RNA–Protein interactions for RNA: ENST00000487620.1

ZNF3-215, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-215ENST00000487620 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.34□□□□□ -1.87
ZNF3-215ENST00000487620 MT1LQ93083 61 aa3.34□□□□□ -1.87
ZNF3-215ENST00000487620 MT1EP04732 61 aa3.32□□□□□ -1.88
ZNF3-215ENST00000487620 KRTAP9-7A8MTY7 169 aa3.32□□□□□ -1.88
ZNF3-215ENST00000487620 SSPOA2VEC9 5147 aa3.31□□□□□ -1.88
ZNF3-215ENST00000487620 KRTAP19-4Q3LI73 84 aa3.28□□□□□ -1.88
ZNF3-215ENST00000487620 FCGBPQ9Y6R7 5405 aaPredicted RBP3.25□□□□□ -1.89
ZNF3-215ENST00000487620 LOC100996750A0A140TA64 210 aa3.22□□□□□ -1.89
ZNF3-215ENST00000487620 KRTAP19-6Q3LI70 58 aa3.22□□□□□ -1.89
ZNF3-215ENST00000487620 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
ZNF3-215ENST00000487620 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
ZNF3-215ENST00000487620 MACF1Q9UPN3 7388 aaKnown RBP3.19□□□□□ -1.9
ZNF3-215ENST00000487620 MT1GP13640 62 aa3.17□□□□□ -1.9
ZNF3-215ENST00000487620 SYNE2Q8WXH0 6885 aaKnown RBP3.13□□□□□ -1.91
ZNF3-215ENST00000487620 DSTQ03001 7570 aaKnown RBP3.13□□□□□ -1.91
ZNF3-215ENST00000487620 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
ZNF3-215ENST00000487620 MT1MQ8N339 61 aa3.11□□□□□ -1.91
ZNF3-215ENST00000487620 KRTAP19-3Q7Z4W3 81 aa3.09□□□□□ -1.91
ZNF3-215ENST00000487620 KRTAP12-4P60329 112 aa3.06□□□□□ -1.92
ZNF3-215ENST00000487620 LCE3BQ5TA77 95 aa2.97□□□□□ -1.93
ZNF3-215ENST00000487620 SPRR2FQ96RM1 72 aa2.97□□□□□ -1.93
ZNF3-215ENST00000487620 NEBP20929 6669 aa2.96□□□□□ -1.94
ZNF3-215ENST00000487620 LCE5AQ5TCM9 118 aa2.96□□□□□ -1.94
ZNF3-215ENST00000487620 KRTAP5-9P26371 169 aa2.94□□□□□ -1.94
ZNF3-215ENST00000487620 KRTAP4-9Q9BYQ8 210 aa2.93□□□□□ -1.94
ZNF3-215ENST00000487620 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
ZNF3-215ENST00000487620 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.94
ZNF3-215ENST00000487620 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
ZNF3-215ENST00000487620 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
ZNF3-215ENST00000487620 MT1AP04731 61 aa2.83□□□□□ -1.96
ZNF3-215ENST00000487620 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
ZNF3-215ENST00000487620 SPRR2EP22531 72 aa2.8□□□□□ -1.96
ZNF3-215ENST00000487620 SPRR2BP35325 72 aa2.8□□□□□ -1.96
ZNF3-215ENST00000487620 SPRR2AP35326 72 aa2.8□□□□□ -1.96
ZNF3-215ENST00000487620 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
ZNF3-215ENST00000487620 LCE1AQ5T7P2 110 aa2.76□□□□□ -1.97
ZNF3-215ENST00000487620 PRM1P04553 51 aa2.72□□□□□ -1.97
ZNF3-215ENST00000487620 KRTAP5-5Q701N2 237 aaPredicted RBP2.72□□□□□ -1.97
ZNF3-215ENST00000487620 KRTAP2-2Q9BYT5 123 aa2.72□□□□□ -1.97
ZNF3-215ENST00000487620 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
ZNF3-215ENST00000487620 SPRR2DP22532 72 aa2.7□□□□□ -1.98
ZNF3-215ENST00000487620 KRTAP9-4Q9BYQ2 154 aa2.62□□□□□ -1.99
ZNF3-215ENST00000487620 KRTAP6-2Q3LI66 62 aa2.6□□□□□ -1.99
ZNF3-215ENST00000487620 KRTAP4-6Q9BYQ5 205 aa2.51□□□□□ -2.01
ZNF3-215ENST00000487620 MT3P25713 68 aa2.51□□□□□ -2.01
ZNF3-215ENST00000487620 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
ZNF3-215ENST00000487620 LCE1DQ5T752 114 aa2.41□□□□□ -2.02
ZNF3-215ENST00000487620 LCE4AQ5TA78 99 aa2.39□□□□□ -2.03
ZNF3-215ENST00000487620 MT4P47944 62 aa2.37□□□□□ -2.03
ZNF3-215ENST00000487620 KRTAP5-4Q6L8H1 288 aa2.35□□□□□ -2.03
ZNF3-215ENST00000487620 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
ZNF3-215ENST00000487620 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.04
ZNF3-215ENST00000487620 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
ZNF3-215ENST00000487620 KRTAP5-3Q6L8H2 238 aa2.21□□□□□ -2.06
ZNF3-215ENST00000487620 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.06
ZNF3-215ENST00000487620 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
ZNF3-215ENST00000487620 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
ZNF3-215ENST00000487620 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
ZNF3-215ENST00000487620 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
ZNF3-215ENST00000487620 KRTAP4-11Q9BYQ6 195 aa2.05□□□□□ -2.08
ZNF3-215ENST00000487620 LCE1EQ5T753 118 aa2.02□□□□□ -2.09
ZNF3-215ENST00000487620 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
ZNF3-215ENST00000487620 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
ZNF3-215ENST00000487620 KRTAP4-12Q9BQ66 201 aa1.93□□□□□ -2.1
ZNF3-215ENST00000487620 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
ZNF3-215ENST00000487620 KRTAP9-9Q9BYP9 154 aa1.91□□□□□ -2.1
ZNF3-215ENST00000487620 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
ZNF3-215ENST00000487620 KRTAP4-2Q9BYR5 136 aa1.91□□□□□ -2.1
ZNF3-215ENST00000487620 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
ZNF3-215ENST00000487620 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
ZNF3-215ENST00000487620 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.77□□□□□ -2.13
ZNF3-215ENST00000487620 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
ZNF3-215ENST00000487620 KRTAP4-4Q9BYR3 166 aa1.73□□□□□ -2.13
ZNF3-215ENST00000487620 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
ZNF3-215ENST00000487620 KRTAP5-11Q6L8G4 156 aa1.61□□□□□ -2.15
ZNF3-215ENST00000487620 LCE1FQ5T754 118 aa1.51□□□□□ -2.17
ZNF3-215ENST00000487620 PHGR1C9JFL3 82 aa1.4□□□□□ -2.19
ZNF3-215ENST00000487620 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 100.4 ms