000488833 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
ATG9A-222ENST00000488833 A0A0A0MQY5 61 aa2.27□□□□□ -2.05
ATG9A-222ENST00000488833 H3BS24 57 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 78 ms