RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 MT1LQ93083 61 aa7.82□□□□□ -1.16
HLA-F-228ENST00000486194 MT1MQ8N339 61 aa7.79□□□□□ -1.16
HLA-F-228ENST00000486194 KRTAP4-9Q9BYQ8 210 aa7.78□□□□□ -1.16
HLA-F-228ENST00000486194 PSPHP1O15172 72 aa7.77□□□□□ -1.17
HLA-F-228ENST00000486194 UQCR11O14957 56 aa7.7□□□□□ -1.18
HLA-F-228ENST00000486194 LCE4AQ5TA78 99 aa7.66□□□□□ -1.18
HLA-F-228ENST00000486194 LCE1DQ5T752 114 aa7.63□□□□□ -1.19
HLA-F-228ENST00000486194 A6NED7 52 aa7.55□□□□□ -1.2
HLA-F-228ENST00000486194 KRTAP12-3P60328 96 aa7.55□□□□□ -1.2
HLA-F-228ENST00000486194 MIR22HGQ0VDD5 57 aa7.55□□□□□ -1.2
HLA-F-228ENST00000486194 KRTAP4-3Q9BYR4 195 aa7.55□□□□□ -1.2
HLA-F-228ENST00000486194 GPR98Q8WXG9 6306 aa7.53□□□□□ -1.2
HLA-F-228ENST00000486194 MT4P47944 62 aa7.53□□□□□ -1.2
HLA-F-228ENST00000486194 KRTAP5-4Q6L8H1 288 aa7.47□□□□□ -1.21
HLA-F-228ENST00000486194 K7ERS5 55 aa7.45□□□□□ -1.22
HLA-F-228ENST00000486194 KRTAP25-1Q3LHN0 102 aa7.45□□□□□ -1.22
HLA-F-228ENST00000486194 CDC42SE1Q9NRR8 79 aa7.41□□□□□ -1.22
HLA-F-228ENST00000486194 HMCN1Q96RW7 5635 aa7.38□□□□□ -1.23
HLA-F-228ENST00000486194 KRTAP4-7Q9BYR0 210 aa7.37□□□□□ -1.23
HLA-F-228ENST00000486194 KRTAP4-6Q9BYQ5 205 aa7.29□□□□□ -1.24
HLA-F-228ENST00000486194 BRK1Q8WUW1 75 aa7.25□□□□□ -1.25
HLA-F-228ENST00000486194 KRTAP19-4Q3LI73 84 aa7.22□□□□□ -1.25
HLA-F-228ENST00000486194 KRTAP23-1A1A580 65 aa7.18□□□□□ -1.26
HLA-F-228ENST00000486194 KRTAP5-5Q701N2 237 aaPredicted RBP7.14□□□□□ -1.27
HLA-F-228ENST00000486194 AHNAK2Q8IVF2 5795 aa7.12□□□□□ -1.27
HLA-F-228ENST00000486194 KRTAP5-10Q6L8G5 202 aa7.11□□□□□ -1.27
HLA-F-228ENST00000486194 SPRR5A0A1B0GTR4 108 aa7.05□□□□□ -1.28
HLA-F-228ENST00000486194 KRTAP12-4P60329 112 aa7.05□□□□□ -1.28
HLA-F-228ENST00000486194 KRTAP20-2Q3LI61 65 aa7.05□□□□□ -1.28
HLA-F-228ENST00000486194 KRTAP15-1Q3LI76 137 aa7.05□□□□□ -1.28
HLA-F-228ENST00000486194 LOC100996750A0A140TA64 210 aa6.99□□□□□ -1.29
HLA-F-228ENST00000486194 PRO0628Q9UI54 55 aa6.98□□□□□ -1.29
HLA-F-228ENST00000486194 LCE3CQ5T5A8 94 aa6.95□□□□□ -1.3
HLA-F-228ENST00000486194 KRTAP5-3Q6L8H2 238 aa6.95□□□□□ -1.3
HLA-F-228ENST00000486194 ROMO1P60602 79 aa6.92□□□□□ -1.3
HLA-F-228ENST00000486194 PMAIP1Q13794 54 aa6.86□□□□□ -1.31
HLA-F-228ENST00000486194 KRTAP5-7Q6L8G8 165 aa6.86□□□□□ -1.31
HLA-F-228ENST00000486194 SYNE1Q8NF91 8797 aaKnown RBP6.77□□□□□ -1.33
HLA-F-228ENST00000486194 MT1AP04731 61 aa6.67□□□□□ -1.34
HLA-F-228ENST00000486194 KRTAP6-1Q3LI64 71 aa6.59□□□□□ -1.35
