RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 SPCS1Q9Y6A9 102 aa2.16□□□□□ -2.06
SMC4-217ENST00000485867 UQCR10Q9UDW1 63 aa2.15□□□□□ -2.07
SMC4-217ENST00000485867 H0Y9P7 68 aa2.13□□□□□ -2.07
SMC4-217ENST00000485867 ATOX1O00244 68 aa2.12□□□□□ -2.07
SMC4-217ENST00000485867 PYY3Q5JQD4 70 aa2.1□□□□□ -2.07
SMC4-217ENST00000485867 UQCRQO14949 82 aa2.09□□□□□ -2.07
SMC4-217ENST00000485867 C10orf95Q9H7T3 257 aa2.09□□□□□ -2.07
SMC4-217ENST00000485867 M0R143 59 aa2.07□□□□□ -2.08
SMC4-217ENST00000485867 KRTAP13-4Q3LI77 160 aa2.07□□□□□ -2.08
SMC4-217ENST00000485867 DMAC1Q96GE9 116 aa2.06□□□□□ -2.08
SMC4-217ENST00000485867 TAX1BP3O14907 124 aa2.05□□□□□ -2.08
SMC4-217ENST00000485867 LINC00208Q96KT6 92 aa2.05□□□□□ -2.08
SMC4-217ENST00000485867 TRAV7A0A075B6U4 112 aa1.99□□□□□ -2.09
SMC4-217ENST00000485867 MP68P56378 58 aa1.96□□□□□ -2.1
SMC4-217ENST00000485867 SPTSSBQ8NFR3 76 aa1.96□□□□□ -2.1
SMC4-217ENST00000485867 KRTAP12-3P60328 96 aa1.95□□□□□ -2.1
SMC4-217ENST00000485867 KRTAP6-1Q3LI64 71 aa1.94□□□□□ -2.1
SMC4-217ENST00000485867 MT1AP04731 61 aa1.93□□□□□ -2.1
SMC4-217ENST00000485867 HIST1H4AP62805 103 aaKnown RBP1.93□□□□□ -2.1
SMC4-217ENST00000485867 KRTAP6-2Q3LI66 62 aa1.93□□□□□ -2.1
SMC4-217ENST00000485867 SPINT4Q6UDR6 99 aa1.93□□□□□ -2.1
SMC4-217ENST00000485867 ACYP2P14621 99 aa1.91□□□□□ -2.1
SMC4-217ENST00000485867 TNP1P09430 55 aa1.9□□□□□ -2.11
SMC4-217ENST00000485867 KRTAP12-1P59990 96 aa1.9□□□□□ -2.11
SMC4-217ENST00000485867 H3BPC8 53 aa1.89□□□□□ -2.11
SMC4-217ENST00000485867 ATP5EP2Q5VTU8 51 aa1.89□□□□□ -2.11
SMC4-217ENST00000485867 CHKB-CPT1BH3BT56 60 aa1.87□□□□□ -2.11
SMC4-217ENST00000485867 SPATA8Q6RVD6 105 aa1.85□□□□□ -2.11
SMC4-217ENST00000485867 ETDBQ3ZM63 59 aa1.83□□□□□ -2.12
SMC4-217ENST00000485867 SMIM26A0A096LP01 95 aa1.82□□□□□ -2.12
SMC4-217ENST00000485867 FAM240AA0A1B0GVK7 77 aa1.78□□□□□ -2.12
SMC4-217ENST00000485867 F8W1H4 67 aa1.76□□□□□ -2.13
SMC4-217ENST00000485867 V9GYY9 64 aa1.76□□□□□ -2.13
SMC4-217ENST00000485867 A0A1B0GU33 70 aa1.75□□□□□ -2.13
SMC4-217ENST00000485867 SCGB1A1P11684 91 aa1.75□□□□□ -2.13
SMC4-217ENST00000485867 KRTAP25-1Q3LHN0 102 aa1.75□□□□□ -2.13
SMC4-217ENST00000485867 LINC00643Q86TS7 51 aa1.75□□□□□ -2.13
SMC4-217ENST00000485867 PSPHP1O15172 72 aa1.74□□□□□ -2.13
SMC4-217ENST00000485867 SMIM6P0DI80 62 aa1.74□□□□□ -2.13
SMC4-217ENST00000485867 SERP1Q9Y6X1 66 aa1.73□□□□□ -2.13
