RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 NDUFAF8A1L188 74 aa4.05□□□□□ -1.76
PRKCB-207ENST00000486868 MT1GP13640 62 aa4.04□□□□□ -1.76
PRKCB-207ENST00000486868 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
PRKCB-207ENST00000486868 KRTAP19-3Q7Z4W3 81 aa4.04□□□□□ -1.76
PRKCB-207ENST00000486868 SPRR2FQ96RM1 72 aa4.02□□□□□ -1.77
PRKCB-207ENST00000486868 MACF1Q9UPN3 7388 aaKnown RBP4.01□□□□□ -1.77
PRKCB-207ENST00000486868 LCE5AQ5TCM9 118 aa3.97□□□□□ -1.77
PRKCB-207ENST00000486868 MT1MQ8N339 61 aa3.95□□□□□ -1.78
PRKCB-207ENST00000486868 KRTAP6-3Q3LI67 103 aa3.93□□□□□ -1.78
PRKCB-207ENST00000486868 KRTAP4-7Q9BYR0 210 aa3.92□□□□□ -1.78
PRKCB-207ENST00000486868 NEBP20929 6669 aa3.89□□□□□ -1.79
PRKCB-207ENST00000486868 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
PRKCB-207ENST00000486868 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
PRKCB-207ENST00000486868 MUC12Q9UKN1 5478 aa3.85□□□□□ -1.79
PRKCB-207ENST00000486868 SPRR2EP22531 72 aa3.79□□□□□ -1.8
PRKCB-207ENST00000486868 SPRR2BP35325 72 aa3.79□□□□□ -1.8
PRKCB-207ENST00000486868 SPRR2AP35326 72 aa3.79□□□□□ -1.8
PRKCB-207ENST00000486868 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
PRKCB-207ENST00000486868 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
PRKCB-207ENST00000486868 KRTAP2-3P0C7H8 128 aa3.7□□□□□ -1.82
PRKCB-207ENST00000486868 KRTAP2-4Q9BYR9 128 aa3.7□□□□□ -1.82
PRKCB-207ENST00000486868 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
PRKCB-207ENST00000486868 MDN1Q9NU22 5596 aa3.69□□□□□ -1.82
PRKCB-207ENST00000486868 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
PRKCB-207ENST00000486868 LOC100996750A0A140TA64 210 aa3.67□□□□□ -1.82
PRKCB-207ENST00000486868 H3BS24 57 aa3.67□□□□□ -1.82
PRKCB-207ENST00000486868 SPRR2DP22532 72 aa3.66□□□□□ -1.82
PRKCB-207ENST00000486868 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
PRKCB-207ENST00000486868 MT1AP04731 61 aa3.55□□□□□ -1.84
PRKCB-207ENST00000486868 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
PRKCB-207ENST00000486868 LCE3BQ5TA77 95 aa3.51□□□□□ -1.85
PRKCB-207ENST00000486868 INE1O15225 51 aa3.47□□□□□ -1.85
PRKCB-207ENST00000486868 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
PRKCB-207ENST00000486868 DSTQ03001 7570 aaKnown RBP3.43□□□□□ -1.86
PRKCB-207ENST00000486868 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
PRKCB-207ENST00000486868 KRTAP2-2Q9BYT5 123 aa3.38□□□□□ -1.87
PRKCB-207ENST00000486868 KRTAP9-4Q9BYQ2 154 aa3.36□□□□□ -1.87
PRKCB-207ENST00000486868 LCE4AQ5TA78 99 aa3.34□□□□□ -1.87
PRKCB-207ENST00000486868 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
PRKCB-207ENST00000486868 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
PRKCB-207ENST00000486868 KRTAP4-6Q9BYQ5 205 aa3.28□□□□□ -1.88
PRKCB-207ENST00000486868 MT3P25713 68 aa3.22□□□□□ -1.89
PRKCB-207ENST00000486868 KRTAP4-9Q9BYQ8 210 aa3.16□□□□□ -1.9
PRKCB-207ENST00000486868 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
PRKCB-207ENST00000486868 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
PRKCB-207ENST00000486868 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
PRKCB-207ENST00000486868 MT4P47944 62 aa3.12□□□□□ -1.91
PRKCB-207ENST00000486868 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
PRKCB-207ENST00000486868 LCE1DQ5T752 114 aa3.1□□□□□ -1.91
PRKCB-207ENST00000486868 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
PRKCB-207ENST00000486868 KRTAP5-3Q6L8H2 238 aa3.04□□□□□ -1.92
PRKCB-207ENST00000486868 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
PRKCB-207ENST00000486868 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
PRKCB-207ENST00000486868 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
PRKCB-207ENST00000486868 KRTAP4-12Q9BQ66 201 aa2.91□□□□□ -1.94
PRKCB-207ENST00000486868 KRTAP5-7Q6L8G8 165 aa2.88□□□□□ -1.95
PRKCB-207ENST00000486868 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
PRKCB-207ENST00000486868 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
PRKCB-207ENST00000486868 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
PRKCB-207ENST00000486868 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
PRKCB-207ENST00000486868 PRM1P04553 51 aa2.65□□□□□ -1.99
PRKCB-207ENST00000486868 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
PRKCB-207ENST00000486868 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
PRKCB-207ENST00000486868 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
PRKCB-207ENST00000486868 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
PRKCB-207ENST00000486868 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
PRKCB-207ENST00000486868 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
PRKCB-207ENST00000486868 KRTAP4-2Q9BYR5 136 aa2.56□□□□□ -2
PRKCB-207ENST00000486868 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
PRKCB-207ENST00000486868 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
PRKCB-207ENST00000486868 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
PRKCB-207ENST00000486868 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
PRKCB-207ENST00000486868 LCE1FQ5T754 118 aa2.1□□□□□ -2.07
PRKCB-207ENST00000486868 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
PRKCB-207ENST00000486868 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
PRKCB-207ENST00000486868 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
PRKCB-207ENST00000486868 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
PRKCB-207ENST00000486868 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 121.6 ms