HLA-F-228ENST00000486194 KRTAP5-2Q701N4 177 aa6.53□□□□□ -1.36
HLA-F-228ENST00000486194 KTN1-AS1Q86SY8 53 aa6.5□□□□□ -1.37
HLA-F-228ENST00000486194 KRTAP9-6A8MVA2 160 aa6.48□□□□□ -1.37
HLA-F-228ENST00000486194 KRTAP4-11Q9BYQ6 195 aa6.46□□□□□ -1.38
HLA-F-228ENST00000486194 KRTAP9-4Q9BYQ2 154 aa6.44□□□□□ -1.38
HLA-F-228ENST00000486194 PRAC1Q96KF2 57 aa6.41□□□□□ -1.38
HLA-F-228ENST00000486194 KRTAP6-2Q3LI66 62 aa6.32□□□□□ -1.4
HLA-F-228ENST00000486194 KRTAP5-8O75690 187 aa6.22□□□□□ -1.41
HLA-F-228ENST00000486194 MT3P25713 68 aa6.13□□□□□ -1.43
HLA-F-228ENST00000486194 SVIPQ8NHG7 77 aa6.09□□□□□ -1.43
HLA-F-228ENST00000486194 OBSCNQ5VST9 7968 aa6.03□□□□□ -1.44
HLA-F-228ENST00000486194 KRTAP9-9Q9BYP9 154 aa5.96□□□□□ -1.46
HLA-F-228ENST00000486194 MUC5ACP98088 5654 aa5.92□□□□□ -1.46
HLA-F-228ENST00000486194 KRTAP5-1Q6L8H4 278 aa5.86□□□□□ -1.47
HLA-F-228ENST00000486194 AHNAKQ09666 5890 aaKnown RBP5.85□□□□□ -1.47
HLA-F-228ENST00000486194 MUC5BQ9HC84 5762 aaPredicted RBP5.83□□□□□ -1.48
HLA-F-228ENST00000486194 LCE1EQ5T753 118 aa5.65□□□□□ -1.5
HLA-F-228ENST00000486194 LUZP6Q538Z0 58 aa5.33□□□□□ -1.56
HLA-F-228ENST00000486194 LCE1BQ5T7P3 118 aa5.29□□□□□ -1.56
HLA-F-228ENST00000486194 KRTAP4-2Q9BYR5 136 aa5.28□□□□□ -1.56
HLA-F-228ENST00000486194 LCE1CQ5T751 118 aa5.23□□□□□ -1.57
HLA-F-228ENST00000486194 LCE3DQ9BYE3 92 aa5.01□□□□□ -1.61
HLA-F-228ENST00000486194 NDUFAF8A1L188 74 aa4.95□□□□□ -1.62
HLA-F-228ENST00000486194 KRTAP4-12Q9BQ66 201 aa4.78□□□□□ -1.64
HLA-F-228ENST00000486194 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.75□□□□□ -1.65
HLA-F-228ENST00000486194 KRTAP5-11Q6L8G4 156 aa4.74□□□□□ -1.65
HLA-F-228ENST00000486194 LCE3EQ5T5B0 92 aa4.71□□□□□ -1.66
HLA-F-228ENST00000486194 LCE1FQ5T754 118 aa4.65□□□□□ -1.67
HLA-F-228ENST00000486194 KRTAP21-2Q3LI59 83 aa4.34□□□□□ -1.71
HLA-F-228ENST00000486194 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
HLA-F-228ENST00000486194 PHGR1C9JFL3 82 aa4.16□□□□□ -1.74
HLA-F-228ENST00000486194 INE1O15225 51 aa4.16□□□□□ -1.74
HLA-F-228ENST00000486194 KRTAP4-4Q9BYR3 166 aa3.95□□□□□ -1.78
HLA-F-228ENST00000486194 H3BS24 57 aa3.81□□□□□ -1.8
HLA-F-228ENST00000486194 MUC19Q7Z5P9 8384 aa3.72□□□□□ -1.81
HLA-F-228ENST00000486194 PRM1P04553 51 aa3.56□□□□□ -1.84
HLA-F-228ENST00000486194 KRTAP21-1Q3LI58 79 aa3.19□□□□□ -1.9
HLA-F-228ENST00000486194 MUC16Q8WXI7 14507 aa2.67□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 52.5 ms