RNA–Protein interactions for RNA: ENST00000484181.5

PCCB-217, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-217ENST00000484181 MT1GP13640 62 aa5.66□□□□□ -1.5
PCCB-217ENST00000484181 SPRR2FQ96RM1 72 aa5.65□□□□□ -1.51
PCCB-217ENST00000484181 KRTAP4-7Q9BYR0 210 aa5.63□□□□□ -1.51
PCCB-217ENST00000484181 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.52
PCCB-217ENST00000484181 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.52
PCCB-217ENST00000484181 KRTAP9-6A0A140TA67 174 aa5.56□□□□□ -1.52
PCCB-217ENST00000484181 MT1MQ8N339 61 aa5.56□□□□□ -1.52
PCCB-217ENST00000484181 KRTAP9-6A8MVA2 160 aa5.56□□□□□ -1.52
PCCB-217ENST00000484181 MACF1Q9UPN3 7388 aaKnown RBP5.52□□□□□ -1.53
PCCB-217ENST00000484181 LCE5AQ5TCM9 118 aa5.5□□□□□ -1.53
PCCB-217ENST00000484181 KRTAP5-9P26371 169 aa5.47□□□□□ -1.53
PCCB-217ENST00000484181 MUC12Q9UKN1 5478 aa5.43□□□□□ -1.54
PCCB-217ENST00000484181 KRTAP4-3Q9BYR4 195 aa5.4□□□□□ -1.55
PCCB-217ENST00000484181 KRTAP2-3P0C7H8 128 aa5.33□□□□□ -1.56
PCCB-217ENST00000484181 KRTAP2-4Q9BYR9 128 aa5.33□□□□□ -1.56
PCCB-217ENST00000484181 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
PCCB-217ENST00000484181 LCE1AQ5T7P2 110 aa5.32□□□□□ -1.56
PCCB-217ENST00000484181 SYNE2Q8WXH0 6885 aaKnown RBP5.31□□□□□ -1.56
PCCB-217ENST00000484181 SPRR2EP22531 72 aa5.3□□□□□ -1.56
PCCB-217ENST00000484181 SPRR2BP35325 72 aa5.3□□□□□ -1.56
PCCB-217ENST00000484181 SPRR2AP35326 72 aa5.3□□□□□ -1.56
PCCB-217ENST00000484181 INE1O15225 51 aa5.28□□□□□ -1.56
PCCB-217ENST00000484181 KRTAP6-3Q3LI67 103 aa5.27□□□□□ -1.57
PCCB-217ENST00000484181 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.26□□□□□ -1.57
PCCB-217ENST00000484181 MDN1Q9NU22 5596 aa5.15□□□□□ -1.59
PCCB-217ENST00000484181 SPRR2DP22532 72 aa5.11□□□□□ -1.59
PCCB-217ENST00000484181 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
PCCB-217ENST00000484181 MT1AP04731 61 aa5□□□□□ -1.61
PCCB-217ENST00000484181 DSTQ03001 7570 aaKnown RBP4.99□□□□□ -1.61
PCCB-217ENST00000484181 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
PCCB-217ENST00000484181 KRTAP6-1Q3LI64 71 aa4.9□□□□□ -1.62
PCCB-217ENST00000484181 LCE3BQ5TA77 95 aa4.86□□□□□ -1.63
PCCB-217ENST00000484181 NEBP20929 6669 aa4.8□□□□□ -1.64
PCCB-217ENST00000484181 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
PCCB-217ENST00000484181 KRTAP4-12Q9BQ66 201 aa4.66□□□□□ -1.66
PCCB-217ENST00000484181 KRTAP12-4P60329 112 aa4.64□□□□□ -1.67
PCCB-217ENST00000484181 KRTAP9-9Q9BYP9 154 aa4.64□□□□□ -1.67
PCCB-217ENST00000484181 KRTAP5-4Q6L8H1 288 aa4.63□□□□□ -1.67
PCCB-217ENST00000484181 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.68
PCCB-217ENST00000484181 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
PCCB-217ENST00000484181 KRTAP4-9Q9BYQ8 210 aa4.55□□□□□ -1.68
PCCB-217ENST00000484181 MT3P25713 68 aa4.54□□□□□ -1.68
PCCB-217ENST00000484181 LCE4AQ5TA78 99 aa4.54□□□□□ -1.68
PCCB-217ENST00000484181 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
PCCB-217ENST00000484181 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
PCCB-217ENST00000484181 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
PCCB-217ENST00000484181 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
PCCB-217ENST00000484181 KRTAP20-1Q3LI63 56 aa4.41□□□□□ -1.7
PCCB-217ENST00000484181 MT4P47944 62 aa4.38□□□□□ -1.71
PCCB-217ENST00000484181 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
PCCB-217ENST00000484181 KRTAP4-2Q9BYR5 136 aa4.31□□□□□ -1.72
PCCB-217ENST00000484181 KRTAP5-2Q701N4 177 aa4.24□□□□□ -1.73
PCCB-217ENST00000484181 HMCN1Q96RW7 5635 aa4.16□□□□□ -1.74
PCCB-217ENST00000484181 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.75
PCCB-217ENST00000484181 KRTAP5-3Q6L8H2 238 aa4.13□□□□□ -1.75
PCCB-217ENST00000484181 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
PCCB-217ENST00000484181 PRM1P04553 51 aa3.99□□□□□ -1.77
PCCB-217ENST00000484181 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
PCCB-217ENST00000484181 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
PCCB-217ENST00000484181 KRTAP5-10Q6L8G5 202 aa3.61□□□□□ -1.83
PCCB-217ENST00000484181 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
PCCB-217ENST00000484181 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
PCCB-217ENST00000484181 MUC5ACP98088 5654 aa3.58□□□□□ -1.84
PCCB-217ENST00000484181 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
PCCB-217ENST00000484181 AHNAK2Q8IVF2 5795 aa3.55□□□□□ -1.84
PCCB-217ENST00000484181 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
PCCB-217ENST00000484181 KRTAP5-7Q6L8G8 165 aa3.49□□□□□ -1.85
PCCB-217ENST00000484181 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
PCCB-217ENST00000484181 KRTAP21-2Q3LI59 83 aa3.19□□□□□ -1.9
PCCB-217ENST00000484181 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
PCCB-217ENST00000484181 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
PCCB-217ENST00000484181 MUC5BQ9HC84 5762 aaPredicted RBP2.98□□□□□ -1.93
PCCB-217ENST00000484181 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
PCCB-217ENST00000484181 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
PCCB-217ENST00000484181 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
PCCB-217ENST00000484181 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
PCCB-217ENST00000484181 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
PCCB-217ENST00000484181 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 324.1 ms