RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 ATP5EP56381 51 aaPredicted RBP6.92□□□□□ -1.3
HPS4-213ENST00000483631 MT4P47944 62 aa6.86□□□□□ -1.31
HPS4-213ENST00000483631 KRTAP5-4Q6L8H1 288 aa6.86□□□□□ -1.31
HPS4-213ENST00000483631 KRTAP5-10Q6L8G5 202 aa6.85□□□□□ -1.31
HPS4-213ENST00000483631 LINC01558Q9Y6Z2 57 aa6.84□□□□□ -1.31
HPS4-213ENST00000483631 CCDC179H3BU77 68 aa6.83□□□□□ -1.32
HPS4-213ENST00000483631 KRTAP4-3Q9BYR4 195 aa6.82□□□□□ -1.32
HPS4-213ENST00000483631 KRTAP12-3P60328 96 aa6.75□□□□□ -1.33
HPS4-213ENST00000483631 UQCR11O14957 56 aa6.71□□□□□ -1.34
HPS4-213ENST00000483631 KRTAP5-7Q6L8G8 165 aa6.67□□□□□ -1.34
HPS4-213ENST00000483631 KRTAP4-6Q9BYQ5 205 aa6.66□□□□□ -1.34
HPS4-213ENST00000483631 TMEM258P61165 79 aa6.65□□□□□ -1.34
HPS4-213ENST00000483631 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
HPS4-213ENST00000483631 KRTAP25-1Q3LHN0 102 aa6.59□□□□□ -1.35
HPS4-213ENST00000483631 KRTAP5-3Q6L8H2 238 aa6.53□□□□□ -1.36
HPS4-213ENST00000483631 MIR22HGQ0VDD5 57 aa6.51□□□□□ -1.37
HPS4-213ENST00000483631 KRTAP19-4Q3LI73 84 aa6.51□□□□□ -1.37
HPS4-213ENST00000483631 KRTAP5-5Q701N2 237 aaPredicted RBP6.51□□□□□ -1.37
HPS4-213ENST00000483631 K7ERS5 55 aa6.47□□□□□ -1.37
HPS4-213ENST00000483631 SPRR5A0A1B0GTR4 108 aa6.45□□□□□ -1.38
HPS4-213ENST00000483631 KRTAP20-2Q3LI61 65 aa6.44□□□□□ -1.38
HPS4-213ENST00000483631 KRTAP23-1A1A580 65 aa6.39□□□□□ -1.39
HPS4-213ENST00000483631 KRTAP12-4P60329 112 aa6.39□□□□□ -1.39
HPS4-213ENST00000483631 V9GYY9 64 aa6.36□□□□□ -1.39
HPS4-213ENST00000483631 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
HPS4-213ENST00000483631 Q1T7F1 81 aa6.27□□□□□ -1.41
HPS4-213ENST00000483631 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
HPS4-213ENST00000483631 PSPHP1O15172 72 aa6.25□□□□□ -1.41
HPS4-213ENST00000483631 SYNE1Q8NF91 8797 aaKnown RBP6.21□□□□□ -1.42
HPS4-213ENST00000483631 LCE3CQ5T5A8 94 aa6.2□□□□□ -1.42
HPS4-213ENST00000483631 CDC42SE1Q9NRR8 79 aa6.08□□□□□ -1.44
HPS4-213ENST00000483631 A6NED7 52 aa6.07□□□□□ -1.44
HPS4-213ENST00000483631 MT1AP04731 61 aa6.02□□□□□ -1.45
HPS4-213ENST00000483631 KRTAP5-2Q701N4 177 aa5.98□□□□□ -1.45
HPS4-213ENST00000483631 ROMO1P60602 79 aa5.96□□□□□ -1.46
HPS4-213ENST00000483631 KRTAP6-1Q3LI64 71 aa5.95□□□□□ -1.46
HPS4-213ENST00000483631 RPS28P62857 69 aaKnown RBP5.94□□□□□ -1.46
HPS4-213ENST00000483631 AHNAKQ09666 5890 aaKnown RBP5.93□□□□□ -1.46
HPS4-213ENST00000483631 KRTAP4-11Q9BYQ6 195 aa5.93□□□□□ -1.46
HPS4-213ENST00000483631 MUC5ACP98088 5654 aa5.88□□□□□ -1.47
