RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
RTFDC1-208ENST00000484084 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
RTFDC1-208ENST00000484084 SPATA8Q6RVD6 105 aa2.76□□□□□ -1.97
RTFDC1-208ENST00000484084 CHKB-CPT1BH3BT56 60 aa2.75□□□□□ -1.97
RTFDC1-208ENST00000484084 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
RTFDC1-208ENST00000484084 SPINT4Q6UDR6 99 aa2.74□□□□□ -1.97
RTFDC1-208ENST00000484084 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
RTFDC1-208ENST00000484084 KRTAP19-4Q3LI73 84 aa2.73□□□□□ -1.97
RTFDC1-208ENST00000484084 OBSCNQ5VST9 7968 aa2.72□□□□□ -1.97
RTFDC1-208ENST00000484084 KRTAP12-3P60328 96 aa2.7□□□□□ -1.98
RTFDC1-208ENST00000484084 SCGB1A1P11684 91 aa2.69□□□□□ -1.98
RTFDC1-208ENST00000484084 SVIPQ8NHG7 77 aa2.68□□□□□ -1.98
RTFDC1-208ENST00000484084 TNP1P09430 55 aa2.65□□□□□ -1.99
RTFDC1-208ENST00000484084 A0A1B0GU33 70 aa2.63□□□□□ -1.99
RTFDC1-208ENST00000484084 SPANXA2-OT1Q8N9U9 137 aa2.63□□□□□ -1.99
RTFDC1-208ENST00000484084 SNURFQ9Y675 71 aa2.63□□□□□ -1.99
RTFDC1-208ENST00000484084 SMIM20Q8N5G0 67 aa2.62□□□□□ -1.99
RTFDC1-208ENST00000484084 A8MU10 97 aa2.61□□□□□ -1.99
RTFDC1-208ENST00000484084 KRTAP6-1Q3LI64 71 aa2.61□□□□□ -1.99
RTFDC1-208ENST00000484084 COA5Q86WW8 74 aa2.58□□□□□ -2
RTFDC1-208ENST00000484084 SERP2Q8N6R1 65 aa2.58□□□□□ -2
RTFDC1-208ENST00000484084 MT1AP04731 61 aa2.57□□□□□ -2
RTFDC1-208ENST00000484084 SERP1Q9Y6X1 66 aa2.57□□□□□ -2
RTFDC1-208ENST00000484084 COX7CP15954 63 aa2.55□□□□□ -2
RTFDC1-208ENST00000484084 SEC61GP60059 68 aa2.54□□□□□ -2
RTFDC1-208ENST00000484084 ANAPC13Q9BS18 74 aa2.54□□□□□ -2
RTFDC1-208ENST00000484084 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2
RTFDC1-208ENST00000484084 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
RTFDC1-208ENST00000484084 SMIM26A0A096LP01 95 aa2.5□□□□□ -2.01
RTFDC1-208ENST00000484084 CCDC179H3BU77 68 aa2.49□□□□□ -2.01
RTFDC1-208ENST00000484084 H7BZZ5 65 aa2.48□□□□□ -2.01
RTFDC1-208ENST00000484084 LCE3CQ5T5A8 94 aa2.48□□□□□ -2.01
RTFDC1-208ENST00000484084 KRTAP9-6A8MVA2 160 aa2.45□□□□□ -2.02
RTFDC1-208ENST00000484084 PCP4P48539 62 aa2.44□□□□□ -2.02
RTFDC1-208ENST00000484084 A0A1B0GU69 56 aa2.41□□□□□ -2.02
RTFDC1-208ENST00000484084 ATP5EP56381 51 aaPredicted RBP2.41□□□□□ -2.02
RTFDC1-208ENST00000484084 TMEM258P61165 79 aa2.41□□□□□ -2.02
RTFDC1-208ENST00000484084 KRTAP15-1Q3LI76 137 aa2.41□□□□□ -2.02
RTFDC1-208ENST00000484084 KRTAP25-1Q3LHN0 102 aa2.39□□□□□ -2.03
RTFDC1-208ENST00000484084 MT3P25713 68 aa2.32□□□□□ -2.04
RTFDC1-208ENST00000484084 H3BS24 57 aa2.31□□□□□ -2.04
RTFDC1-208ENST00000484084 RPS28P62857 69 aaKnown RBP2.31□□□□□ -2.04
RTFDC1-208ENST00000484084 KRTAP23-1A1A580 65 aa2.28□□□□□ -2.04
RTFDC1-208ENST00000484084 LINC01558Q9Y6Z2 57 aa2.27□□□□□ -2.05
RTFDC1-208ENST00000484084 Q1T7F1 81 aa2.26□□□□□ -2.05
RTFDC1-208ENST00000484084 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
RTFDC1-208ENST00000484084 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
RTFDC1-208ENST00000484084 V9GYY9 64 aa2.25□□□□□ -2.05
RTFDC1-208ENST00000484084 PRR15LQ9BU68 103 aa2.23□□□□□ -2.05
RTFDC1-208ENST00000484084 PSPHP1O15172 72 aa2.18□□□□□ -2.06
RTFDC1-208ENST00000484084 UQCR11O14957 56 aa2.17□□□□□ -2.06
RTFDC1-208ENST00000484084 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
RTFDC1-208ENST00000484084 MIR22HGQ0VDD5 57 aa2.12□□□□□ -2.07
RTFDC1-208ENST00000484084 A6NED7 52 aa2.11□□□□□ -2.07
RTFDC1-208ENST00000484084 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
RTFDC1-208ENST00000484084 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
RTFDC1-208ENST00000484084 CDC42SE1Q9NRR8 79 aa2.09□□□□□ -2.07
RTFDC1-208ENST00000484084 K7ERS5 55 aa2.04□□□□□ -2.08
RTFDC1-208ENST00000484084 BRK1Q8WUW1 75 aa2.02□□□□□ -2.09
RTFDC1-208ENST00000484084 A0A0A0MQY5 61 aa1.98□□□□□ -2.09
RTFDC1-208ENST00000484084 ROMO1P60602 79 aa1.96□□□□□ -2.1
RTFDC1-208ENST00000484084 PRO0628Q9UI54 55 aa1.95□□□□□ -2.1
RTFDC1-208ENST00000484084 PMAIP1Q13794 54 aa1.92□□□□□ -2.1
RTFDC1-208ENST00000484084 LCE1FQ5T754 118 aa1.92□□□□□ -2.1
RTFDC1-208ENST00000484084 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
RTFDC1-208ENST00000484084 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
RTFDC1-208ENST00000484084 KTN1-AS1Q86SY8 53 aa1.81□□□□□ -2.12
RTFDC1-208ENST00000484084 PRAC1Q96KF2 57 aa1.79□□□□□ -2.12
RTFDC1-208ENST00000484084 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
RTFDC1-208ENST00000484084 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
RTFDC1-208ENST00000484084 LCE3DQ9BYE3 92 aa1.68□□□□□ -2.14
RTFDC1-208ENST00000484084 NDUFAF8A1L188 74 aa1.52□□□□□ -2.17
RTFDC1-208ENST00000484084 LCE3EQ5T5B0 92 aa1.52□□□□□ -2.17
RTFDC1-208ENST00000484084 LUZP6Q538Z0 58 aa1.51□□□□□ -2.17
RTFDC1-208ENST00000484084 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
RTFDC1-208ENST00000484084 INE1O15225 51 aa1.19□□□□□ -2.22
RTFDC1-208ENST00000484084 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
RTFDC1-208ENST00000484084 PRM1P04553 51 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 283.7 ms