RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 FCGBPQ9Y6R7 5405 aaPredicted RBP5.83□□□□□ -1.48
FDPS-212ENST00000487002 INE1O15225 51 aa5.82□□□□□ -1.48
FDPS-212ENST00000487002 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
FDPS-212ENST00000487002 KRTAP2-3P0C7H8 128 aa5.68□□□□□ -1.5
FDPS-212ENST00000487002 KRTAP2-4Q9BYR9 128 aa5.68□□□□□ -1.5
FDPS-212ENST00000487002 KRTAP2-1Q9BYU5 128 aa5.68□□□□□ -1.5
FDPS-212ENST00000487002 KRTAP19-3Q7Z4W3 81 aa5.64□□□□□ -1.51
FDPS-212ENST00000487002 MT1GP13640 62 aa5.63□□□□□ -1.51
FDPS-212ENST00000487002 MT1MQ8N339 61 aa5.6□□□□□ -1.51
FDPS-212ENST00000487002 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
FDPS-212ENST00000487002 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
FDPS-212ENST00000487002 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.48□□□□□ -1.53
FDPS-212ENST00000487002 LCE5AQ5TCM9 118 aa5.48□□□□□ -1.53
FDPS-212ENST00000487002 SPRR2FQ96RM1 72 aa5.47□□□□□ -1.53
FDPS-212ENST00000487002 MUC12Q9UKN1 5478 aa5.47□□□□□ -1.53
FDPS-212ENST00000487002 KRTAP9-7A8MTY7 169 aa5.45□□□□□ -1.54
FDPS-212ENST00000487002 LOC100996750A0A140TA64 210 aa5.44□□□□□ -1.54
FDPS-212ENST00000487002 SYNE2Q8WXH0 6885 aaKnown RBP5.43□□□□□ -1.54
FDPS-212ENST00000487002 KRTAP5-9P26371 169 aa5.26□□□□□ -1.57
FDPS-212ENST00000487002 MDN1Q9NU22 5596 aa5.19□□□□□ -1.58
FDPS-212ENST00000487002 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
FDPS-212ENST00000487002 KRTAP6-3Q3LI67 103 aa5.09□□□□□ -1.59
FDPS-212ENST00000487002 SPRR2EP22531 72 aa5.05□□□□□ -1.6
FDPS-212ENST00000487002 SPRR2BP35325 72 aa5.05□□□□□ -1.6
FDPS-212ENST00000487002 SPRR2AP35326 72 aa5.05□□□□□ -1.6
FDPS-212ENST00000487002 KRTAP9-4Q9BYQ2 154 aa5.05□□□□□ -1.6
FDPS-212ENST00000487002 MT1AP04731 61 aa5.04□□□□□ -1.6
FDPS-212ENST00000487002 DSTQ03001 7570 aaKnown RBP5.03□□□□□ -1.6
FDPS-212ENST00000487002 KRTAP5-5Q701N2 237 aaPredicted RBP5.01□□□□□ -1.61
FDPS-212ENST00000487002 KRTAP6-1Q3LI64 71 aa4.99□□□□□ -1.61
FDPS-212ENST00000487002 LCE3BQ5TA77 95 aa4.99□□□□□ -1.61
FDPS-212ENST00000487002 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
FDPS-212ENST00000487002 NEBP20929 6669 aa4.96□□□□□ -1.62
FDPS-212ENST00000487002 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
FDPS-212ENST00000487002 KRTAP12-4P60329 112 aa4.9□□□□□ -1.63
FDPS-212ENST00000487002 SPRR2DP22532 72 aa4.85□□□□□ -1.63
FDPS-212ENST00000487002 KRTAP4-9Q9BYQ8 210 aa4.79□□□□□ -1.64
FDPS-212ENST00000487002 KRTAP20-1Q3LI63 56 aa4.78□□□□□ -1.64
FDPS-212ENST00000487002 LCE3DQ9BYE3 92 aa4.72□□□□□ -1.65
FDPS-212ENST00000487002 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
FDPS-212ENST00000487002 LCE3EQ5T5B0 92 aa4.65□□□□□ -1.66
FDPS-212ENST00000487002 KRTAP4-12Q9BQ66 201 aa4.55□□□□□ -1.68
FDPS-212ENST00000487002 MT3P25713 68 aa4.53□□□□□ -1.68
FDPS-212ENST00000487002 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
FDPS-212ENST00000487002 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
FDPS-212ENST00000487002 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.69
FDPS-212ENST00000487002 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
FDPS-212ENST00000487002 PRM1P04553 51 aa4.31□□□□□ -1.72
FDPS-212ENST00000487002 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
FDPS-212ENST00000487002 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
FDPS-212ENST00000487002 KRTAP5-2Q701N4 177 aa4.2□□□□□ -1.74
FDPS-212ENST00000487002 MT4P47944 62 aa4.19□□□□□ -1.74
FDPS-212ENST00000487002 HMCN1Q96RW7 5635 aa4.15□□□□□ -1.74
FDPS-212ENST00000487002 GPR98Q8WXG9 6306 aa4.11□□□□□ -1.75
FDPS-212ENST00000487002 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
FDPS-212ENST00000487002 OBSCNQ5VST9 7968 aa4.08□□□□□ -1.76
FDPS-212ENST00000487002 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
FDPS-212ENST00000487002 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
FDPS-212ENST00000487002 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
FDPS-212ENST00000487002 KRTAP4-11Q9BYQ6 195 aa3.74□□□□□ -1.81
FDPS-212ENST00000487002 KRTAP5-10Q6L8G5 202 aa3.73□□□□□ -1.81
FDPS-212ENST00000487002 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
FDPS-212ENST00000487002 KRTAP5-7Q6L8G8 165 aa3.62□□□□□ -1.83
FDPS-212ENST00000487002 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
FDPS-212ENST00000487002 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
FDPS-212ENST00000487002 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
FDPS-212ENST00000487002 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
FDPS-212ENST00000487002 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
FDPS-212ENST00000487002 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
FDPS-212ENST00000487002 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
FDPS-212ENST00000487002 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
FDPS-212ENST00000487002 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
FDPS-212ENST00000487002 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
FDPS-212ENST00000487002 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
FDPS-212ENST00000487002 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
FDPS-212ENST00000487002 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
FDPS-212ENST00000487002 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
FDPS-212ENST00000487002 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 626.7 ms