RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 MT1EP04732 61 aa7.34□□□□□ -1.23
PHF1-209ENST00000487667 SYNE2Q8WXH0 6885 aaKnown RBP7.32□□□□□ -1.24
PHF1-209ENST00000487667 LCE3CQ5T5A8 94 aa7.27□□□□□ -1.25
PHF1-209ENST00000487667 KRTAP6-3Q3LI67 103 aa7.23□□□□□ -1.25
PHF1-209ENST00000487667 MT1LQ93083 61 aa7.22□□□□□ -1.25
PHF1-209ENST00000487667 SPRR2FQ96RM1 72 aa7.17□□□□□ -1.26
PHF1-209ENST00000487667 KRTAP5-9P26371 169 aa7.1□□□□□ -1.27
PHF1-209ENST00000487667 KRTAP19-3Q7Z4W3 81 aa7.05□□□□□ -1.28
PHF1-209ENST00000487667 MT1GP13640 62 aa7.04□□□□□ -1.28
PHF1-209ENST00000487667 MUC12Q9UKN1 5478 aa7.04□□□□□ -1.28
PHF1-209ENST00000487667 MT1MQ8N339 61 aa6.9□□□□□ -1.3
PHF1-209ENST00000487667 KRTAP4-7Q9BYR0 210 aa6.9□□□□□ -1.3
PHF1-209ENST00000487667 LCE5AQ5TCM9 118 aa6.89□□□□□ -1.31
PHF1-209ENST00000487667 NEBP20929 6669 aa6.88□□□□□ -1.31
PHF1-209ENST00000487667 MDN1Q9NU22 5596 aa6.86□□□□□ -1.31
PHF1-209ENST00000487667 SPRR2EP22531 72 aa6.86□□□□□ -1.31
PHF1-209ENST00000487667 SPRR2BP35325 72 aa6.86□□□□□ -1.31
PHF1-209ENST00000487667 SPRR2AP35326 72 aa6.86□□□□□ -1.31
PHF1-209ENST00000487667 LCE1AQ5T7P2 110 aa6.86□□□□□ -1.31
PHF1-209ENST00000487667 INE1O15225 51 aa6.8□□□□□ -1.32
PHF1-209ENST00000487667 KRTAP9-6A8MVA2 160 aa6.77□□□□□ -1.33
PHF1-209ENST00000487667 KRTAP20-1Q3LI63 56 aa6.67□□□□□ -1.34
PHF1-209ENST00000487667 KRTAP4-3Q9BYR4 195 aa6.66□□□□□ -1.34
PHF1-209ENST00000487667 SPRR2DP22532 72 aa6.6□□□□□ -1.35
PHF1-209ENST00000487667 KRTAP2-3P0C7H8 128 aa6.53□□□□□ -1.36
PHF1-209ENST00000487667 KRTAP2-4Q9BYR9 128 aa6.53□□□□□ -1.36
PHF1-209ENST00000487667 KRTAP2-1Q9BYU5 128 aa6.53□□□□□ -1.36
PHF1-209ENST00000487667 LOC100996750A0A140TA64 210 aa6.48□□□□□ -1.37
PHF1-209ENST00000487667 DSTQ03001 7570 aaKnown RBP6.47□□□□□ -1.37
PHF1-209ENST00000487667 LCE3BQ5TA77 95 aa6.36□□□□□ -1.39
PHF1-209ENST00000487667 KRTAP2-2Q9BYT5 123 aa6.3□□□□□ -1.4
PHF1-209ENST00000487667 KRTAP5-5Q701N2 237 aaPredicted RBP6.21□□□□□ -1.42
PHF1-209ENST00000487667 MT1AP04731 61 aa6.17□□□□□ -1.42
PHF1-209ENST00000487667 KRTAP6-1Q3LI64 71 aa6.04□□□□□ -1.44
PHF1-209ENST00000487667 KRTAP5-4Q6L8H1 288 aa5.88□□□□□ -1.47
PHF1-209ENST00000487667 KRTAP9-4Q9BYQ2 154 aa5.84□□□□□ -1.47
PHF1-209ENST00000487667 LCE4AQ5TA78 99 aa5.83□□□□□ -1.48
PHF1-209ENST00000487667 KRTAP4-9Q9BYQ8 210 aa5.81□□□□□ -1.48
PHF1-209ENST00000487667 KRTAP12-4P60329 112 aa5.8□□□□□ -1.48
PHF1-209ENST00000487667 MT4P47944 62 aa5.76□□□□□ -1.49
PHF1-209ENST00000487667 SYNE1Q8NF91 8797 aaKnown RBP5.76□□□□□ -1.49
