RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 KRTAP4-3Q9BYR4 195 aa6.98□□□□□ -1.29
ACTB-212ENST00000484841 ATP5EP56381 51 aaPredicted RBP6.97□□□□□ -1.29
ACTB-212ENST00000484841 KRTAP5-4Q6L8H1 288 aa6.91□□□□□ -1.3
ACTB-212ENST00000484841 HMCN1Q96RW7 5635 aa6.88□□□□□ -1.31
ACTB-212ENST00000484841 TMEM258P61165 79 aa6.88□□□□□ -1.31
ACTB-212ENST00000484841 KRTAP12-3P60328 96 aa6.84□□□□□ -1.31
ACTB-212ENST00000484841 KRTAP4-6Q9BYQ5 205 aa6.82□□□□□ -1.32
ACTB-212ENST00000484841 LINC01558Q9Y6Z2 57 aa6.79□□□□□ -1.32
ACTB-212ENST00000484841 KRTAP4-7Q9BYR0 210 aa6.76□□□□□ -1.33
ACTB-212ENST00000484841 UQCR11O14957 56 aa6.74□□□□□ -1.33
ACTB-212ENST00000484841 KRTAP5-10Q6L8G5 202 aa6.73□□□□□ -1.33
ACTB-212ENST00000484841 AHNAK2Q8IVF2 5795 aa6.68□□□□□ -1.34
ACTB-212ENST00000484841 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
ACTB-212ENST00000484841 K7ERS5 55 aa6.58□□□□□ -1.36
ACTB-212ENST00000484841 PCP4P48539 62 aa6.58□□□□□ -1.36
ACTB-212ENST00000484841 KRTAP20-2Q3LI61 65 aa6.57□□□□□ -1.36
ACTB-212ENST00000484841 KRTAP5-3Q6L8H2 238 aa6.57□□□□□ -1.36
ACTB-212ENST00000484841 MIR22HGQ0VDD5 57 aa6.56□□□□□ -1.36
ACTB-212ENST00000484841 KRTAP12-4P60329 112 aa6.55□□□□□ -1.36
ACTB-212ENST00000484841 SPRR5A0A1B0GTR4 108 aa6.53□□□□□ -1.36
ACTB-212ENST00000484841 KRTAP5-5Q701N2 237 aaPredicted RBP6.53□□□□□ -1.36
ACTB-212ENST00000484841 KRTAP5-7Q6L8G8 165 aa6.51□□□□□ -1.37
ACTB-212ENST00000484841 V9GYY9 64 aa6.48□□□□□ -1.37
ACTB-212ENST00000484841 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
ACTB-212ENST00000484841 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
ACTB-212ENST00000484841 Q1T7F1 81 aa6.38□□□□□ -1.39
ACTB-212ENST00000484841 RPS28P62857 69 aaKnown RBP6.34□□□□□ -1.39
ACTB-212ENST00000484841 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
ACTB-212ENST00000484841 KRTAP15-1Q3LI76 137 aa6.33□□□□□ -1.4
ACTB-212ENST00000484841 PSPHP1O15172 72 aa6.32□□□□□ -1.4
ACTB-212ENST00000484841 LCE3CQ5T5A8 94 aa6.26□□□□□ -1.41
ACTB-212ENST00000484841 SYNE1Q8NF91 8797 aaKnown RBP6.22□□□□□ -1.41
ACTB-212ENST00000484841 A6NED7 52 aa6.17□□□□□ -1.42
ACTB-212ENST00000484841 CDC42SE1Q9NRR8 79 aa6.13□□□□□ -1.43
ACTB-212ENST00000484841 MT1AP04731 61 aa6.09□□□□□ -1.43
ACTB-212ENST00000484841 KRTAP4-11Q9BYQ6 195 aa6.06□□□□□ -1.44
ACTB-212ENST00000484841 KRTAP6-1Q3LI64 71 aa6.04□□□□□ -1.44
ACTB-212ENST00000484841 KRTAP5-2Q701N4 177 aa6.01□□□□□ -1.45
ACTB-212ENST00000484841 ROMO1P60602 79 aa5.98□□□□□ -1.45