HPS4-213ENST00000483631 MUC5BQ9HC84 5762 aaPredicted RBP5.84□□□□□ -1.47
HPS4-213ENST00000483631 KRTAP9-4Q9BYQ2 154 aa5.83□□□□□ -1.48
HPS4-213ENST00000483631 KRTAP9-6A8MVA2 160 aa5.81□□□□□ -1.48
HPS4-213ENST00000483631 KRTAP5-8O75690 187 aa5.72□□□□□ -1.49
HPS4-213ENST00000483631 KRTAP6-2Q3LI66 62 aa5.71□□□□□ -1.5
HPS4-213ENST00000483631 MT3P25713 68 aa5.53□□□□□ -1.52
HPS4-213ENST00000483631 OBSCNQ5VST9 7968 aa5.51□□□□□ -1.53
HPS4-213ENST00000483631 KRTAP9-9Q9BYP9 154 aa5.48□□□□□ -1.53
HPS4-213ENST00000483631 PCP4P48539 62 aa5.43□□□□□ -1.54
HPS4-213ENST00000483631 KRTAP5-1Q6L8H4 278 aa5.37□□□□□ -1.55
HPS4-213ENST00000483631 LCE1EQ5T753 118 aa5.15□□□□□ -1.59
HPS4-213ENST00000483631 BRK1Q8WUW1 75 aa4.97□□□□□ -1.61
HPS4-213ENST00000483631 KRTAP4-2Q9BYR5 136 aa4.82□□□□□ -1.64
HPS4-213ENST00000483631 LCE1CQ5T751 118 aa4.76□□□□□ -1.65
HPS4-213ENST00000483631 LCE1BQ5T7P3 118 aa4.76□□□□□ -1.65
HPS4-213ENST00000483631 PMAIP1Q13794 54 aa4.68□□□□□ -1.66
HPS4-213ENST00000483631 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
HPS4-213ENST00000483631 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
HPS4-213ENST00000483631 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
HPS4-213ENST00000483631 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
HPS4-213ENST00000483631 KRTAP5-11Q6L8G4 156 aa4.33□□□□□ -1.72
HPS4-213ENST00000483631 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
HPS4-213ENST00000483631 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
HPS4-213ENST00000483631 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
HPS4-213ENST00000483631 PRO0628Q9UI54 55 aa4.16□□□□□ -1.74
HPS4-213ENST00000483631 KTN1-AS1Q86SY8 53 aa4.04□□□□□ -1.76
HPS4-213ENST00000483631 PHGR1C9JFL3 82 aa4.01□□□□□ -1.77
HPS4-213ENST00000483631 KRTAP21-2Q3LI59 83 aa3.95□□□□□ -1.78
HPS4-213ENST00000483631 LUZP6Q538Z0 58 aa3.94□□□□□ -1.78
HPS4-213ENST00000483631 H3BS24 57 aa3.71□□□□□ -1.82
HPS4-213ENST00000483631 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
HPS4-213ENST00000483631 MUC19Q7Z5P9 8384 aa3.42□□□□□ -1.86
HPS4-213ENST00000483631 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
HPS4-213ENST00000483631 PRM1P04553 51 aa3□□□□□ -1.93
HPS4-213ENST00000483631 NDUFAF8A1L188 74 aa2.84□□□□□ -1.95
HPS4-213ENST00000483631 A0A0A0MQY5 61 aa2.73□□□□□ -1.97
HPS4-213ENST00000483631 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.03
HPS4-213ENST00000483631 INE1O15225 51 aa2.32□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 1152.1 ms