RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 MT1LQ93083 61 aa7.98□□□□□ -1.13
CDHR3-212ENST00000487084 Q1T7F1 81 aa7.93□□□□□ -1.14
CDHR3-212ENST00000487084 MT1MQ8N339 61 aa7.92□□□□□ -1.14
CDHR3-212ENST00000487084 K7ERS5 55 aa7.91□□□□□ -1.14
CDHR3-212ENST00000487084 KRTAP12-3P60328 96 aa7.81□□□□□ -1.16
CDHR3-212ENST00000487084 KRTAP25-1Q3LHN0 102 aa7.79□□□□□ -1.16
CDHR3-212ENST00000487084 KRTAP4-3Q9BYR4 195 aa7.76□□□□□ -1.17
CDHR3-212ENST00000487084 KRTAP4-9Q9BYQ8 210 aa7.75□□□□□ -1.17
CDHR3-212ENST00000487084 A6NED7 52 aa7.74□□□□□ -1.17
CDHR3-212ENST00000487084 PCP4P48539 62 aa7.62□□□□□ -1.19
CDHR3-212ENST00000487084 KRTAP4-7Q9BYR0 210 aa7.62□□□□□ -1.19
CDHR3-212ENST00000487084 LCE4AQ5TA78 99 aa7.58□□□□□ -1.2
CDHR3-212ENST00000487084 RPS28P62857 69 aaKnown RBP7.57□□□□□ -1.2
CDHR3-212ENST00000487084 LCE1DQ5T752 114 aa7.57□□□□□ -1.2
CDHR3-212ENST00000487084 MT4P47944 62 aa7.54□□□□□ -1.2
CDHR3-212ENST00000487084 CDC42SE1Q9NRR8 79 aa7.49□□□□□ -1.21
CDHR3-212ENST00000487084 GPR98Q8WXG9 6306 aa7.45□□□□□ -1.22
CDHR3-212ENST00000487084 KRTAP23-1A1A580 65 aa7.45□□□□□ -1.22
CDHR3-212ENST00000487084 KRTAP5-4Q6L8H1 288 aa7.44□□□□□ -1.22
CDHR3-212ENST00000487084 HMCN1Q96RW7 5635 aa7.41□□□□□ -1.22
CDHR3-212ENST00000487084 ROMO1P60602 79 aa7.37□□□□□ -1.23
CDHR3-212ENST00000487084 KRTAP15-1Q3LI76 137 aa7.33□□□□□ -1.24
CDHR3-212ENST00000487084 KRTAP4-6Q9BYQ5 205 aa7.3□□□□□ -1.24
CDHR3-212ENST00000487084 KRTAP19-4Q3LI73 84 aa7.29□□□□□ -1.24
CDHR3-212ENST00000487084 LOC100996750A0A140TA64 210 aa7.22□□□□□ -1.25
CDHR3-212ENST00000487084 KRTAP5-5Q701N2 237 aaPredicted RBP7.21□□□□□ -1.26
CDHR3-212ENST00000487084 LCE3CQ5T5A8 94 aa7.19□□□□□ -1.26
CDHR3-212ENST00000487084 AHNAK2Q8IVF2 5795 aa7.12□□□□□ -1.27
CDHR3-212ENST00000487084 KRTAP12-4P60329 112 aa7.04□□□□□ -1.28
CDHR3-212ENST00000487084 KRTAP20-2Q3LI61 65 aa7.04□□□□□ -1.28
CDHR3-212ENST00000487084 SPRR5A0A1B0GTR4 108 aa7□□□□□ -1.29
CDHR3-212ENST00000487084 SYNE1Q8NF91 8797 aaKnown RBP6.97□□□□□ -1.29
CDHR3-212ENST00000487084 KRTAP5-10Q6L8G5 202 aa6.94□□□□□ -1.3
CDHR3-212ENST00000487084 KRTAP5-3Q6L8H2 238 aa6.82□□□□□ -1.32
CDHR3-212ENST00000487084 MT1AP04731 61 aa6.79□□□□□ -1.32
CDHR3-212ENST00000487084 KRTAP9-6A8MVA2 160 aa6.77□□□□□ -1.33
CDHR3-212ENST00000487084 BRK1Q8WUW1 75 aa6.76□□□□□ -1.33
CDHR3-212ENST00000487084 KRTAP6-1Q3LI64 71 aa6.75□□□□□ -1.33
CDHR3-212ENST00000487084 KRTAP5-7Q6L8G8 165 aa6.68□□□□□ -1.34
