RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 LINC01558Q9Y6Z2 57 aa1.15□□□□□ -2.23
LINC00888-204ENST00000487386 Q1T7F1 81 aa1.14□□□□□ -2.23
LINC00888-204ENST00000487386 Q5VV11 94 aa1.14□□□□□ -2.23
LINC00888-204ENST00000487386 CSAG1Q6PB30 78 aa1.14□□□□□ -2.23
LINC00888-204ENST00000487386 M0QZ58 72 aa1.13□□□□□ -2.23
LINC00888-204ENST00000487386 MT1HP80294 61 aa1.13□□□□□ -2.23
LINC00888-204ENST00000487386 KRTAP19-2Q3LHN2 52 aa1.13□□□□□ -2.23
LINC00888-204ENST00000487386 FAT4Q6V0I7 4981 aa1.12□□□□□ -2.23
LINC00888-204ENST00000487386 UQCR11O14957 56 aa1.12□□□□□ -2.23
LINC00888-204ENST00000487386 MIR22HGQ0VDD5 57 aa1.12□□□□□ -2.23
LINC00888-204ENST00000487386 A0A0D9SG42 100 aa1.11□□□□□ -2.23
LINC00888-204ENST00000487386 H0YAA0 97 aa1.11□□□□□ -2.23
LINC00888-204ENST00000487386 LINC01554Q52M75 96 aa1.11□□□□□ -2.23
LINC00888-204ENST00000487386 SPATA8Q6RVD6 105 aa1.11□□□□□ -2.23
LINC00888-204ENST00000487386 CDC42SE1Q9NRR8 79 aa1.1□□□□□ -2.23
LINC00888-204ENST00000487386 FLGP20930 4061 aaPredicted RBP1.09□□□□□ -2.24
LINC00888-204ENST00000487386 MT2AP02795 61 aa1.08□□□□□ -2.24
LINC00888-204ENST00000487386 MT1FP04733 61 aa1.08□□□□□ -2.24
LINC00888-204ENST00000487386 MUC2Q02817 5179 aa1.07□□□□□ -2.24
LINC00888-204ENST00000487386 CRIPTQ9P021 101 aa1.07□□□□□ -2.24
LINC00888-204ENST00000487386 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
LINC00888-204ENST00000487386 AHNAKQ09666 5890 aaKnown RBP1.04□□□□□ -2.24
LINC00888-204ENST00000487386 PMAIP1Q13794 54 aa1.04□□□□□ -2.24
LINC00888-204ENST00000487386 MUC5BQ9HC84 5762 aaPredicted RBP1.04□□□□□ -2.24
LINC00888-204ENST00000487386 A6NN06 94 aa1.03□□□□□ -2.24
LINC00888-204ENST00000487386 KTN1-AS1Q86SY8 53 aa1.03□□□□□ -2.24
LINC00888-204ENST00000487386 PLAC4Q8WY50 150 aa1.03□□□□□ -2.24
LINC00888-204ENST00000487386 SPRR2GQ9BYE4 73 aa1.03□□□□□ -2.24
LINC00888-204ENST00000487386 MT1BP07438 61 aa1.01□□□□□ -2.25
LINC00888-204ENST00000487386 ROMO1P60602 79 aa1.01□□□□□ -2.25
LINC00888-204ENST00000487386 KRTAP19-8Q3LI54 63 aa1.01□□□□□ -2.25
LINC00888-204ENST00000487386 PRO2289Q9P1D8 64 aa1□□□□□ -2.25
LINC00888-204ENST00000487386 SSPOA2VEC9 5147 aa0.99□□□□□ -2.25
LINC00888-204ENST00000487386 TNP1P09430 55 aa0.98□□□□□ -2.25
LINC00888-204ENST00000487386 MT1XP80297 61 aa0.98□□□□□ -2.25
LINC00888-204ENST00000487386 C10orf95Q9H7T3 257 aa0.98□□□□□ -2.25
LINC00888-204ENST00000487386 GPR98Q8WXG9 6306 aa0.98□□□□□ -2.25
LINC00888-204ENST00000487386 USH2AO75445 5202 aa0.97□□□□□ -2.25
LINC00888-204ENST00000487386 KRTAP19-6Q3LI70 58 aa0.94□□□□□ -2.26