ACTB-212ENST00000484841 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
ACTB-212ENST00000484841 KRTAP6-2Q3LI66 62 aa5.83□□□□□ -1.48
ACTB-212ENST00000484841 KRTAP9-6A8MVA2 160 aa5.82□□□□□ -1.48
ACTB-212ENST00000484841 KRTAP5-8O75690 187 aa5.82□□□□□ -1.48
ACTB-212ENST00000484841 OBSCNQ5VST9 7968 aa5.66□□□□□ -1.5
ACTB-212ENST00000484841 BRK1Q8WUW1 75 aa5.66□□□□□ -1.5
ACTB-212ENST00000484841 KRTAP9-9Q9BYP9 154 aa5.65□□□□□ -1.5
ACTB-212ENST00000484841 MT3P25713 68 aa5.62□□□□□ -1.51
ACTB-212ENST00000484841 MUC5ACP98088 5654 aa5.52□□□□□ -1.53
ACTB-212ENST00000484841 MUC5BQ9HC84 5762 aaPredicted RBP5.49□□□□□ -1.53
ACTB-212ENST00000484841 AHNAKQ09666 5890 aaKnown RBP5.48□□□□□ -1.53
ACTB-212ENST00000484841 KRTAP5-1Q6L8H4 278 aa5.42□□□□□ -1.54
ACTB-212ENST00000484841 PMAIP1Q13794 54 aa5.33□□□□□ -1.56
ACTB-212ENST00000484841 PRO0628Q9UI54 55 aa5.22□□□□□ -1.57
ACTB-212ENST00000484841 LCE1EQ5T753 118 aa5.17□□□□□ -1.58
ACTB-212ENST00000484841 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
ACTB-212ENST00000484841 LCE1BQ5T7P3 118 aa4.94□□□□□ -1.62
ACTB-212ENST00000484841 KTN1-AS1Q86SY8 53 aa4.93□□□□□ -1.62
ACTB-212ENST00000484841 KRTAP4-2Q9BYR5 136 aa4.85□□□□□ -1.63
ACTB-212ENST00000484841 SVIPQ8NHG7 77 aa4.83□□□□□ -1.64
ACTB-212ENST00000484841 LCE1CQ5T751 118 aa4.79□□□□□ -1.64
ACTB-212ENST00000484841 KRTAP4-12Q9BQ66 201 aa4.52□□□□□ -1.69
ACTB-212ENST00000484841 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
ACTB-212ENST00000484841 KRTAP5-11Q6L8G4 156 aa4.34□□□□□ -1.71
ACTB-212ENST00000484841 LCE1FQ5T754 118 aa4.31□□□□□ -1.72
ACTB-212ENST00000484841 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
ACTB-212ENST00000484841 LUZP6Q538Z0 58 aa4.29□□□□□ -1.72
ACTB-212ENST00000484841 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
ACTB-212ENST00000484841 PHGR1C9JFL3 82 aa3.99□□□□□ -1.77
ACTB-212ENST00000484841 KRTAP21-2Q3LI59 83 aa3.96□□□□□ -1.78
ACTB-212ENST00000484841 NDUFAF8A1L188 74 aa3.69□□□□□ -1.82
ACTB-212ENST00000484841 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
ACTB-212ENST00000484841 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.86
ACTB-212ENST00000484841 H3BS24 57 aa3.44□□□□□ -1.86
ACTB-212ENST00000484841 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
ACTB-212ENST00000484841 INE1O15225 51 aa3.07□□□□□ -1.92
ACTB-212ENST00000484841 PRM1P04553 51 aa3.04□□□□□ -1.92
ACTB-212ENST00000484841 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
ACTB-212ENST00000484841 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 82.7 ms