RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 PKHD1P08F94 4074 aa1.74□□□□□ -2.13
COPS3-209ENST00000486810 LPAP08519 4548 aa1.74□□□□□ -2.13
COPS3-209ENST00000486810 LRP1BQ9NZR2 4599 aa1.71□□□□□ -2.14
COPS3-209ENST00000486810 CRCT1Q9UGL9 99 aa1.67□□□□□ -2.14
COPS3-209ENST00000486810 MUC17Q685J3 4493 aa1.67□□□□□ -2.14
COPS3-209ENST00000486810 FAT1Q14517 4588 aa1.65□□□□□ -2.14
COPS3-209ENST00000486810 J3QKU1 62 aa1.65□□□□□ -2.15
COPS3-209ENST00000486810 KRTAP19-5Q3LI72 72 aa1.65□□□□□ -2.15
COPS3-209ENST00000486810 SPRR2GQ9BYE4 73 aa1.61□□□□□ -2.15
COPS3-209ENST00000486810 HERC1Q15751 4861 aa1.6□□□□□ -2.15
COPS3-209ENST00000486810 KRTAP4-1Q9BYQ7 146 aa1.6□□□□□ -2.15
COPS3-209ENST00000486810 PRM1P04553 51 aa1.59□□□□□ -2.15
COPS3-209ENST00000486810 KRTAP21-3Q3LHN1 58 aa1.56□□□□□ -2.16
COPS3-209ENST00000486810 MT1AP04731 61 aa1.55□□□□□ -2.16
COPS3-209ENST00000486810 KRTAP19-2Q3LHN2 52 aa1.52□□□□□ -2.17
COPS3-209ENST00000486810 SYNE1Q8NF91 8797 aaKnown RBP1.47□□□□□ -2.17
COPS3-209ENST00000486810 KRTAP19-8Q3LI54 63 aa1.47□□□□□ -2.17
COPS3-209ENST00000486810 FCGBPQ9Y6R7 5405 aaPredicted RBP1.46□□□□□ -2.18
COPS3-209ENST00000486810 MT1EP04732 61 aa1.45□□□□□ -2.18
COPS3-209ENST00000486810 MT1XP80297 61 aa1.45□□□□□ -2.18
COPS3-209ENST00000486810 LRP2P98164 4655 aa1.44□□□□□ -2.18
COPS3-209ENST00000486810 MT1LQ93083 61 aa1.41□□□□□ -2.18
COPS3-209ENST00000486810 KRTAP6-2Q3LI66 62 aa1.36□□□□□ -2.19
COPS3-209ENST00000486810 MUC2Q02817 5179 aa1.34□□□□□ -2.19
COPS3-209ENST00000486810 SPRR2FQ96RM1 72 aa1.34□□□□□ -2.19
COPS3-209ENST00000486810 GPR98Q8WXG9 6306 aa1.34□□□□□ -2.2
COPS3-209ENST00000486810 HMCN2Q8NDA2 5059 aa1.33□□□□□ -2.2
COPS3-209ENST00000486810 MT1HL1P0DM35 61 aa1.33□□□□□ -2.2
COPS3-209ENST00000486810 SPRR2BP35325 72 aa1.33□□□□□ -2.2
COPS3-209ENST00000486810 SPRR2AP35326 72 aa1.33□□□□□ -2.2
COPS3-209ENST00000486810 DNHD1Q96M86 4753 aa1.32□□□□□ -2.2
COPS3-209ENST00000486810 MT1BP07438 61 aa1.32□□□□□ -2.2
COPS3-209ENST00000486810 SPRR2DP22532 72 aa1.31□□□□□ -2.2
COPS3-209ENST00000486810 KRTAP19-7Q3SYF9 63 aa1.28□□□□□ -2.2
COPS3-209ENST00000486810 MT1HP80294 61 aa1.27□□□□□ -2.21
COPS3-209ENST00000486810 HYDINQ4G0P3 5121 aa1.26□□□□□ -2.21
COPS3-209ENST00000486810 SPRR2EP22531 72 aa1.25□□□□□ -2.21
COPS3-209ENST00000486810 KRTAP19-3Q7Z4W3 81 aa1.25□□□□□ -2.21
COPS3-209ENST00000486810 KMT2CQ8NEZ4 4911 aaKnown RBP1.2□□□□□ -2.22
COPS3-209ENST00000486810 MT2AP02795 61 aa1.18□□□□□ -2.22
