RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-208ENST00000484254 K7ERS5 55 aa7.89□□□□□ -1.15
CNTNAP3B-208ENST00000484254 PP632Q6XCG6 107 aa7.89□□□□□ -1.15
CNTNAP3B-208ENST00000484254 DSTQ03001 7570 aaKnown RBP7.89□□□□□ -1.15
CNTNAP3B-208ENST00000484254 MT1MQ8N339 61 aa7.83□□□□□ -1.16
CNTNAP3B-208ENST00000484254 KRTAP25-1Q3LHN0 102 aa7.79□□□□□ -1.16
CNTNAP3B-208ENST00000484254 PCP4P48539 62 aa7.77□□□□□ -1.17
CNTNAP3B-208ENST00000484254 RPS28P62857 69 aaKnown RBP7.76□□□□□ -1.17
CNTNAP3B-208ENST00000484254 KRTAP12-3P60328 96 aa7.75□□□□□ -1.17
CNTNAP3B-208ENST00000484254 A6NED7 52 aa7.74□□□□□ -1.17
CNTNAP3B-208ENST00000484254 KRTAP4-3Q9BYR4 195 aa7.63□□□□□ -1.19
CNTNAP3B-208ENST00000484254 KRTAP4-9Q9BYQ8 210 aa7.55□□□□□ -1.2
CNTNAP3B-208ENST00000484254 KRTAP23-1A1A580 65 aa7.52□□□□□ -1.21
CNTNAP3B-208ENST00000484254 KRTAP4-7Q9BYR0 210 aa7.51□□□□□ -1.21
CNTNAP3B-208ENST00000484254 CDC42SE1Q9NRR8 79 aa7.49□□□□□ -1.21
CNTNAP3B-208ENST00000484254 LCE4AQ5TA78 99 aa7.47□□□□□ -1.21
CNTNAP3B-208ENST00000484254 LCE1DQ5T752 114 aa7.41□□□□□ -1.22
CNTNAP3B-208ENST00000484254 ROMO1P60602 79 aa7.39□□□□□ -1.23
CNTNAP3B-208ENST00000484254 KRTAP5-4Q6L8H1 288 aa7.37□□□□□ -1.23
CNTNAP3B-208ENST00000484254 KRTAP19-4Q3LI73 84 aa7.36□□□□□ -1.23
CNTNAP3B-208ENST00000484254 MT4P47944 62 aa7.34□□□□□ -1.23
CNTNAP3B-208ENST00000484254 KRTAP15-1Q3LI76 137 aa7.31□□□□□ -1.24
CNTNAP3B-208ENST00000484254 HMCN1Q96RW7 5635 aa7.29□□□□□ -1.24
CNTNAP3B-208ENST00000484254 GPR98Q8WXG9 6306 aa7.22□□□□□ -1.25
CNTNAP3B-208ENST00000484254 KRTAP5-5Q701N2 237 aaPredicted RBP7.17□□□□□ -1.26
CNTNAP3B-208ENST00000484254 LCE3CQ5T5A8 94 aa7.16□□□□□ -1.26
CNTNAP3B-208ENST00000484254 KRTAP4-6Q9BYQ5 205 aa7.16□□□□□ -1.26
CNTNAP3B-208ENST00000484254 LOC100996750A0A140TA64 210 aa7.11□□□□□ -1.27
CNTNAP3B-208ENST00000484254 AHNAK2Q8IVF2 5795 aa6.97□□□□□ -1.29
CNTNAP3B-208ENST00000484254 SPRR5A0A1B0GTR4 108 aa6.94□□□□□ -1.3
CNTNAP3B-208ENST00000484254 KRTAP12-4P60329 112 aa6.93□□□□□ -1.3
CNTNAP3B-208ENST00000484254 KRTAP20-2Q3LI61 65 aa6.93□□□□□ -1.3
CNTNAP3B-208ENST00000484254 SVIPQ8NHG7 77 aa6.86□□□□□ -1.31
CNTNAP3B-208ENST00000484254 SYNE1Q8NF91 8797 aaKnown RBP6.83□□□□□ -1.32
CNTNAP3B-208ENST00000484254 BRK1Q8WUW1 75 aa6.8□□□□□ -1.32
CNTNAP3B-208ENST00000484254 KRTAP5-10Q6L8G5 202 aa6.79□□□□□ -1.32
CNTNAP3B-208ENST00000484254 KRTAP9-6A8MVA2 160 aa6.75□□□□□ -1.33
CNTNAP3B-208ENST00000484254 MT1AP04731 61 aa6.73□□□□□ -1.33
CNTNAP3B-208ENST00000484254 KRTAP5-3Q6L8H2 238 aa6.73□□□□□ -1.33
CNTNAP3B-208ENST00000484254 KRTAP6-1Q3LI64 71 aa6.67□□□□□ -1.34