LINC00888-204ENST00000487386 KRTAP5-10Q6L8G5 202 aa0.94□□□□□ -2.26
LINC00888-204ENST00000487386 FSIP2Q5CZC0 6907 aa0.93□□□□□ -2.26
LINC00888-204ENST00000487386 KRTAP8-1Q8IUC2 63 aa0.91□□□□□ -2.26
LINC00888-204ENST00000487386 KRTAP19-5Q3LI72 72 aa0.89□□□□□ -2.27
LINC00888-204ENST00000487386 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
LINC00888-204ENST00000487386 MACF1Q9UPN3 7388 aaKnown RBP0.89□□□□□ -2.27
LINC00888-204ENST00000487386 SPRR2FQ96RM1 72 aa0.88□□□□□ -2.27
LINC00888-204ENST00000487386 MT1EP04732 61 aa0.87□□□□□ -2.27
LINC00888-204ENST00000487386 KRTAP19-7Q3SYF9 63 aa0.86□□□□□ -2.27
LINC00888-204ENST00000487386 KMT2DO14686 5537 aa0.86□□□□□ -2.27
LINC00888-204ENST00000487386 SPRR2EP22531 72 aa0.85□□□□□ -2.27
LINC00888-204ENST00000487386 SPRR2BP35325 72 aa0.85□□□□□ -2.27
LINC00888-204ENST00000487386 SPRR2AP35326 72 aa0.85□□□□□ -2.27
LINC00888-204ENST00000487386 MT1LQ93083 61 aa0.85□□□□□ -2.27
LINC00888-204ENST00000487386 SYNE2Q8WXH0 6885 aaKnown RBP0.84□□□□□ -2.27
LINC00888-204ENST00000487386 KRTAP19-3Q7Z4W3 81 aa0.84□□□□□ -2.27
LINC00888-204ENST00000487386 MUC12Q9UKN1 5478 aa0.83□□□□□ -2.28
LINC00888-204ENST00000487386 SPRR2DP22532 72 aa0.82□□□□□ -2.28
LINC00888-204ENST00000487386 MT1MQ8N339 61 aa0.82□□□□□ -2.28
LINC00888-204ENST00000487386 MT1GP13640 62 aa0.79□□□□□ -2.28
LINC00888-204ENST00000487386 MDN1Q9NU22 5596 aa0.79□□□□□ -2.28
LINC00888-204ENST00000487386 NEBP20929 6669 aa0.79□□□□□ -2.28
LINC00888-204ENST00000487386 KRTAP20-1Q3LI63 56 aa0.75□□□□□ -2.29
LINC00888-204ENST00000487386 MT1AP04731 61 aa0.73□□□□□ -2.29
LINC00888-204ENST00000487386 DSTQ03001 7570 aaKnown RBP0.72□□□□□ -2.29
LINC00888-204ENST00000487386 MT4P47944 62 aa0.71□□□□□ -2.3
LINC00888-204ENST00000487386 KRTAP6-1Q3LI64 71 aa0.71□□□□□ -2.3
LINC00888-204ENST00000487386 MUC5ACP98088 5654 aa0.71□□□□□ -2.3
LINC00888-204ENST00000487386 SYNE1Q8NF91 8797 aaKnown RBP0.7□□□□□ -2.3
LINC00888-204ENST00000487386 KRTAP2-3P0C7H8 128 aa0.7□□□□□ -2.3
LINC00888-204ENST00000487386 KRTAP2-4Q9BYR9 128 aa0.7□□□□□ -2.3
LINC00888-204ENST00000487386 KRTAP2-1Q9BYU5 128 aa0.69□□□□□ -2.3
LINC00888-204ENST00000487386 KRTAP20-2Q3LI61 65 aa0.66□□□□□ -2.3
LINC00888-204ENST00000487386 KRTAP6-2Q3LI66 62 aa0.65□□□□□ -2.31
LINC00888-204ENST00000487386 INE1O15225 51 aa0.63□□□□□ -2.31
LINC00888-204ENST00000487386 PRM1P04553 51 aa0.55□□□□□ -2.32
LINC00888-204ENST00000487386 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
LINC00888-204ENST00000487386 KRTAP21-1Q3LI58 79 aa0.4□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms