RNA–Protein interactions for RNA: ENST00000487137.6

CDH24-204, Transcript of cadherin 24, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDH24, Length 3,438 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-204ENST00000487137 KRTAP19-7Q3SYF9 63 aa6□□□□□ -1.45
CDH24-204ENST00000487137 KRTAP19-6Q3LI70 58 aa5.93□□□□□ -1.46
CDH24-204ENST00000487137 MACF1Q9UPN3 7388 aaKnown RBP5.92□□□□□ -1.46
CDH24-204ENST00000487137 SYNE2Q8WXH0 6885 aaKnown RBP5.88□□□□□ -1.47
CDH24-204ENST00000487137 MT1LQ93083 61 aa5.87□□□□□ -1.47
CDH24-204ENST00000487137 MT1EP04732 61 aa5.8□□□□□ -1.48
CDH24-204ENST00000487137 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
CDH24-204ENST00000487137 KRTAP4-3Q9BYR4 195 aa5.73□□□□□ -1.49
CDH24-204ENST00000487137 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.7□□□□□ -1.5
CDH24-204ENST00000487137 MT1GP13640 62 aa5.69□□□□□ -1.5
CDH24-204ENST00000487137 KRTAP12-4P60329 112 aa5.68□□□□□ -1.5
CDH24-204ENST00000487137 KRTAP19-4Q3LI73 84 aa5.63□□□□□ -1.51
CDH24-204ENST00000487137 DSTQ03001 7570 aaKnown RBP5.62□□□□□ -1.51
CDH24-204ENST00000487137 MUC12Q9UKN1 5478 aa5.6□□□□□ -1.51
CDH24-204ENST00000487137 SPRR2FQ96RM1 72 aa5.59□□□□□ -1.51
CDH24-204ENST00000487137 KRTAP9-7A8MTY7 169 aa5.56□□□□□ -1.52
CDH24-204ENST00000487137 MDN1Q9NU22 5596 aa5.47□□□□□ -1.53
CDH24-204ENST00000487137 SYNE1Q8NF91 8797 aaKnown RBP5.46□□□□□ -1.54
CDH24-204ENST00000487137 OBSCNQ5VST9 7968 aa5.45□□□□□ -1.54
CDH24-204ENST00000487137 MT1MQ8N339 61 aa5.42□□□□□ -1.54
CDH24-204ENST00000487137 LCE3BQ5TA77 95 aa5.41□□□□□ -1.54
CDH24-204ENST00000487137 KRTAP4-9Q9BYQ8 210 aa5.39□□□□□ -1.55
CDH24-204ENST00000487137 KRTAP19-3Q7Z4W3 81 aa5.36□□□□□ -1.55
CDH24-204ENST00000487137 SPRR2EP22531 72 aa5.34□□□□□ -1.55
CDH24-204ENST00000487137 SPRR2BP35325 72 aa5.34□□□□□ -1.55
CDH24-204ENST00000487137 SPRR2AP35326 72 aa5.34□□□□□ -1.55
CDH24-204ENST00000487137 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
CDH24-204ENST00000487137 KRTAP5-9P26371 169 aa5.19□□□□□ -1.58
CDH24-204ENST00000487137 LCE1AQ5T7P2 110 aa5.15□□□□□ -1.58
CDH24-204ENST00000487137 SPRR2DP22532 72 aa5.13□□□□□ -1.59
CDH24-204ENST00000487137 NEBP20929 6669 aa5.12□□□□□ -1.59
CDH24-204ENST00000487137 LCE3DQ9BYE3 92 aa5.1□□□□□ -1.59
CDH24-204ENST00000487137 PRM1P04553 51 aa5.07□□□□□ -1.6
CDH24-204ENST00000487137 LCE5AQ5TCM9 118 aa5.06□□□□□ -1.6
CDH24-204ENST00000487137 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
CDH24-204ENST00000487137 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
CDH24-204ENST00000487137 MT1AP04731 61 aa4.99□□□□□ -1.61
CDH24-204ENST00000487137 KRTAP5-5Q701N2 237 aaPredicted RBP4.93□□□□□ -1.62
CDH24-204ENST00000487137 KRTAP20-1Q3LI63 56 aa4.9□□□□□ -1.63
CDH24-204ENST00000487137 KRTAP6-2Q3LI66 62 aa4.76□□□□□ -1.65
CDH24-204ENST00000487137 KRTAP2-2Q9BYT5 123 aa4.68□□□□□ -1.66
CDH24-204ENST00000487137 MT4P47944 62 aa4.62□□□□□ -1.67
CDH24-204ENST00000487137 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
CDH24-204ENST00000487137 MT3P25713 68 aa4.41□□□□□ -1.7
CDH24-204ENST00000487137 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
CDH24-204ENST00000487137 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
CDH24-204ENST00000487137 KRTAP4-6Q9BYQ5 205 aa4.39□□□□□ -1.71
CDH24-204ENST00000487137 HMCN1Q96RW7 5635 aa4.36□□□□□ -1.71
CDH24-204ENST00000487137 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
CDH24-204ENST00000487137 MUC19Q7Z5P9 8384 aa4.3□□□□□ -1.72
CDH24-204ENST00000487137 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
CDH24-204ENST00000487137 KRTAP20-2Q3LI61 65 aa4.14□□□□□ -1.75
CDH24-204ENST00000487137 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
CDH24-204ENST00000487137 AHNAK2Q8IVF2 5795 aa3.91□□□□□ -1.78
CDH24-204ENST00000487137 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
CDH24-204ENST00000487137 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
CDH24-204ENST00000487137 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
CDH24-204ENST00000487137 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
CDH24-204ENST00000487137 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
CDH24-204ENST00000487137 KRTAP5-10Q6L8G5 202 aa3.65□□□□□ -1.83
CDH24-204ENST00000487137 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
CDH24-204ENST00000487137 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
CDH24-204ENST00000487137 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
CDH24-204ENST00000487137 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
CDH24-204ENST00000487137 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
CDH24-204ENST00000487137 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
CDH24-204ENST00000487137 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
CDH24-204ENST00000487137 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
CDH24-204ENST00000487137 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
CDH24-204ENST00000487137 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
CDH24-204ENST00000487137 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
CDH24-204ENST00000487137 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
CDH24-204ENST00000487137 KRTAP21-1Q3LI58 79 aa3.05□□□□□ -1.92
CDH24-204ENST00000487137 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
CDH24-204ENST00000487137 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
CDH24-204ENST00000487137 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
CDH24-204ENST00000487137 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 89.7 ms