RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 KRTAP4-8Q9BYQ9 185 aa2.63□□□□□ -1.99
COL4A5-205ENST00000483338 KRTAP4-7Q9BYR0 210 aa2.62□□□□□ -1.99
COL4A5-205ENST00000483338 KRTAP2-2Q9BYT5 123 aa2.61□□□□□ -1.99
COL4A5-205ENST00000483338 SYNE1Q8NF91 8797 aaKnown RBP2.59□□□□□ -1.99
COL4A5-205ENST00000483338 SSPOA2VEC9 5147 aa2.59□□□□□ -1.99
COL4A5-205ENST00000483338 KRTAP9-6A0A140TA67 174 aa2.59□□□□□ -2
COL4A5-205ENST00000483338 KRTAP19-6Q3LI70 58 aa2.59□□□□□ -2
COL4A5-205ENST00000483338 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
COL4A5-205ENST00000483338 LCE1AQ5T7P2 110 aa2.55□□□□□ -2
COL4A5-205ENST00000483338 DSTQ03001 7570 aaKnown RBP2.55□□□□□ -2
COL4A5-205ENST00000483338 FCGBPQ9Y6R7 5405 aaPredicted RBP2.52□□□□□ -2.01
COL4A5-205ENST00000483338 KRTAP19-7Q3SYF9 63 aa2.45□□□□□ -2.02
COL4A5-205ENST00000483338 SPRR2FQ96RM1 72 aa2.44□□□□□ -2.02
COL4A5-205ENST00000483338 PRM1P04553 51 aa2.43□□□□□ -2.02
COL4A5-205ENST00000483338 KRTAP9-7A8MTY7 169 aa2.43□□□□□ -2.02
COL4A5-205ENST00000483338 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.43□□□□□ -2.02
COL4A5-205ENST00000483338 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
COL4A5-205ENST00000483338 KRTAP5-3Q6L8H2 238 aa2.42□□□□□ -2.02
COL4A5-205ENST00000483338 MACF1Q9UPN3 7388 aaKnown RBP2.4□□□□□ -2.02
COL4A5-205ENST00000483338 MT1GP13640 62 aa2.4□□□□□ -2.02
COL4A5-205ENST00000483338 MT1LQ93083 61 aa2.4□□□□□ -2.02
COL4A5-205ENST00000483338 KRTAP4-3Q9BYR4 195 aa2.39□□□□□ -2.03
COL4A5-205ENST00000483338 SYNE2Q8WXH0 6885 aaKnown RBP2.38□□□□□ -2.03
COL4A5-205ENST00000483338 KRTAP19-4Q3LI73 84 aa2.38□□□□□ -2.03
COL4A5-205ENST00000483338 KRTAP5-5Q701N2 237 aaPredicted RBP2.37□□□□□ -2.03
COL4A5-205ENST00000483338 KRTAP4-9Q9BYQ8 210 aa2.36□□□□□ -2.03
COL4A5-205ENST00000483338 MUC12Q9UKN1 5478 aa2.34□□□□□ -2.03
COL4A5-205ENST00000483338 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.04
COL4A5-205ENST00000483338 LCE3BQ5TA77 95 aa2.33□□□□□ -2.04
COL4A5-205ENST00000483338 SPRR2EP22531 72 aa2.33□□□□□ -2.04
COL4A5-205ENST00000483338 SPRR2BP35325 72 aa2.33□□□□□ -2.04
COL4A5-205ENST00000483338 SPRR2AP35326 72 aa2.33□□□□□ -2.04
COL4A5-205ENST00000483338 LCE1DQ5T752 114 aa2.33□□□□□ -2.04
COL4A5-205ENST00000483338 KRTAP4-2Q9BYR5 136 aa2.32□□□□□ -2.04
COL4A5-205ENST00000483338 MT1EP04732 61 aa2.32□□□□□ -2.04
COL4A5-205ENST00000483338 KRTAP9-9Q9BYP9 154 aa2.3□□□□□ -2.04
COL4A5-205ENST00000483338 KRTAP9-4Q9BYQ2 154 aa2.3□□□□□ -2.04
COL4A5-205ENST00000483338 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
COL4A5-205ENST00000483338 MT1AP04731 61 aa2.25□□□□□ -2.05
COL4A5-205ENST00000483338 KRTAP19-3Q7Z4W3 81 aa2.25□□□□□ -2.05
