RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 SYNE2Q8WXH0 6885 aaKnown RBP5.16□□□□□ -1.58
TTC3-219ENST00000485402 MUC12Q9UKN1 5478 aa5.15□□□□□ -1.59
TTC3-219ENST00000485402 MT1EP04732 61 aa5.12□□□□□ -1.59
TTC3-219ENST00000485402 SPRR2FQ96RM1 72 aa5.1□□□□□ -1.59
TTC3-219ENST00000485402 KRTAP9-6A0A140TA67 174 aa5.08□□□□□ -1.6
TTC3-219ENST00000485402 KRTAP2-3P0C7H8 128 aa5.03□□□□□ -1.6
TTC3-219ENST00000485402 KRTAP2-4Q9BYR9 128 aa5.03□□□□□ -1.6
TTC3-219ENST00000485402 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
TTC3-219ENST00000485402 MT1LQ93083 61 aa5.03□□□□□ -1.6
TTC3-219ENST00000485402 DSTQ03001 7570 aaKnown RBP4.94□□□□□ -1.62
TTC3-219ENST00000485402 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.94□□□□□ -1.62
TTC3-219ENST00000485402 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
TTC3-219ENST00000485402 KRTAP19-3Q7Z4W3 81 aa4.92□□□□□ -1.62
TTC3-219ENST00000485402 MDN1Q9NU22 5596 aa4.91□□□□□ -1.62
TTC3-219ENST00000485402 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
TTC3-219ENST00000485402 MT1GP13640 62 aa4.86□□□□□ -1.63
TTC3-219ENST00000485402 KRTAP5-9P26371 169 aa4.85□□□□□ -1.63
TTC3-219ENST00000485402 MT1MQ8N339 61 aa4.83□□□□□ -1.64
TTC3-219ENST00000485402 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
TTC3-219ENST00000485402 SPRR2EP22531 72 aa4.8□□□□□ -1.64
TTC3-219ENST00000485402 SPRR2BP35325 72 aa4.8□□□□□ -1.64
TTC3-219ENST00000485402 SPRR2AP35326 72 aa4.8□□□□□ -1.64
TTC3-219ENST00000485402 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
TTC3-219ENST00000485402 LCE1AQ5T7P2 110 aa4.78□□□□□ -1.64
TTC3-219ENST00000485402 KRTAP6-3Q3LI67 103 aa4.77□□□□□ -1.65
TTC3-219ENST00000485402 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
TTC3-219ENST00000485402 KRTAP12-4P60329 112 aa4.75□□□□□ -1.65
TTC3-219ENST00000485402 KRTAP9-7A8MTY7 169 aa4.68□□□□□ -1.66
TTC3-219ENST00000485402 OBSCNQ5VST9 7968 aa4.62□□□□□ -1.67
TTC3-219ENST00000485402 SPRR2DP22532 72 aa4.61□□□□□ -1.67
TTC3-219ENST00000485402 LCE3BQ5TA77 95 aa4.59□□□□□ -1.67
TTC3-219ENST00000485402 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
TTC3-219ENST00000485402 NEBP20929 6669 aa4.47□□□□□ -1.69
TTC3-219ENST00000485402 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
TTC3-219ENST00000485402 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
TTC3-219ENST00000485402 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
TTC3-219ENST00000485402 PRM1P04553 51 aa4.23□□□□□ -1.73
TTC3-219ENST00000485402 MT1AP04731 61 aa4.23□□□□□ -1.73
TTC3-219ENST00000485402 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
TTC3-219ENST00000485402 KRTAP20-1Q3LI63 56 aa4.13□□□□□ -1.75
TTC3-219ENST00000485402 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
TTC3-219ENST00000485402 MT4P47944 62 aa4.08□□□□□ -1.76
TTC3-219ENST00000485402 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
TTC3-219ENST00000485402 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
TTC3-219ENST00000485402 KRTAP4-6Q9BYQ5 205 aa4.01□□□□□ -1.77
TTC3-219ENST00000485402 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
TTC3-219ENST00000485402 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
TTC3-219ENST00000485402 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
TTC3-219ENST00000485402 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.79
TTC3-219ENST00000485402 MT3P25713 68 aa3.87□□□□□ -1.79
TTC3-219ENST00000485402 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
TTC3-219ENST00000485402 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
TTC3-219ENST00000485402 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
TTC3-219ENST00000485402 AHNAK2Q8IVF2 5795 aa3.36□□□□□ -1.87
TTC3-219ENST00000485402 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
TTC3-219ENST00000485402 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
TTC3-219ENST00000485402 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
TTC3-219ENST00000485402 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
TTC3-219ENST00000485402 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
TTC3-219ENST00000485402 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
TTC3-219ENST00000485402 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
TTC3-219ENST00000485402 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
TTC3-219ENST00000485402 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
TTC3-219ENST00000485402 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
TTC3-219ENST00000485402 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
TTC3-219ENST00000485402 KRTAP5-7Q6L8G8 165 aa2.99□□□□□ -1.93
TTC3-219ENST00000485402 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.94
TTC3-219ENST00000485402 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
TTC3-219ENST00000485402 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
TTC3-219ENST00000485402 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
TTC3-219ENST00000485402 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
TTC3-219ENST00000485402 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
TTC3-219ENST00000485402 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
TTC3-219ENST00000485402 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
TTC3-219ENST00000485402 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
TTC3-219ENST00000485402 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
TTC3-219ENST00000485402 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
TTC3-219ENST00000485402 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms