RNA–Protein interactions for RNA: ENST00000486993.1

SGPL1-204, Transcript of sphingosine-1-phosphate lyase 1, humanhuman

TSL 1 (best)

Gene SGPL1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPL1-204ENST00000486993 PSPHP1O15172 72 aa7.36□□□□□ -1.23
SGPL1-204ENST00000486993 MT1LQ93083 61 aa7.34□□□□□ -1.23
SGPL1-204ENST00000486993 MT1MQ8N339 61 aa7.3□□□□□ -1.24
SGPL1-204ENST00000486993 PCP4P48539 62 aa7.24□□□□□ -1.25
SGPL1-204ENST00000486993 KRTAP4-9Q9BYQ8 210 aa7.23□□□□□ -1.25
SGPL1-204ENST00000486993 K7ERS5 55 aa7.22□□□□□ -1.25
SGPL1-204ENST00000486993 RPS28P62857 69 aaKnown RBP7.18□□□□□ -1.26
SGPL1-204ENST00000486993 KRTAP12-3P60328 96 aa7.17□□□□□ -1.26
SGPL1-204ENST00000486993 KRTAP4-3Q9BYR4 195 aa7.16□□□□□ -1.26
SGPL1-204ENST00000486993 KRTAP25-1Q3LHN0 102 aa7.12□□□□□ -1.27
SGPL1-204ENST00000486993 A6NED7 52 aa7.1□□□□□ -1.27
SGPL1-204ENST00000486993 LCE1DQ5T752 114 aa7.03□□□□□ -1.28
SGPL1-204ENST00000486993 LCE4AQ5TA78 99 aa7.03□□□□□ -1.28
SGPL1-204ENST00000486993 KRTAP4-7Q9BYR0 210 aa7.02□□□□□ -1.29
SGPL1-204ENST00000486993 MT4P47944 62 aa7.01□□□□□ -1.29
SGPL1-204ENST00000486993 GPR98Q8WXG9 6306 aa6.9□□□□□ -1.3
SGPL1-204ENST00000486993 HMCN1Q96RW7 5635 aa6.89□□□□□ -1.31
SGPL1-204ENST00000486993 KRTAP23-1A1A580 65 aa6.88□□□□□ -1.31
SGPL1-204ENST00000486993 KRTAP5-4Q6L8H1 288 aa6.86□□□□□ -1.31
SGPL1-204ENST00000486993 CDC42SE1Q9NRR8 79 aa6.84□□□□□ -1.31
SGPL1-204ENST00000486993 KRTAP4-6Q9BYQ5 205 aa6.78□□□□□ -1.32
SGPL1-204ENST00000486993 ROMO1P60602 79 aa6.77□□□□□ -1.33
SGPL1-204ENST00000486993 KRTAP15-1Q3LI76 137 aa6.72□□□□□ -1.33
SGPL1-204ENST00000486993 KRTAP19-4Q3LI73 84 aa6.68□□□□□ -1.34
SGPL1-204ENST00000486993 LOC100996750A0A140TA64 210 aa6.66□□□□□ -1.34
SGPL1-204ENST00000486993 KRTAP5-5Q701N2 237 aaPredicted RBP6.63□□□□□ -1.35
SGPL1-204ENST00000486993 AHNAK2Q8IVF2 5795 aa6.62□□□□□ -1.35
SGPL1-204ENST00000486993 LCE3CQ5T5A8 94 aa6.6□□□□□ -1.35
SGPL1-204ENST00000486993 KRTAP12-4P60329 112 aa6.52□□□□□ -1.37
SGPL1-204ENST00000486993 KRTAP20-2Q3LI61 65 aa6.52□□□□□ -1.37
SGPL1-204ENST00000486993 SYNE1Q8NF91 8797 aaKnown RBP6.46□□□□□ -1.37
SGPL1-204ENST00000486993 SPRR5A0A1B0GTR4 108 aa6.46□□□□□ -1.38
SGPL1-204ENST00000486993 KRTAP5-10Q6L8G5 202 aa6.45□□□□□ -1.38
SGPL1-204ENST00000486993 KRTAP5-3Q6L8H2 238 aa6.34□□□□□ -1.39
SGPL1-204ENST00000486993 BRK1Q8WUW1 75 aa6.28□□□□□ -1.4
SGPL1-204ENST00000486993 MT1AP04731 61 aa6.24□□□□□ -1.41
SGPL1-204ENST00000486993 KRTAP9-6A8MVA2 160 aa6.22□□□□□ -1.41
SGPL1-204ENST00000486993 KRTAP6-1Q3LI64 71 aa6.22□□□□□ -1.41
SGPL1-204ENST00000486993 KRTAP5-7Q6L8G8 165 aa6.18□□□□□ -1.42
