RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 SERP1Q9Y6X1 66 aa4.53□□□□□ -1.68
NUP188-206ENST00000485158 TNP1P09430 55 aa4.5□□□□□ -1.69
NUP188-206ENST00000485158 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
NUP188-206ENST00000485158 COA5Q86WW8 74 aa4.48□□□□□ -1.69
NUP188-206ENST00000485158 A0A1B0GV90 55 aa4.47□□□□□ -1.69
NUP188-206ENST00000485158 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
NUP188-206ENST00000485158 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
NUP188-206ENST00000485158 SMIM26A0A096LP01 95 aa4.39□□□□□ -1.71
NUP188-206ENST00000485158 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
NUP188-206ENST00000485158 A8MU10 97 aa4.35□□□□□ -1.71
NUP188-206ENST00000485158 SERP2Q8N6R1 65 aa4.35□□□□□ -1.71
NUP188-206ENST00000485158 SVIPQ8NHG7 77 aa4.35□□□□□ -1.71
NUP188-206ENST00000485158 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
NUP188-206ENST00000485158 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
NUP188-206ENST00000485158 AHNAKQ09666 5890 aaKnown RBP4.25□□□□□ -1.73
NUP188-206ENST00000485158 A0A1B0GU69 56 aa4.25□□□□□ -1.73
NUP188-206ENST00000485158 MUC5ACP98088 5654 aa4.24□□□□□ -1.73
NUP188-206ENST00000485158 K7ERU9 68 aa4.23□□□□□ -1.73
NUP188-206ENST00000485158 KRTAP5-8O75690 187 aa4.23□□□□□ -1.73
NUP188-206ENST00000485158 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
NUP188-206ENST00000485158 KRTAP4-12Q9BQ66 201 aa4.22□□□□□ -1.73
NUP188-206ENST00000485158 MUC5BQ9HC84 5762 aaPredicted RBP4.22□□□□□ -1.73
NUP188-206ENST00000485158 H7BZZ5 65 aa4.15□□□□□ -1.75
NUP188-206ENST00000485158 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
NUP188-206ENST00000485158 MT1AP04731 61 aa4.12□□□□□ -1.75
NUP188-206ENST00000485158 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
NUP188-206ENST00000485158 COX7CP15954 63 aa4.09□□□□□ -1.75
NUP188-206ENST00000485158 KRTAP25-1Q3LHN0 102 aa4.08□□□□□ -1.76
NUP188-206ENST00000485158 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
NUP188-206ENST00000485158 KRTAP9-9Q9BYP9 154 aa4.04□□□□□ -1.76
NUP188-206ENST00000485158 KRTAP15-1Q3LI76 137 aa4.03□□□□□ -1.76
NUP188-206ENST00000485158 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
NUP188-206ENST00000485158 PRR15LQ9BU68 103 aa4.01□□□□□ -1.77
NUP188-206ENST00000485158 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
NUP188-206ENST00000485158 LINC01558Q9Y6Z2 57 aa3.92□□□□□ -1.78
NUP188-206ENST00000485158 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
NUP188-206ENST00000485158 UQCR11O14957 56 aa3.89□□□□□ -1.79
NUP188-206ENST00000485158 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
NUP188-206ENST00000485158 PCP4P48539 62 aa3.81□□□□□ -1.8
NUP188-206ENST00000485158 MT3P25713 68 aa3.78□□□□□ -1.8
NUP188-206ENST00000485158 ATP5EP56381 51 aaPredicted RBP3.76□□□□□ -1.81
NUP188-206ENST00000485158 MIR22HGQ0VDD5 57 aa3.74□□□□□ -1.81
NUP188-206ENST00000485158 K7ERS5 55 aa3.73□□□□□ -1.81
NUP188-206ENST00000485158 A0A0A0MQY5 61 aa3.71□□□□□ -1.82
NUP188-206ENST00000485158 ANAPC13Q9BS18 74 aa3.68□□□□□ -1.82
NUP188-206ENST00000485158 CCDC179H3BU77 68 aa3.64□□□□□ -1.83
NUP188-206ENST00000485158 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
NUP188-206ENST00000485158 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
NUP188-206ENST00000485158 RPS28P62857 69 aaKnown RBP3.56□□□□□ -1.84
NUP188-206ENST00000485158 TMEM258P61165 79 aa3.5□□□□□ -1.85
NUP188-206ENST00000485158 Q1T7F1 81 aa3.5□□□□□ -1.85
NUP188-206ENST00000485158 CDC42SE1Q9NRR8 79 aa3.49□□□□□ -1.85
NUP188-206ENST00000485158 PSPHP1O15172 72 aa3.43□□□□□ -1.86
NUP188-206ENST00000485158 ROMO1P60602 79 aa3.42□□□□□ -1.86
NUP188-206ENST00000485158 V9GYY9 64 aa3.4□□□□□ -1.87
NUP188-206ENST00000485158 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
NUP188-206ENST00000485158 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
NUP188-206ENST00000485158 A6NED7 52 aa3.28□□□□□ -1.88
NUP188-206ENST00000485158 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
NUP188-206ENST00000485158 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
NUP188-206ENST00000485158 PRAC1Q96KF2 57 aa3.03□□□□□ -1.92
NUP188-206ENST00000485158 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
NUP188-206ENST00000485158 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
NUP188-206ENST00000485158 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
NUP188-206ENST00000485158 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
NUP188-206ENST00000485158 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
NUP188-206ENST00000485158 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
NUP188-206ENST00000485158 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
NUP188-206ENST00000485158 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
NUP188-206ENST00000485158 BRK1Q8WUW1 75 aa2.3□□□□□ -2.04
NUP188-206ENST00000485158 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
NUP188-206ENST00000485158 PMAIP1Q13794 54 aa2.16□□□□□ -2.06
NUP188-206ENST00000485158 LUZP6Q538Z0 58 aa1.92□□□□□ -2.1
NUP188-206ENST00000485158 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
NUP188-206ENST00000485158 PRM1P04553 51 aa1.71□□□□□ -2.14
NUP188-206ENST00000485158 PRO0628Q9UI54 55 aa1.69□□□□□ -2.14
NUP188-206ENST00000485158 KTN1-AS1Q86SY8 53 aa1.64□□□□□ -2.15
NUP188-206ENST00000485158 INE1O15225 51 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 102 ms