RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 DSTQ03001 7570 aaKnown RBP8.47□□□□□ -1.05
RHBDD3-205ENST00000488106 MT1LQ93083 61 aa8.44□□□□□ -1.06
RHBDD3-205ENST00000488106 K7ERS5 55 aa8.43□□□□□ -1.06
RHBDD3-205ENST00000488106 PP632Q6XCG6 107 aa8.43□□□□□ -1.06
RHBDD3-205ENST00000488106 MT1MQ8N339 61 aa8.38□□□□□ -1.07
RHBDD3-205ENST00000488106 A6NED7 52 aa8.3□□□□□ -1.08
RHBDD3-205ENST00000488106 KRTAP12-3P60328 96 aa8.29□□□□□ -1.08
RHBDD3-205ENST00000488106 KRTAP25-1Q3LHN0 102 aa8.29□□□□□ -1.08
RHBDD3-205ENST00000488106 KRTAP4-9Q9BYQ8 210 aa8.24□□□□□ -1.09
RHBDD3-205ENST00000488106 KRTAP4-3Q9BYR4 195 aa8.2□□□□□ -1.1
RHBDD3-205ENST00000488106 RPS28P62857 69 aaKnown RBP8.19□□□□□ -1.1
RHBDD3-205ENST00000488106 KRTAP4-7Q9BYR0 210 aa8.08□□□□□ -1.12
RHBDD3-205ENST00000488106 CDC42SE1Q9NRR8 79 aa8.02□□□□□ -1.13
RHBDD3-205ENST00000488106 LCE1DQ5T752 114 aa7.97□□□□□ -1.13
RHBDD3-205ENST00000488106 GPR98Q8WXG9 6306 aa7.96□□□□□ -1.14
RHBDD3-205ENST00000488106 LCE4AQ5TA78 99 aa7.95□□□□□ -1.14
RHBDD3-205ENST00000488106 KRTAP23-1A1A580 65 aa7.94□□□□□ -1.14
RHBDD3-205ENST00000488106 MT4P47944 62 aa7.92□□□□□ -1.14
RHBDD3-205ENST00000488106 ROMO1P60602 79 aa7.89□□□□□ -1.15
RHBDD3-205ENST00000488106 HMCN1Q96RW7 5635 aa7.85□□□□□ -1.15
RHBDD3-205ENST00000488106 KRTAP5-4Q6L8H1 288 aa7.84□□□□□ -1.15
RHBDD3-205ENST00000488106 KRTAP15-1Q3LI76 137 aa7.79□□□□□ -1.16
RHBDD3-205ENST00000488106 KRTAP19-4Q3LI73 84 aa7.71□□□□□ -1.18
RHBDD3-205ENST00000488106 KRTAP4-6Q9BYQ5 205 aa7.68□□□□□ -1.18
RHBDD3-205ENST00000488106 LOC100996750A0A140TA64 210 aa7.64□□□□□ -1.19
RHBDD3-205ENST00000488106 LCE3CQ5T5A8 94 aa7.64□□□□□ -1.19
RHBDD3-205ENST00000488106 KRTAP5-5Q701N2 237 aaPredicted RBP7.64□□□□□ -1.19
RHBDD3-205ENST00000488106 AHNAK2Q8IVF2 5795 aa7.55□□□□□ -1.2
RHBDD3-205ENST00000488106 KRTAP20-2Q3LI61 65 aa7.42□□□□□ -1.22
RHBDD3-205ENST00000488106 KRTAP5-10Q6L8G5 202 aa7.42□□□□□ -1.22
RHBDD3-205ENST00000488106 KRTAP12-4P60329 112 aa7.4□□□□□ -1.22
RHBDD3-205ENST00000488106 SPRR5A0A1B0GTR4 108 aa7.37□□□□□ -1.23
RHBDD3-205ENST00000488106 SYNE1Q8NF91 8797 aaKnown RBP7.34□□□□□ -1.23
RHBDD3-205ENST00000488106 BRK1Q8WUW1 75 aa7.33□□□□□ -1.24
RHBDD3-205ENST00000488106 KRTAP5-3Q6L8H2 238 aa7.24□□□□□ -1.25
RHBDD3-205ENST00000488106 KRTAP9-6A8MVA2 160 aa7.22□□□□□ -1.25
RHBDD3-205ENST00000488106 MT1AP04731 61 aa7.18□□□□□ -1.26
RHBDD3-205ENST00000488106 KRTAP6-1Q3LI64 71 aa7.15□□□□□ -1.26
RHBDD3-205ENST00000488106 KRTAP5-7Q6L8G8 165 aa7.12□□□□□ -1.27
