RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 KRTAP13-4Q3LI77 160 aa3.67□□□□□ -1.82
COL8A1-207ENST00000483969 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
COL8A1-207ENST00000483969 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
COL8A1-207ENST00000483969 PRR15LQ9BU68 103 aa3.64□□□□□ -1.83
COL8A1-207ENST00000483969 SPATA8Q6RVD6 105 aa3.63□□□□□ -1.83
COL8A1-207ENST00000483969 CAMK2N1Q7Z7J9 78 aa3.63□□□□□ -1.83
COL8A1-207ENST00000483969 A0A0D9SG42 100 aa3.62□□□□□ -1.83
COL8A1-207ENST00000483969 SMIM26A0A096LP01 95 aa3.61□□□□□ -1.83
COL8A1-207ENST00000483969 LINC01558Q9Y6Z2 57 aa3.6□□□□□ -1.83
COL8A1-207ENST00000483969 SPINT4Q6UDR6 99 aa3.59□□□□□ -1.83
COL8A1-207ENST00000483969 KRTAP8-1Q8IUC2 63 aa3.55□□□□□ -1.84
COL8A1-207ENST00000483969 KRTAP12-1P59990 96 aa3.53□□□□□ -1.84
COL8A1-207ENST00000483969 UQCR11O14957 56 aa3.51□□□□□ -1.85
COL8A1-207ENST00000483969 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
COL8A1-207ENST00000483969 V9GYY9 64 aa3.51□□□□□ -1.85
COL8A1-207ENST00000483969 NEBP20929 6669 aa3.48□□□□□ -1.85
COL8A1-207ENST00000483969 Q1T7F1 81 aa3.45□□□□□ -1.86
COL8A1-207ENST00000483969 KMT2DO14686 5537 aa3.43□□□□□ -1.86
COL8A1-207ENST00000483969 SPRR2EP22531 72 aa3.43□□□□□ -1.86
COL8A1-207ENST00000483969 SPRR2BP35325 72 aa3.43□□□□□ -1.86
COL8A1-207ENST00000483969 SPRR2AP35326 72 aa3.43□□□□□ -1.86
COL8A1-207ENST00000483969 MIR22HGQ0VDD5 57 aa3.43□□□□□ -1.86
COL8A1-207ENST00000483969 MUC12Q9UKN1 5478 aa3.41□□□□□ -1.86
COL8A1-207ENST00000483969 PSPHP1O15172 72 aa3.41□□□□□ -1.86
COL8A1-207ENST00000483969 RPS28P62857 69 aaKnown RBP3.41□□□□□ -1.86
COL8A1-207ENST00000483969 K7ERS5 55 aa3.39□□□□□ -1.87
COL8A1-207ENST00000483969 TNP1P09430 55 aa3.38□□□□□ -1.87
COL8A1-207ENST00000483969 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
COL8A1-207ENST00000483969 C10orf95Q9H7T3 257 aa3.37□□□□□ -1.87
COL8A1-207ENST00000483969 MDN1Q9NU22 5596 aa3.36□□□□□ -1.87
COL8A1-207ENST00000483969 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.87
COL8A1-207ENST00000483969 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.87
COL8A1-207ENST00000483969 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
COL8A1-207ENST00000483969 A6NED7 52 aa3.32□□□□□ -1.88
COL8A1-207ENST00000483969 SPRR2DP22532 72 aa3.32□□□□□ -1.88
COL8A1-207ENST00000483969 KRTAP19-7Q3SYF9 63 aa3.3□□□□□ -1.88
COL8A1-207ENST00000483969 MT1EP04732 61 aa3.28□□□□□ -1.88
COL8A1-207ENST00000483969 KRTAP19-5Q3LI72 72 aa3.27□□□□□ -1.89
COL8A1-207ENST00000483969 KRTAP25-1Q3LHN0 102 aa3.25□□□□□ -1.89
COL8A1-207ENST00000483969 KRTAP2-1Q9BYU5 128 aa3.25□□□□□ -1.89
COL8A1-207ENST00000483969 KRTAP19-3Q7Z4W3 81 aa3.24□□□□□ -1.89
COL8A1-207ENST00000483969 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
COL8A1-207ENST00000483969 MT1GP13640 62 aa3.21□□□□□ -1.9
COL8A1-207ENST00000483969 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
COL8A1-207ENST00000483969 CDC42SE1Q9NRR8 79 aa3.19□□□□□ -1.9
COL8A1-207ENST00000483969 KRTAP12-3P60328 96 aa3.16□□□□□ -1.9
COL8A1-207ENST00000483969 MT1LQ93083 61 aa3.16□□□□□ -1.9
COL8A1-207ENST00000483969 ROMO1P60602 79 aa3.14□□□□□ -1.91
COL8A1-207ENST00000483969 MT1MQ8N339 61 aa3.11□□□□□ -1.91
COL8A1-207ENST00000483969 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
COL8A1-207ENST00000483969 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
COL8A1-207ENST00000483969 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
COL8A1-207ENST00000483969 KRTAP5-7Q6L8G8 165 aa2.99□□□□□ -1.93
COL8A1-207ENST00000483969 BRK1Q8WUW1 75 aa2.99□□□□□ -1.93
COL8A1-207ENST00000483969 MT4P47944 62 aa2.88□□□□□ -1.95
COL8A1-207ENST00000483969 PMAIP1Q13794 54 aa2.84□□□□□ -1.95
COL8A1-207ENST00000483969 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
COL8A1-207ENST00000483969 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
COL8A1-207ENST00000483969 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
COL8A1-207ENST00000483969 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
COL8A1-207ENST00000483969 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
COL8A1-207ENST00000483969 PRO0628Q9UI54 55 aa2.72□□□□□ -1.97
COL8A1-207ENST00000483969 MT1AP04731 61 aa2.7□□□□□ -1.98
COL8A1-207ENST00000483969 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
COL8A1-207ENST00000483969 KRTAP6-1Q3LI64 71 aa2.65□□□□□ -1.99
COL8A1-207ENST00000483969 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
COL8A1-207ENST00000483969 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
COL8A1-207ENST00000483969 KTN1-AS1Q86SY8 53 aa2.57□□□□□ -2
COL8A1-207ENST00000483969 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2
COL8A1-207ENST00000483969 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
COL8A1-207ENST00000483969 LUZP6Q538Z0 58 aa2.3□□□□□ -2.04
COL8A1-207ENST00000483969 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
COL8A1-207ENST00000483969 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
COL8A1-207ENST00000483969 INE1O15225 51 aa1.74□□□□□ -2.13
COL8A1-207ENST00000483969 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
COL8A1-207ENST00000483969 PRM1P04553 51 aa1.59□□□□□ -2.15
COL8A1-207ENST00000483969 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
COL8A1-207ENST00000483969 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 63.1 ms