COPS3-209ENST00000486810 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
COPS3-209ENST00000486810 MT1FP04733 61 aa1.17□□□□□ -2.22
COPS3-209ENST00000486810 MT1GP13640 62 aa1.17□□□□□ -2.22
COPS3-209ENST00000486810 RYR3Q15413 4870 aa1.15□□□□□ -2.23
COPS3-209ENST00000486810 HERC2O95714 4834 aa1.14□□□□□ -2.23
COPS3-209ENST00000486810 RYR1P21817 5038 aa1.14□□□□□ -2.23
COPS3-209ENST00000486810 MUC5BQ9HC84 5762 aaPredicted RBP1.14□□□□□ -2.23
COPS3-209ENST00000486810 PCLOQ9Y6V0 5065 aa1.14□□□□□ -2.23
COPS3-209ENST00000486810 BIRC6Q9NR09 4857 aa1.12□□□□□ -2.23
COPS3-209ENST00000486810 UBR4Q5T4S7 5183 aa1.11□□□□□ -2.23
COPS3-209ENST00000486810 MT1MQ8N339 61 aa1.1□□□□□ -2.23
COPS3-209ENST00000486810 USH2AO75445 5202 aa1.09□□□□□ -2.24
COPS3-209ENST00000486810 KRTAP6-1Q3LI64 71 aa1.07□□□□□ -2.24
COPS3-209ENST00000486810 RYR2Q92736 4967 aa1.05□□□□□ -2.24
COPS3-209ENST00000486810 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
COPS3-209ENST00000486810 RNF213Q63HN8 5207 aa1.02□□□□□ -2.25
COPS3-209ENST00000486810 AHNAKQ09666 5890 aaKnown RBP1.02□□□□□ -2.25
COPS3-209ENST00000486810 FAT4Q6V0I7 4981 aa1.01□□□□□ -2.25
COPS3-209ENST00000486810 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
COPS3-209ENST00000486810 SSPOA2VEC9 5147 aa0.98□□□□□ -2.25
COPS3-209ENST00000486810 MDN1Q9NU22 5596 aa0.96□□□□□ -2.26
COPS3-209ENST00000486810 MACF1Q9UPN3 7388 aaKnown RBP0.94□□□□□ -2.26
COPS3-209ENST00000486810 ABCA13Q86UQ4 5058 aa0.93□□□□□ -2.26
COPS3-209ENST00000486810 EPPK1P58107 5090 aaKnown RBP0.92□□□□□ -2.26
COPS3-209ENST00000486810 KMT2DO14686 5537 aa0.87□□□□□ -2.27
COPS3-209ENST00000486810 MUC5ACP98088 5654 aa0.86□□□□□ -2.27
COPS3-209ENST00000486810 KIAA1109Q2LD37 5005 aa0.84□□□□□ -2.27
COPS3-209ENST00000486810 AHNAK2Q8IVF2 5795 aa0.83□□□□□ -2.28
COPS3-209ENST00000486810 SYNE2Q8WXH0 6885 aaKnown RBP0.75□□□□□ -2.29
COPS3-209ENST00000486810 FSIP2Q5CZC0 6907 aa0.72□□□□□ -2.29
COPS3-209ENST00000486810 KRTAP19-6Q3LI70 58 aa0.69□□□□□ -2.3
COPS3-209ENST00000486810 DSTQ03001 7570 aaKnown RBP0.66□□□□□ -2.3
COPS3-209ENST00000486810 MUC12Q9UKN1 5478 aa0.63□□□□□ -2.31
COPS3-209ENST00000486810 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
COPS3-209ENST00000486810 KRTAP20-2Q3LI61 65 aa0.45□□□□□ -2.34
COPS3-209ENST00000486810 MT4P47944 62 aa0.41□□□□□ -2.34
COPS3-209ENST00000486810 NEBP20929 6669 aa0.4□□□□□ -2.34
COPS3-209ENST00000486810 KRTAP20-1Q3LI63 56 aa0.31□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 131.9 ms