PHF1-209ENST00000487667 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
PHF1-209ENST00000487667 LCE1DQ5T752 114 aa5.68□□□□□ -1.5
PHF1-209ENST00000487667 MT3P25713 68 aa5.62□□□□□ -1.51
PHF1-209ENST00000487667 HMCN1Q96RW7 5635 aa5.56□□□□□ -1.52
PHF1-209ENST00000487667 KRTAP6-2Q3LI66 62 aa5.55□□□□□ -1.52
PHF1-209ENST00000487667 KRTAP20-2Q3LI61 65 aa5.53□□□□□ -1.52
PHF1-209ENST00000487667 GPR98Q8WXG9 6306 aa5.51□□□□□ -1.53
PHF1-209ENST00000487667 LCE3DQ9BYE3 92 aa5.5□□□□□ -1.53
PHF1-209ENST00000487667 LCE3EQ5T5B0 92 aa5.38□□□□□ -1.55
PHF1-209ENST00000487667 KRTAP5-2Q701N4 177 aa5.35□□□□□ -1.55
PHF1-209ENST00000487667 KRTAP5-3Q6L8H2 238 aa5.33□□□□□ -1.56
PHF1-209ENST00000487667 AHNAK2Q8IVF2 5795 aa5.32□□□□□ -1.56
PHF1-209ENST00000487667 KRTAP5-10Q6L8G5 202 aa5.29□□□□□ -1.56
PHF1-209ENST00000487667 KRTAP5-7Q6L8G8 165 aa5.05□□□□□ -1.6
PHF1-209ENST00000487667 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
PHF1-209ENST00000487667 PRM1P04553 51 aa4.95□□□□□ -1.62
PHF1-209ENST00000487667 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
PHF1-209ENST00000487667 KRTAP4-11Q9BYQ6 195 aa4.85□□□□□ -1.63
PHF1-209ENST00000487667 KRTAP5-8O75690 187 aa4.66□□□□□ -1.66
PHF1-209ENST00000487667 KRTAP5-1Q6L8H4 278 aa4.62□□□□□ -1.67
PHF1-209ENST00000487667 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
PHF1-209ENST00000487667 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
PHF1-209ENST00000487667 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
PHF1-209ENST00000487667 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
PHF1-209ENST00000487667 MUC5BQ9HC84 5762 aaPredicted RBP4.35□□□□□ -1.71
PHF1-209ENST00000487667 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
PHF1-209ENST00000487667 AHNAKQ09666 5890 aaKnown RBP4.27□□□□□ -1.73
PHF1-209ENST00000487667 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.25□□□□□ -1.73
PHF1-209ENST00000487667 KRTAP21-2Q3LI59 83 aa3.96□□□□□ -1.78
PHF1-209ENST00000487667 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
PHF1-209ENST00000487667 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
PHF1-209ENST00000487667 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
PHF1-209ENST00000487667 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
PHF1-209ENST00000487667 PHGR1C9JFL3 82 aa3.38□□□□□ -1.87
PHF1-209ENST00000487667 KRTAP21-1Q3LI58 79 aa3.17□□□□□ -1.9
PHF1-209ENST00000487667 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
PHF1-209ENST00000487667 MUC16Q8WXI7 14507 aa2.17□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 135 ms