RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 KRTAP4-7Q9BYR0 210 aa4.53□□□□□ -1.68
SHROOM3-208ENST00000486758 LCE3CQ5T5A8 94 aa4.52□□□□□ -1.69
SHROOM3-208ENST00000486758 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
SHROOM3-208ENST00000486758 MACF1Q9UPN3 7388 aaKnown RBP4.47□□□□□ -1.69
SHROOM3-208ENST00000486758 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
SHROOM3-208ENST00000486758 SPRR2FQ96RM1 72 aa4.42□□□□□ -1.7
SHROOM3-208ENST00000486758 MUC12Q9UKN1 5478 aa4.4□□□□□ -1.7
SHROOM3-208ENST00000486758 KRTAP19-6Q3LI70 58 aa4.38□□□□□ -1.71
SHROOM3-208ENST00000486758 KRTAP20-1Q3LI63 56 aa4.37□□□□□ -1.71
SHROOM3-208ENST00000486758 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
SHROOM3-208ENST00000486758 SPRR2EP22531 72 aa4.33□□□□□ -1.72
SHROOM3-208ENST00000486758 SPRR2BP35325 72 aa4.33□□□□□ -1.72
SHROOM3-208ENST00000486758 SPRR2AP35326 72 aa4.33□□□□□ -1.72
SHROOM3-208ENST00000486758 NEBP20929 6669 aa4.22□□□□□ -1.73
SHROOM3-208ENST00000486758 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
SHROOM3-208ENST00000486758 LOC100996750A0A140TA64 210 aa4.2□□□□□ -1.74
SHROOM3-208ENST00000486758 MT1GP13640 62 aa4.18□□□□□ -1.74
SHROOM3-208ENST00000486758 SPRR2DP22532 72 aa4.17□□□□□ -1.74
SHROOM3-208ENST00000486758 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
SHROOM3-208ENST00000486758 MT1LQ93083 61 aa4.12□□□□□ -1.75
SHROOM3-208ENST00000486758 KRTAP12-4P60329 112 aa4.12□□□□□ -1.75
SHROOM3-208ENST00000486758 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
SHROOM3-208ENST00000486758 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
SHROOM3-208ENST00000486758 MT1EP04732 61 aa4.11□□□□□ -1.75
SHROOM3-208ENST00000486758 MDN1Q9NU22 5596 aa4.06□□□□□ -1.76
SHROOM3-208ENST00000486758 KRTAP2-1Q9BYU5 128 aa4.04□□□□□ -1.76
SHROOM3-208ENST00000486758 LCE3BQ5TA77 95 aa4.01□□□□□ -1.77
SHROOM3-208ENST00000486758 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
SHROOM3-208ENST00000486758 KRTAP4-9Q9BYQ8 210 aa3.93□□□□□ -1.78
SHROOM3-208ENST00000486758 KRTAP19-3Q7Z4W3 81 aa3.91□□□□□ -1.78
SHROOM3-208ENST00000486758 GPR98Q8WXG9 6306 aa3.9□□□□□ -1.79
SHROOM3-208ENST00000486758 MT1MQ8N339 61 aa3.89□□□□□ -1.79
SHROOM3-208ENST00000486758 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.8
SHROOM3-208ENST00000486758 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
SHROOM3-208ENST00000486758 MT4P47944 62 aa3.78□□□□□ -1.8
SHROOM3-208ENST00000486758 KRTAP19-4Q3LI73 84 aa3.74□□□□□ -1.81
SHROOM3-208ENST00000486758 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
SHROOM3-208ENST00000486758 PRM1P04553 51 aa3.67□□□□□ -1.82
SHROOM3-208ENST00000486758 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
SHROOM3-208ENST00000486758 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
SHROOM3-208ENST00000486758 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.84
SHROOM3-208ENST00000486758 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
SHROOM3-208ENST00000486758 LCE1DQ5T752 114 aa3.48□□□□□ -1.85
SHROOM3-208ENST00000486758 MT1AP04731 61 aa3.43□□□□□ -1.86
SHROOM3-208ENST00000486758 MUC19Q7Z5P9 8384 aa3.43□□□□□ -1.86
SHROOM3-208ENST00000486758 LCE4AQ5TA78 99 aa3.41□□□□□ -1.86
SHROOM3-208ENST00000486758 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
SHROOM3-208ENST00000486758 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
SHROOM3-208ENST00000486758 KRTAP4-6Q9BYQ5 205 aa3.3□□□□□ -1.88
SHROOM3-208ENST00000486758 MT3P25713 68 aa3.25□□□□□ -1.89
SHROOM3-208ENST00000486758 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
SHROOM3-208ENST00000486758 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
SHROOM3-208ENST00000486758 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
SHROOM3-208ENST00000486758 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.9
SHROOM3-208ENST00000486758 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
SHROOM3-208ENST00000486758 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
SHROOM3-208ENST00000486758 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
SHROOM3-208ENST00000486758 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
SHROOM3-208ENST00000486758 KRTAP5-10Q6L8G5 202 aa2.99□□□□□ -1.93
SHROOM3-208ENST00000486758 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
SHROOM3-208ENST00000486758 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
SHROOM3-208ENST00000486758 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
SHROOM3-208ENST00000486758 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
SHROOM3-208ENST00000486758 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
SHROOM3-208ENST00000486758 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
SHROOM3-208ENST00000486758 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
SHROOM3-208ENST00000486758 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
SHROOM3-208ENST00000486758 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -2
SHROOM3-208ENST00000486758 KRTAP4-12Q9BQ66 201 aa2.48□□□□□ -2.01
SHROOM3-208ENST00000486758 KRTAP4-2Q9BYR5 136 aa2.48□□□□□ -2.01
SHROOM3-208ENST00000486758 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
SHROOM3-208ENST00000486758 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
SHROOM3-208ENST00000486758 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
SHROOM3-208ENST00000486758 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
SHROOM3-208ENST00000486758 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
SHROOM3-208ENST00000486758 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.97□□□□□ -2.09
SHROOM3-208ENST00000486758 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
SHROOM3-208ENST00000486758 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 63.4 ms