RNA–Protein interactions for RNA: ENST00000488535.2

ABCA2-219, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 3,327 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-219ENST00000488535 SYNE1Q8NF91 8797 aaKnown RBP4.53□□□□□ -1.68
ABCA2-219ENST00000488535 KRTAP2-3P0C7H8 128 aa4.45□□□□□ -1.7
ABCA2-219ENST00000488535 KRTAP2-4Q9BYR9 128 aa4.45□□□□□ -1.7
ABCA2-219ENST00000488535 KRTAP2-1Q9BYU5 128 aa4.45□□□□□ -1.7
ABCA2-219ENST00000488535 MDN1Q9NU22 5596 aa4.44□□□□□ -1.7
ABCA2-219ENST00000488535 LOC100996750A0A140TA64 210 aa4.43□□□□□ -1.7
ABCA2-219ENST00000488535 KRTAP19-6Q3LI70 58 aa4.42□□□□□ -1.7
ABCA2-219ENST00000488535 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.7
ABCA2-219ENST00000488535 KRTAP9-2Q9BYQ4 174 aa4.4□□□□□ -1.71
ABCA2-219ENST00000488535 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
ABCA2-219ENST00000488535 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
ABCA2-219ENST00000488535 MT1GP13640 62 aa4.33□□□□□ -1.72
ABCA2-219ENST00000488535 MT1EP04732 61 aa4.3□□□□□ -1.72
ABCA2-219ENST00000488535 MT1LQ93083 61 aa4.3□□□□□ -1.72
ABCA2-219ENST00000488535 LCE2DQ5TA82 110 aaPredicted RBP4.29□□□□□ -1.72
ABCA2-219ENST00000488535 SPRR2FQ96RM1 72 aa4.26□□□□□ -1.73
ABCA2-219ENST00000488535 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.73
ABCA2-219ENST00000488535 LCE3BQ5TA77 95 aa4.2□□□□□ -1.74
ABCA2-219ENST00000488535 KRTAP19-3Q7Z4W3 81 aa4.1□□□□□ -1.75
ABCA2-219ENST00000488535 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.75
ABCA2-219ENST00000488535 MT1MQ8N339 61 aa4.06□□□□□ -1.76
ABCA2-219ENST00000488535 KRTAP9-7A8MTY7 169 aa3.97□□□□□ -1.77
ABCA2-219ENST00000488535 PRM1P04553 51 aa3.95□□□□□ -1.78
ABCA2-219ENST00000488535 LCE5AQ5TCM9 118 aa3.93□□□□□ -1.78
ABCA2-219ENST00000488535 SPRR2EP22531 72 aa3.93□□□□□ -1.78
ABCA2-219ENST00000488535 SPRR2BP35325 72 aa3.93□□□□□ -1.78
ABCA2-219ENST00000488535 SPRR2AP35326 72 aa3.93□□□□□ -1.78
ABCA2-219ENST00000488535 KRTAP9-6A0A140TA67 174 aa3.92□□□□□ -1.78
ABCA2-219ENST00000488535 LCE3DQ9BYE3 92 aa3.87□□□□□ -1.79
ABCA2-219ENST00000488535 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
ABCA2-219ENST00000488535 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.85□□□□□ -1.79
ABCA2-219ENST00000488535 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
ABCA2-219ENST00000488535 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
ABCA2-219ENST00000488535 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
ABCA2-219ENST00000488535 SPRR2DP22532 72 aa3.75□□□□□ -1.81
ABCA2-219ENST00000488535 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
ABCA2-219ENST00000488535 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
ABCA2-219ENST00000488535 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
ABCA2-219ENST00000488535 NEBP20929 6669 aa3.63□□□□□ -1.83
ABCA2-219ENST00000488535 MT1AP04731 61 aa3.59□□□□□ -1.84
ABCA2-219ENST00000488535 MT4P47944 62 aa3.54□□□□□ -1.84
ABCA2-219ENST00000488535 KRTAP2-2Q9BYT5 123 aa3.38□□□□□ -1.87
ABCA2-219ENST00000488535 KRTAP9-4Q9BYQ2 154 aa3.37□□□□□ -1.87
ABCA2-219ENST00000488535 KRTAP4-6Q9BYQ5 205 aa3.37□□□□□ -1.87
ABCA2-219ENST00000488535 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
ABCA2-219ENST00000488535 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
ABCA2-219ENST00000488535 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
ABCA2-219ENST00000488535 MT3P25713 68 aa3.27□□□□□ -1.89
ABCA2-219ENST00000488535 KRTAP20-1Q3LI63 56 aa3.17□□□□□ -1.9
ABCA2-219ENST00000488535 LCE1DQ5T752 114 aa3.17□□□□□ -1.9
ABCA2-219ENST00000488535 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.9
ABCA2-219ENST00000488535 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
ABCA2-219ENST00000488535 LCE4AQ5TA78 99 aa3.09□□□□□ -1.91
ABCA2-219ENST00000488535 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
ABCA2-219ENST00000488535 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
ABCA2-219ENST00000488535 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
ABCA2-219ENST00000488535 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
ABCA2-219ENST00000488535 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
ABCA2-219ENST00000488535 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
ABCA2-219ENST00000488535 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
ABCA2-219ENST00000488535 GPR98Q8WXG9 6306 aa2.74□□□□□ -1.97
ABCA2-219ENST00000488535 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
ABCA2-219ENST00000488535 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
ABCA2-219ENST00000488535 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
ABCA2-219ENST00000488535 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
ABCA2-219ENST00000488535 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2
ABCA2-219ENST00000488535 KRTAP4-12Q9BQ66 201 aa2.52□□□□□ -2.01
ABCA2-219ENST00000488535 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
ABCA2-219ENST00000488535 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
ABCA2-219ENST00000488535 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
ABCA2-219ENST00000488535 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
ABCA2-219ENST00000488535 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
ABCA2-219ENST00000488535 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
ABCA2-219ENST00000488535 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
ABCA2-219ENST00000488535 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
ABCA2-219ENST00000488535 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
ABCA2-219ENST00000488535 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
ABCA2-219ENST00000488535 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 12.6 ms