SMC4-217ENST00000485867 GTF2H5Q6ZYL4 71 aa1.72□□□□□ -2.13
SMC4-217ENST00000485867 COL5A1-AS1Q5SY13 56 aa1.7□□□□□ -2.14
SMC4-217ENST00000485867 SPANXA2-OT1Q8N9U9 137 aa1.7□□□□□ -2.14
SMC4-217ENST00000485867 LUZP6Q538Z0 58 aa1.68□□□□□ -2.14
SMC4-217ENST00000485867 PRO0628Q9UI54 55 aa1.66□□□□□ -2.14
SMC4-217ENST00000485867 COA5Q86WW8 74 aa1.63□□□□□ -2.15
SMC4-217ENST00000485867 SNURFQ9Y675 71 aa1.61□□□□□ -2.15
SMC4-217ENST00000485867 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
SMC4-217ENST00000485867 SERP2Q8N6R1 65 aa1.58□□□□□ -2.16
SMC4-217ENST00000485867 ANAPC13Q9BS18 74 aa1.57□□□□□ -2.16
SMC4-217ENST00000485867 SMIM20Q8N5G0 67 aa1.55□□□□□ -2.16
SMC4-217ENST00000485867 A0A1B0GU69 56 aa1.54□□□□□ -2.16
SMC4-217ENST00000485867 K7ERS5 55 aa1.52□□□□□ -2.17
SMC4-217ENST00000485867 A6NED7 52 aa1.49□□□□□ -2.17
SMC4-217ENST00000485867 H7BZZ5 65 aa1.49□□□□□ -2.17
SMC4-217ENST00000485867 PRR15LQ9BU68 103 aa1.47□□□□□ -2.17
SMC4-217ENST00000485867 LOC105371267A0A1B0GV96 52 aa1.45□□□□□ -2.18
SMC4-217ENST00000485867 J3QR89 54 aa1.39□□□□□ -2.19
SMC4-217ENST00000485867 RPS28P62857 69 aaKnown RBP1.33□□□□□ -2.2
SMC4-217ENST00000485867 UQCR11O14957 56 aa1.32□□□□□ -2.2
SMC4-217ENST00000485867 A0A1B0GV90 55 aa1.28□□□□□ -2.2
SMC4-217ENST00000485867 LINC01558Q9Y6Z2 57 aa1.28□□□□□ -2.2
SMC4-217ENST00000485867 MIR22HGQ0VDD5 57 aa1.26□□□□□ -2.21
SMC4-217ENST00000485867 PMAIP1Q13794 54 aa1.25□□□□□ -2.21
SMC4-217ENST00000485867 COX7CP15954 63 aa1.22□□□□□ -2.21
SMC4-217ENST00000485867 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
SMC4-217ENST00000485867 CDC42SE1Q9NRR8 79 aa1.18□□□□□ -2.22
SMC4-217ENST00000485867 K7ERU9 68 aa1.15□□□□□ -2.23
SMC4-217ENST00000485867 TMEM258P61165 79 aa1.15□□□□□ -2.23
SMC4-217ENST00000485867 KTN1-AS1Q86SY8 53 aa1.15□□□□□ -2.23
SMC4-217ENST00000485867 ROMO1P60602 79 aa1.14□□□□□ -2.23
SMC4-217ENST00000485867 Q1T7F1 81 aa1.13□□□□□ -2.23
SMC4-217ENST00000485867 ATP5EP56381 51 aaPredicted RBP1.07□□□□□ -2.24
SMC4-217ENST00000485867 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
SMC4-217ENST00000485867 CCDC179H3BU77 68 aa0.97□□□□□ -2.25
SMC4-217ENST00000485867 INE1O15225 51 aa0.86□□□□□ -2.27
SMC4-217ENST00000485867 BRK1Q8WUW1 75 aa0.7□□□□□ -2.3
SMC4-217ENST00000485867 PRM1P04553 51 aa0.57□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 101.1 ms