COL4A5-205ENST00000483338 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
COL4A5-205ENST00000483338 SPRR2DP22532 72 aa2.24□□□□□ -2.05
COL4A5-205ENST00000483338 KRTAP5-9P26371 169 aa2.24□□□□□ -2.05
COL4A5-205ENST00000483338 MDN1Q9NU22 5596 aa2.21□□□□□ -2.06
COL4A5-205ENST00000483338 KRTAP6-2Q3LI66 62 aa2.19□□□□□ -2.06
COL4A5-205ENST00000483338 MT1MQ8N339 61 aa2.18□□□□□ -2.06
COL4A5-205ENST00000483338 LCE5AQ5TCM9 118 aa2.17□□□□□ -2.06
COL4A5-205ENST00000483338 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
COL4A5-205ENST00000483338 LCE1FQ5T754 118 aa2.13□□□□□ -2.07
COL4A5-205ENST00000483338 NEBP20929 6669 aa2.12□□□□□ -2.07
COL4A5-205ENST00000483338 KRTAP20-1Q3LI63 56 aa2.11□□□□□ -2.07
COL4A5-205ENST00000483338 KRTAP4-11Q9BYQ6 195 aa2.08□□□□□ -2.08
COL4A5-205ENST00000483338 KRTAP6-1Q3LI64 71 aa2.08□□□□□ -2.08
COL4A5-205ENST00000483338 MT4P47944 62 aa1.99□□□□□ -2.09
COL4A5-205ENST00000483338 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.99□□□□□ -2.09
COL4A5-205ENST00000483338 LCE4AQ5TA78 99 aa1.91□□□□□ -2.1
COL4A5-205ENST00000483338 MT3P25713 68 aa1.85□□□□□ -2.11
COL4A5-205ENST00000483338 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.12
COL4A5-205ENST00000483338 KRTAP5-4Q6L8H1 288 aa1.83□□□□□ -2.12
COL4A5-205ENST00000483338 KRTAP20-2Q3LI61 65 aa1.79□□□□□ -2.12
COL4A5-205ENST00000483338 LCE1BQ5T7P3 118 aa1.76□□□□□ -2.13
COL4A5-205ENST00000483338 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
COL4A5-205ENST00000483338 GPR98Q8WXG9 6306 aa1.65□□□□□ -2.15
COL4A5-205ENST00000483338 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
COL4A5-205ENST00000483338 KRTAP5-2Q701N4 177 aa1.62□□□□□ -2.15
COL4A5-205ENST00000483338 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
COL4A5-205ENST00000483338 KRTAP5-10Q6L8G5 202 aa1.6□□□□□ -2.15
COL4A5-205ENST00000483338 AHNAK2Q8IVF2 5795 aa1.59□□□□□ -2.15
COL4A5-205ENST00000483338 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
COL4A5-205ENST00000483338 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
COL4A5-205ENST00000483338 KRTAP5-1Q6L8H4 278 aa1.48□□□□□ -2.17
COL4A5-205ENST00000483338 KRTAP4-4Q9BYR3 166 aa1.46□□□□□ -2.18
COL4A5-205ENST00000483338 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
COL4A5-205ENST00000483338 KRTAP5-11Q6L8G4 156 aa1.33□□□□□ -2.2
COL4A5-205ENST00000483338 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
COL4A5-205ENST00000483338 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
COL4A5-205ENST00000483338 PHGR1C9JFL3 82 aa1.04□□□□□ -2.24
COL4A5-205ENST00000483338 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 137.4 ms