RHBDD3-205ENST00000488106 PRO0628Q9UI54 55 aa7.01□□□□□ -1.29
RHBDD3-205ENST00000488106 KRTAP5-2Q701N4 177 aa6.91□□□□□ -1.3
RHBDD3-205ENST00000488106 KRTAP9-4Q9BYQ2 154 aa6.91□□□□□ -1.3
RHBDD3-205ENST00000488106 PMAIP1Q13794 54 aa6.85□□□□□ -1.31
RHBDD3-205ENST00000488106 KRTAP6-2Q3LI66 62 aa6.79□□□□□ -1.32
RHBDD3-205ENST00000488106 KRTAP4-11Q9BYQ6 195 aa6.71□□□□□ -1.34
RHBDD3-205ENST00000488106 SVIPQ8NHG7 77 aa6.7□□□□□ -1.34
RHBDD3-205ENST00000488106 PRAC1Q96KF2 57 aa6.62□□□□□ -1.35
RHBDD3-205ENST00000488106 MT3P25713 68 aa6.54□□□□□ -1.36
RHBDD3-205ENST00000488106 KRTAP5-8O75690 187 aa6.48□□□□□ -1.37
RHBDD3-205ENST00000488106 OBSCNQ5VST9 7968 aa6.47□□□□□ -1.37
RHBDD3-205ENST00000488106 KTN1-AS1Q86SY8 53 aa6.46□□□□□ -1.38
RHBDD3-205ENST00000488106 AHNAKQ09666 5890 aaKnown RBP6.19□□□□□ -1.42
RHBDD3-205ENST00000488106 MUC5ACP98088 5654 aa6.17□□□□□ -1.42
RHBDD3-205ENST00000488106 KRTAP9-9Q9BYP9 154 aa6.17□□□□□ -1.42
RHBDD3-205ENST00000488106 MUC5BQ9HC84 5762 aaPredicted RBP6.16□□□□□ -1.42
RHBDD3-205ENST00000488106 KRTAP5-1Q6L8H4 278 aa6.15□□□□□ -1.42
RHBDD3-205ENST00000488106 LCE1EQ5T753 118 aa5.93□□□□□ -1.46
RHBDD3-205ENST00000488106 LCE1BQ5T7P3 118 aa5.66□□□□□ -1.5
RHBDD3-205ENST00000488106 KRTAP4-2Q9BYR5 136 aa5.63□□□□□ -1.51
RHBDD3-205ENST00000488106 LCE3DQ9BYE3 92 aa5.54□□□□□ -1.52
RHBDD3-205ENST00000488106 LUZP6Q538Z0 58 aa5.53□□□□□ -1.52
RHBDD3-205ENST00000488106 LCE1CQ5T751 118 aa5.52□□□□□ -1.53
RHBDD3-205ENST00000488106 LCE3EQ5T5B0 92 aa5.24□□□□□ -1.57
RHBDD3-205ENST00000488106 KRTAP4-12Q9BQ66 201 aa5.12□□□□□ -1.59
RHBDD3-205ENST00000488106 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.04□□□□□ -1.6
RHBDD3-205ENST00000488106 KRTAP5-11Q6L8G4 156 aa5□□□□□ -1.61
RHBDD3-205ENST00000488106 NDUFAF8A1L188 74 aa4.99□□□□□ -1.61
RHBDD3-205ENST00000488106 LCE1FQ5T754 118 aa4.78□□□□□ -1.64
RHBDD3-205ENST00000488106 KRTAP21-2Q3LI59 83 aa4.68□□□□□ -1.66
RHBDD3-205ENST00000488106 H3BS24 57 aa4.56□□□□□ -1.68
RHBDD3-205ENST00000488106 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
RHBDD3-205ENST00000488106 PHGR1C9JFL3 82 aa4.37□□□□□ -1.71
RHBDD3-205ENST00000488106 KRTAP4-4Q9BYR3 166 aa4.32□□□□□ -1.72
RHBDD3-205ENST00000488106 INE1O15225 51 aa4.22□□□□□ -1.73
RHBDD3-205ENST00000488106 PRM1P04553 51 aa4.07□□□□□ -1.76
RHBDD3-205ENST00000488106 MUC19Q7Z5P9 8384 aa3.97□□□□□ -1.77
RHBDD3-205ENST00000488106 KRTAP21-1Q3LI58 79 aa3.26□□□□□ -1.89
RHBDD3-205ENST00000488106 MUC16Q8WXI7 14507 aa2.86□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 7.9 ms