SGPL1-204ENST00000486993 KRTAP9-4Q9BYQ2 154 aa6.03□□□□□ -1.44
SGPL1-204ENST00000486993 KRTAP5-2Q701N4 177 aa6.02□□□□□ -1.45
SGPL1-204ENST00000486993 KRTAP6-2Q3LI66 62 aa5.95□□□□□ -1.46
SGPL1-204ENST00000486993 KRTAP4-11Q9BYQ6 195 aa5.93□□□□□ -1.46
SGPL1-204ENST00000486993 PMAIP1Q13794 54 aa5.91□□□□□ -1.46
SGPL1-204ENST00000486993 KRTAP5-8O75690 187 aa5.72□□□□□ -1.49
SGPL1-204ENST00000486993 MT3P25713 68 aa5.72□□□□□ -1.49
SGPL1-204ENST00000486993 PRAC1Q96KF2 57 aa5.69□□□□□ -1.5
SGPL1-204ENST00000486993 OBSCNQ5VST9 7968 aa5.63□□□□□ -1.51
SGPL1-204ENST00000486993 PRO0628Q9UI54 55 aa5.62□□□□□ -1.51
SGPL1-204ENST00000486993 KRTAP9-9Q9BYP9 154 aa5.45□□□□□ -1.54
SGPL1-204ENST00000486993 AHNAKQ09666 5890 aaKnown RBP5.43□□□□□ -1.54
SGPL1-204ENST00000486993 MUC5BQ9HC84 5762 aaPredicted RBP5.4□□□□□ -1.54
SGPL1-204ENST00000486993 MUC5ACP98088 5654 aa5.4□□□□□ -1.55
SGPL1-204ENST00000486993 KRTAP5-1Q6L8H4 278 aa5.39□□□□□ -1.55
SGPL1-204ENST00000486993 KTN1-AS1Q86SY8 53 aa5.35□□□□□ -1.55
SGPL1-204ENST00000486993 LCE1EQ5T753 118 aa5.18□□□□□ -1.58
SGPL1-204ENST00000486993 SVIPQ8NHG7 77 aa5.04□□□□□ -1.6
SGPL1-204ENST00000486993 LCE1BQ5T7P3 118 aa4.99□□□□□ -1.61
SGPL1-204ENST00000486993 KRTAP4-2Q9BYR5 136 aa4.9□□□□□ -1.63
SGPL1-204ENST00000486993 LCE1CQ5T751 118 aa4.82□□□□□ -1.64
SGPL1-204ENST00000486993 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
SGPL1-204ENST00000486993 LUZP6Q538Z0 58 aa4.71□□□□□ -1.66
SGPL1-204ENST00000486993 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
SGPL1-204ENST00000486993 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
SGPL1-204ENST00000486993 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
SGPL1-204ENST00000486993 KRTAP5-11Q6L8G4 156 aa4.35□□□□□ -1.71
SGPL1-204ENST00000486993 H3BS24 57 aa4.22□□□□□ -1.73
SGPL1-204ENST00000486993 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
SGPL1-204ENST00000486993 KRTAP21-2Q3LI59 83 aa4.07□□□□□ -1.76
SGPL1-204ENST00000486993 NDUFAF8A1L188 74 aa3.95□□□□□ -1.78
SGPL1-204ENST00000486993 PHGR1C9JFL3 82 aa3.81□□□□□ -1.8
SGPL1-204ENST00000486993 KRTAP4-4Q9BYR3 166 aa3.8□□□□□ -1.8
SGPL1-204ENST00000486993 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
SGPL1-204ENST00000486993 MUC19Q7Z5P9 8384 aa3.51□□□□□ -1.85
SGPL1-204ENST00000486993 PRM1P04553 51 aa3.47□□□□□ -1.85
SGPL1-204ENST00000486993 INE1O15225 51 aa3.18□□□□□ -1.9
SGPL1-204ENST00000486993 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
SGPL1-204ENST00000486993 MUC16Q8WXI7 14507 aa2.46□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 7.5 ms