RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 LCE1DQ5T752 114 aa5.57□□□□□ -1.52
SIK3-211ENST00000485363 LCE4AQ5TA78 99 aa5.57□□□□□ -1.52
SIK3-211ENST00000485363 HMCN1Q96RW7 5635 aa5.53□□□□□ -1.52
SIK3-211ENST00000485363 LINC01558Q9Y6Z2 57 aa5.52□□□□□ -1.53
SIK3-211ENST00000485363 MT4P47944 62 aa5.51□□□□□ -1.53
SIK3-211ENST00000485363 KRTAP4-12Q9BQ66 201 aa5.51□□□□□ -1.53
SIK3-211ENST00000485363 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
SIK3-211ENST00000485363 KRTAP5-4Q6L8H1 288 aa5.43□□□□□ -1.54
SIK3-211ENST00000485363 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
SIK3-211ENST00000485363 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
SIK3-211ENST00000485363 UQCR11O14957 56 aa5.42□□□□□ -1.54
SIK3-211ENST00000485363 KRTAP12-3P60328 96 aa5.42□□□□□ -1.54
SIK3-211ENST00000485363 TMEM258P61165 79 aa5.38□□□□□ -1.55
SIK3-211ENST00000485363 AHNAK2Q8IVF2 5795 aa5.37□□□□□ -1.55
SIK3-211ENST00000485363 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
SIK3-211ENST00000485363 MIR22HGQ0VDD5 57 aa5.29□□□□□ -1.56
SIK3-211ENST00000485363 KRTAP25-1Q3LHN0 102 aa5.28□□□□□ -1.56
SIK3-211ENST00000485363 SVIPQ8NHG7 77 aa5.27□□□□□ -1.57
SIK3-211ENST00000485363 K7ERS5 55 aa5.23□□□□□ -1.57
SIK3-211ENST00000485363 KRTAP5-10Q6L8G5 202 aa5.21□□□□□ -1.58
SIK3-211ENST00000485363 KRTAP5-5Q701N2 237 aaPredicted RBP5.18□□□□□ -1.58
SIK3-211ENST00000485363 V9GYY9 64 aa5.14□□□□□ -1.59
SIK3-211ENST00000485363 KRTAP20-2Q3LI61 65 aa5.13□□□□□ -1.59
SIK3-211ENST00000485363 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
SIK3-211ENST00000485363 PSPHP1O15172 72 aa5.12□□□□□ -1.59
SIK3-211ENST00000485363 PCP4P48539 62 aa5.12□□□□□ -1.59
SIK3-211ENST00000485363 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
SIK3-211ENST00000485363 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
SIK3-211ENST00000485363 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
SIK3-211ENST00000485363 Q1T7F1 81 aa5.08□□□□□ -1.6
SIK3-211ENST00000485363 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
SIK3-211ENST00000485363 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
SIK3-211ENST00000485363 KRTAP5-7Q6L8G8 165 aa5.03□□□□□ -1.6
SIK3-211ENST00000485363 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
SIK3-211ENST00000485363 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
SIK3-211ENST00000485363 KRTAP4-2Q9BYR5 136 aa4.98□□□□□ -1.61
SIK3-211ENST00000485363 RPS28P62857 69 aaKnown RBP4.97□□□□□ -1.61
SIK3-211ENST00000485363 A6NED7 52 aa4.95□□□□□ -1.62
SIK3-211ENST00000485363 CDC42SE1Q9NRR8 79 aa4.92□□□□□ -1.62
SIK3-211ENST00000485363 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
SIK3-211ENST00000485363 ROMO1P60602 79 aa4.84□□□□□ -1.63
SIK3-211ENST00000485363 MT1AP04731 61 aa4.81□□□□□ -1.64
SIK3-211ENST00000485363 H3BS24 57 aa4.77□□□□□ -1.65
SIK3-211ENST00000485363 KRTAP6-1Q3LI64 71 aa4.77□□□□□ -1.65
SIK3-211ENST00000485363 KRTAP5-2Q701N4 177 aa4.74□□□□□ -1.65
SIK3-211ENST00000485363 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
SIK3-211ENST00000485363 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
SIK3-211ENST00000485363 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
SIK3-211ENST00000485363 KRTAP5-8O75690 187 aa4.55□□□□□ -1.68
SIK3-211ENST00000485363 AHNAKQ09666 5890 aaKnown RBP4.45□□□□□ -1.7
SIK3-211ENST00000485363 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
SIK3-211ENST00000485363 MT3P25713 68 aa4.41□□□□□ -1.7
SIK3-211ENST00000485363 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
SIK3-211ENST00000485363 BRK1Q8WUW1 75 aa4.32□□□□□ -1.72
SIK3-211ENST00000485363 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
SIK3-211ENST00000485363 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
SIK3-211ENST00000485363 PMAIP1Q13794 54 aa4.14□□□□□ -1.75
SIK3-211ENST00000485363 PRO0628Q9UI54 55 aa4.12□□□□□ -1.75
SIK3-211ENST00000485363 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
SIK3-211ENST00000485363 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
SIK3-211ENST00000485363 KTN1-AS1Q86SY8 53 aa3.83□□□□□ -1.8
SIK3-211ENST00000485363 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
SIK3-211ENST00000485363 PRAC1Q96KF2 57 aa3.74□□□□□ -1.81
SIK3-211ENST00000485363 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
SIK3-211ENST00000485363 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
SIK3-211ENST00000485363 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
SIK3-211ENST00000485363 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
SIK3-211ENST00000485363 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
SIK3-211ENST00000485363 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
SIK3-211ENST00000485363 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
SIK3-211ENST00000485363 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
SIK3-211ENST00000485363 NDUFAF8A1L188 74 aa3.04□□□□□ -1.92
SIK3-211ENST00000485363 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
SIK3-211ENST00000485363 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
SIK3-211ENST00000485363 INE1O15225 51 aa2.5□□□□□ -2.01
SIK3-211ENST00000485363 PRM1P04553 51 aa2.46□□□□□ -2.02
SIK3-211ENST00000485363 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
SIK3-211ENST00000485363 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms