RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 MT1LQ93083 61 aa4.75□□□□□ -1.65
COL16A1-214ENST00000488128 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
COL16A1-214ENST00000488128 MUC12Q9UKN1 5478 aa4.74□□□□□ -1.65
COL16A1-214ENST00000488128 KRTAP4-3Q9BYR4 195 aa4.72□□□□□ -1.65
COL16A1-214ENST00000488128 CRCT1Q9UGL9 99 aa4.72□□□□□ -1.65
COL16A1-214ENST00000488128 MT1EP04732 61 aa4.72□□□□□ -1.65
COL16A1-214ENST00000488128 KRTAP19-6Q3LI70 58 aa4.69□□□□□ -1.66
COL16A1-214ENST00000488128 MT1GP13640 62 aa4.63□□□□□ -1.67
COL16A1-214ENST00000488128 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
COL16A1-214ENST00000488128 KRTAP12-4P60329 112 aa4.59□□□□□ -1.67
COL16A1-214ENST00000488128 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
COL16A1-214ENST00000488128 KRTAP19-4Q3LI73 84 aa4.5□□□□□ -1.69
COL16A1-214ENST00000488128 KRTAP9-2Q9BYQ4 174 aa4.49□□□□□ -1.69
COL16A1-214ENST00000488128 KRTAP4-9Q9BYQ8 210 aa4.45□□□□□ -1.7
COL16A1-214ENST00000488128 MT1MQ8N339 61 aa4.42□□□□□ -1.7
COL16A1-214ENST00000488128 KRTAP19-3Q7Z4W3 81 aa4.42□□□□□ -1.7
COL16A1-214ENST00000488128 LCE3BQ5TA77 95 aa4.4□□□□□ -1.71
COL16A1-214ENST00000488128 MACF1Q9UPN3 7388 aaKnown RBP4.39□□□□□ -1.71
COL16A1-214ENST00000488128 SPRR2FQ96RM1 72 aa4.37□□□□□ -1.71
COL16A1-214ENST00000488128 SYNE2Q8WXH0 6885 aaKnown RBP4.34□□□□□ -1.71
COL16A1-214ENST00000488128 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
COL16A1-214ENST00000488128 MDN1Q9NU22 5596 aa4.27□□□□□ -1.73
COL16A1-214ENST00000488128 KRTAP9-7A8MTY7 169 aa4.19□□□□□ -1.74
COL16A1-214ENST00000488128 KRTAP5-9P26371 169 aa4.14□□□□□ -1.75
COL16A1-214ENST00000488128 KRTAP9-6A0A140TA67 174 aa4.13□□□□□ -1.75
COL16A1-214ENST00000488128 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
COL16A1-214ENST00000488128 PRM1P04553 51 aa4.11□□□□□ -1.75
COL16A1-214ENST00000488128 LCE3DQ9BYE3 92 aa4.1□□□□□ -1.75
COL16A1-214ENST00000488128 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
COL16A1-214ENST00000488128 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
COL16A1-214ENST00000488128 LCE1AQ5T7P2 110 aa4.04□□□□□ -1.76
COL16A1-214ENST00000488128 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.03□□□□□ -1.76
COL16A1-214ENST00000488128 KRTAP6-3Q3LI67 103 aa4.03□□□□□ -1.76
COL16A1-214ENST00000488128 LCE4AQ5TA78 99 aa4.02□□□□□ -1.77
COL16A1-214ENST00000488128 MT1AP04731 61 aa3.99□□□□□ -1.77
COL16A1-214ENST00000488128 SPRR2EP22531 72 aa3.97□□□□□ -1.77
COL16A1-214ENST00000488128 SPRR2BP35325 72 aa3.97□□□□□ -1.77
COL16A1-214ENST00000488128 SPRR2AP35326 72 aa3.97□□□□□ -1.77
COL16A1-214ENST00000488128 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
COL16A1-214ENST00000488128 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
COL16A1-214ENST00000488128 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
COL16A1-214ENST00000488128 SPRR2DP22532 72 aa3.79□□□□□ -1.8
COL16A1-214ENST00000488128 NEBP20929 6669 aa3.61□□□□□ -1.83
COL16A1-214ENST00000488128 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
COL16A1-214ENST00000488128 MT3P25713 68 aa3.54□□□□□ -1.84
COL16A1-214ENST00000488128 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
COL16A1-214ENST00000488128 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
COL16A1-214ENST00000488128 KRTAP4-6Q9BYQ5 205 aa3.42□□□□□ -1.86
COL16A1-214ENST00000488128 MT4P47944 62 aa3.42□□□□□ -1.86
COL16A1-214ENST00000488128 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
COL16A1-214ENST00000488128 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
COL16A1-214ENST00000488128 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
COL16A1-214ENST00000488128 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.89
COL16A1-214ENST00000488128 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
COL16A1-214ENST00000488128 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
COL16A1-214ENST00000488128 LCE1DQ5T752 114 aa3.18□□□□□ -1.9
COL16A1-214ENST00000488128 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
COL16A1-214ENST00000488128 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
COL16A1-214ENST00000488128 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
COL16A1-214ENST00000488128 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
COL16A1-214ENST00000488128 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
COL16A1-214ENST00000488128 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
COL16A1-214ENST00000488128 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
COL16A1-214ENST00000488128 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
COL16A1-214ENST00000488128 LCE1CQ5T751 118 aa2.71□□□□□ -1.97
COL16A1-214ENST00000488128 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
COL16A1-214ENST00000488128 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
COL16A1-214ENST00000488128 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
COL16A1-214ENST00000488128 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
COL16A1-214ENST00000488128 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
COL16A1-214ENST00000488128 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
COL16A1-214ENST00000488128 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
COL16A1-214ENST00000488128 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
COL16A1-214ENST00000488128 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
COL16A1-214ENST00000488128 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
COL16A1-214ENST00000488128 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
COL16A1-214ENST00000488128 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
COL16A1-214ENST00000488128 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 88 ms