CDHR3-212ENST00000487084 KRTAP5-2Q701N4 177 aa6.54□□□□□ -1.36
CDHR3-212ENST00000487084 KRTAP9-4Q9BYQ2 154 aa6.54□□□□□ -1.36
CDHR3-212ENST00000487084 KRTAP6-2Q3LI66 62 aa6.43□□□□□ -1.38
CDHR3-212ENST00000487084 KRTAP4-11Q9BYQ6 195 aa6.4□□□□□ -1.38
CDHR3-212ENST00000487084 PMAIP1Q13794 54 aa6.33□□□□□ -1.4
CDHR3-212ENST00000487084 MT3P25713 68 aa6.21□□□□□ -1.42
CDHR3-212ENST00000487084 OBSCNQ5VST9 7968 aa6.18□□□□□ -1.42
CDHR3-212ENST00000487084 KRTAP5-8O75690 187 aa6.17□□□□□ -1.42
CDHR3-212ENST00000487084 PRAC1Q96KF2 57 aa6.11□□□□□ -1.43
CDHR3-212ENST00000487084 PRO0628Q9UI54 55 aa5.89□□□□□ -1.47
CDHR3-212ENST00000487084 KRTAP9-9Q9BYP9 154 aa5.86□□□□□ -1.47
CDHR3-212ENST00000487084 KRTAP5-1Q6L8H4 278 aa5.85□□□□□ -1.47
CDHR3-212ENST00000487084 MUC5BQ9HC84 5762 aaPredicted RBP5.83□□□□□ -1.48
CDHR3-212ENST00000487084 AHNAKQ09666 5890 aaKnown RBP5.82□□□□□ -1.48
CDHR3-212ENST00000487084 MUC5ACP98088 5654 aa5.79□□□□□ -1.48
CDHR3-212ENST00000487084 KTN1-AS1Q86SY8 53 aa5.64□□□□□ -1.51
CDHR3-212ENST00000487084 LCE1EQ5T753 118 aa5.63□□□□□ -1.51
CDHR3-212ENST00000487084 SVIPQ8NHG7 77 aa5.5□□□□□ -1.53
CDHR3-212ENST00000487084 LCE1BQ5T7P3 118 aa5.38□□□□□ -1.55
CDHR3-212ENST00000487084 KRTAP4-2Q9BYR5 136 aa5.33□□□□□ -1.56
CDHR3-212ENST00000487084 LCE1CQ5T751 118 aa5.23□□□□□ -1.57
CDHR3-212ENST00000487084 LCE3DQ9BYE3 92 aa5.21□□□□□ -1.58
CDHR3-212ENST00000487084 LUZP6Q538Z0 58 aa5.15□□□□□ -1.59
CDHR3-212ENST00000487084 LCE3EQ5T5B0 92 aa4.93□□□□□ -1.62
CDHR3-212ENST00000487084 KRTAP4-12Q9BQ66 201 aa4.84□□□□□ -1.63
CDHR3-212ENST00000487084 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.75□□□□□ -1.65
CDHR3-212ENST00000487084 KRTAP5-11Q6L8G4 156 aa4.73□□□□□ -1.65
CDHR3-212ENST00000487084 LCE1FQ5T754 118 aa4.55□□□□□ -1.68
CDHR3-212ENST00000487084 KRTAP21-2Q3LI59 83 aa4.42□□□□□ -1.7
CDHR3-212ENST00000487084 NDUFAF8A1L188 74 aa4.18□□□□□ -1.74
CDHR3-212ENST00000487084 PHGR1C9JFL3 82 aa4.12□□□□□ -1.75
CDHR3-212ENST00000487084 KRTAP4-4Q9BYR3 166 aa4.1□□□□□ -1.75
CDHR3-212ENST00000487084 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
CDHR3-212ENST00000487084 PRM1P04553 51 aa3.79□□□□□ -1.8
CDHR3-212ENST00000487084 INE1O15225 51 aa3.32□□□□□ -1.88
CDHR3-212ENST00000487084 A0A0A0MQY5 61 aa3.3□□□□□ -1.88
CDHR3-212ENST00000487084 KRTAP21-1Q3LI58 79 aa3.11□□□□□ -1.91
CDHR3-212ENST00000487084 MUC16Q8WXI7 14507 aa2.68□□□□□ -1.98
CDHR3-212ENST00000487084 H3BS24 57 aa2.48□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 61.3 ms