CNTNAP3B-208ENST00000484254 KRTAP5-7Q6L8G8 165 aa6.52□□□□□ -1.37
CNTNAP3B-208ENST00000484254 KRTAP5-2Q701N4 177 aa6.49□□□□□ -1.37
CNTNAP3B-208ENST00000484254 KRTAP9-4Q9BYQ2 154 aa6.49□□□□□ -1.37
CNTNAP3B-208ENST00000484254 PMAIP1Q13794 54 aa6.41□□□□□ -1.38
CNTNAP3B-208ENST00000484254 KRTAP6-2Q3LI66 62 aa6.34□□□□□ -1.39
CNTNAP3B-208ENST00000484254 KRTAP4-11Q9BYQ6 195 aa6.29□□□□□ -1.4
CNTNAP3B-208ENST00000484254 MT3P25713 68 aa6.15□□□□□ -1.42
CNTNAP3B-208ENST00000484254 PRAC1Q96KF2 57 aa6.14□□□□□ -1.43
CNTNAP3B-208ENST00000484254 KRTAP4-12Q9BQ66 201 aa6.1□□□□□ -1.43
CNTNAP3B-208ENST00000484254 KRTAP5-8O75690 187 aa6.08□□□□□ -1.44
CNTNAP3B-208ENST00000484254 PRO0628Q9UI54 55 aa6.04□□□□□ -1.44
CNTNAP3B-208ENST00000484254 OBSCNQ5VST9 7968 aa5.98□□□□□ -1.45
CNTNAP3B-208ENST00000484254 KRTAP9-9Q9BYP9 154 aa5.88□□□□□ -1.47
CNTNAP3B-208ENST00000484254 KRTAP5-1Q6L8H4 278 aa5.78□□□□□ -1.48
CNTNAP3B-208ENST00000484254 H3BS24 57 aa5.77□□□□□ -1.49
CNTNAP3B-208ENST00000484254 KTN1-AS1Q86SY8 53 aa5.75□□□□□ -1.49
CNTNAP3B-208ENST00000484254 MUC5BQ9HC84 5762 aaPredicted RBP5.71□□□□□ -1.5
CNTNAP3B-208ENST00000484254 AHNAKQ09666 5890 aaKnown RBP5.69□□□□□ -1.5
CNTNAP3B-208ENST00000484254 MUC5ACP98088 5654 aa5.66□□□□□ -1.5
CNTNAP3B-208ENST00000484254 LCE1EQ5T753 118 aa5.61□□□□□ -1.51
CNTNAP3B-208ENST00000484254 KRTAP4-2Q9BYR5 136 aa5.33□□□□□ -1.56
CNTNAP3B-208ENST00000484254 LCE1BQ5T7P3 118 aa5.25□□□□□ -1.57
CNTNAP3B-208ENST00000484254 LCE1CQ5T751 118 aa5.21□□□□□ -1.58
CNTNAP3B-208ENST00000484254 LCE3DQ9BYE3 92 aa5.19□□□□□ -1.58
CNTNAP3B-208ENST00000484254 LUZP6Q538Z0 58 aa5.17□□□□□ -1.58
CNTNAP3B-208ENST00000484254 LCE3EQ5T5B0 92 aa4.92□□□□□ -1.62
CNTNAP3B-208ENST00000484254 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.76□□□□□ -1.65
CNTNAP3B-208ENST00000484254 KRTAP5-11Q6L8G4 156 aa4.7□□□□□ -1.66
CNTNAP3B-208ENST00000484254 LCE1FQ5T754 118 aa4.53□□□□□ -1.68
CNTNAP3B-208ENST00000484254 A0A0A0MQY5 61 aa4.43□□□□□ -1.7
CNTNAP3B-208ENST00000484254 KRTAP21-2Q3LI59 83 aa4.4□□□□□ -1.71
CNTNAP3B-208ENST00000484254 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
CNTNAP3B-208ENST00000484254 PHGR1C9JFL3 82 aa4.05□□□□□ -1.76
CNTNAP3B-208ENST00000484254 KRTAP4-4Q9BYR3 166 aa3.99□□□□□ -1.77
CNTNAP3B-208ENST00000484254 PRM1P04553 51 aa3.78□□□□□ -1.8
CNTNAP3B-208ENST00000484254 MUC19Q7Z5P9 8384 aa3.66□□□□□ -1.82
CNTNAP3B-208ENST00000484254 INE1O15225 51 aa3.45□□□□□ -1.86
CNTNAP3B-208ENST00000484254 KRTAP21-1Q3LI58 79 aa3□□□□□ -1.93
CNTNAP3B-208ENST00000484254 MUC16Q8WXI7 14507 aa2.66□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 54.9 ms