RNA–Protein interactions for RNA: ENST00000483282.1

C1orf43-208, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 3

Gene C1orf43, Length 456 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-208ENST00000483282 USH2AO75445 5202 aa3.08□□□□□ -1.92
C1orf43-208ENST00000483282 SSPOA2VEC9 5147 aa3.07□□□□□ -1.92
C1orf43-208ENST00000483282 KRTAP4-8A0A0G2JLE6 195 aa3.07□□□□□ -1.92
C1orf43-208ENST00000483282 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
C1orf43-208ENST00000483282 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
C1orf43-208ENST00000483282 KRTAP2-1Q9BYU5 128 aa3.04□□□□□ -1.92
C1orf43-208ENST00000483282 FCGBPQ9Y6R7 5405 aaPredicted RBP3.01□□□□□ -1.93
C1orf43-208ENST00000483282 KRTAP4-7Q9BYR0 210 aa3□□□□□ -1.93
C1orf43-208ENST00000483282 KRTAP10-7P60409 375 aaPredicted RBP2.98□□□□□ -1.93
C1orf43-208ENST00000483282 KRTAP19-5Q3LI72 72 aa2.98□□□□□ -1.93
C1orf43-208ENST00000483282 MT3P25713 68 aa2.96□□□□□ -1.94
C1orf43-208ENST00000483282 MT1EP04732 61 aa2.92□□□□□ -1.94
C1orf43-208ENST00000483282 LCE1DQ5T752 114 aa2.91□□□□□ -1.94
C1orf43-208ENST00000483282 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.94
C1orf43-208ENST00000483282 MT1LQ93083 61 aa2.89□□□□□ -1.95
C1orf43-208ENST00000483282 SYNE2Q8WXH0 6885 aaKnown RBP2.87□□□□□ -1.95
C1orf43-208ENST00000483282 KRTAP4-9Q9BYQ8 210 aa2.85□□□□□ -1.95
C1orf43-208ENST00000483282 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
C1orf43-208ENST00000483282 LCE1AQ5T7P2 110 aa2.84□□□□□ -1.95
C1orf43-208ENST00000483282 KRTAP19-6Q3LI70 58 aa2.82□□□□□ -1.96
C1orf43-208ENST00000483282 KRTAP6-3Q3LI67 103 aa2.8□□□□□ -1.96
C1orf43-208ENST00000483282 KRTAP19-7Q3SYF9 63 aa2.8□□□□□ -1.96
C1orf43-208ENST00000483282 KRTAP5-3Q6L8H2 238 aa2.79□□□□□ -1.96
C1orf43-208ENST00000483282 MT1GP13640 62 aa2.77□□□□□ -1.97
C1orf43-208ENST00000483282 MUC12Q9UKN1 5478 aa2.76□□□□□ -1.97
C1orf43-208ENST00000483282 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
C1orf43-208ENST00000483282 KRTAP20-1Q3LI63 56 aa2.74□□□□□ -1.97
C1orf43-208ENST00000483282 MT1AP04731 61 aa2.72□□□□□ -1.97
C1orf43-208ENST00000483282 KRTAP4-11Q9BYQ6 195 aa2.69□□□□□ -1.98
C1orf43-208ENST00000483282 KRTAP12-4P60329 112 aa2.68□□□□□ -1.98
C1orf43-208ENST00000483282 NEBP20929 6669 aa2.68□□□□□ -1.98
C1orf43-208ENST00000483282 MDN1Q9NU22 5596 aa2.65□□□□□ -1.99
C1orf43-208ENST00000483282 KRTAP19-3Q7Z4W3 81 aa2.64□□□□□ -1.99
C1orf43-208ENST00000483282 KMT2DO14686 5537 aa2.61□□□□□ -1.99
C1orf43-208ENST00000483282 MT1MQ8N339 61 aa2.6□□□□□ -1.99
C1orf43-208ENST00000483282 SPRR2EP22531 72 aa2.58□□□□□ -2
C1orf43-208ENST00000483282 SPRR2BP35325 72 aa2.58□□□□□ -2
C1orf43-208ENST00000483282 SPRR2AP35326 72 aa2.58□□□□□ -2
C1orf43-208ENST00000483282 SPRR2FQ96RM1 72 aa2.58□□□□□ -2
C1orf43-208ENST00000483282 KRTAP5-9P26371 169 aa2.57□□□□□ -2
C1orf43-208ENST00000483282 KRTAP2-2Q9BYT5 123 aa2.55□□□□□ -2
C1orf43-208ENST00000483282 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
C1orf43-208ENST00000483282 LCE1FQ5T754 118 aa2.54□□□□□ -2
C1orf43-208ENST00000483282 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
C1orf43-208ENST00000483282 SPRR2DP22532 72 aa2.49□□□□□ -2.01
C1orf43-208ENST00000483282 GPR98Q8WXG9 6306 aa2.32□□□□□ -2.04
C1orf43-208ENST00000483282 PRM1P04553 51 aa2.3□□□□□ -2.04
C1orf43-208ENST00000483282 DSTQ03001 7570 aaKnown RBP2.29□□□□□ -2.04
C1orf43-208ENST00000483282 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
C1orf43-208ENST00000483282 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
C1orf43-208ENST00000483282 KRTAP6-1Q3LI64 71 aa2.26□□□□□ -2.05
C1orf43-208ENST00000483282 MT4P47944 62 aa2.24□□□□□ -2.05
C1orf43-208ENST00000483282 KRTAP6-2Q3LI66 62 aa2.18□□□□□ -2.06
C1orf43-208ENST00000483282 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
C1orf43-208ENST00000483282 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
C1orf43-208ENST00000483282 KRTAP5-10Q6L8G5 202 aa2.11□□□□□ -2.07
C1orf43-208ENST00000483282 LCE1EQ5T753 118 aa2.08□□□□□ -2.08
C1orf43-208ENST00000483282 SYNE1Q8NF91 8797 aaKnown RBP2.05□□□□□ -2.08
C1orf43-208ENST00000483282 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.08
C1orf43-208ENST00000483282 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
C1orf43-208ENST00000483282 KRTAP5-4Q6L8H1 288 aa2.01□□□□□ -2.09
C1orf43-208ENST00000483282 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
C1orf43-208ENST00000483282 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
C1orf43-208ENST00000483282 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
C1orf43-208ENST00000483282 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
C1orf43-208ENST00000483282 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
C1orf43-208ENST00000483282 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
C1orf43-208ENST00000483282 MUC5ACP98088 5654 aa1.77□□□□□ -2.13
C1orf43-208ENST00000483282 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
C1orf43-208ENST00000483282 LCE1BQ5T7P3 118 aa1.76□□□□□ -2.13
C1orf43-208ENST00000483282 KRTAP5-1Q6L8H4 278 aa1.75□□□□□ -2.13
C1orf43-208ENST00000483282 OBSCNQ5VST9 7968 aa1.75□□□□□ -2.13
C1orf43-208ENST00000483282 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.15
C1orf43-208ENST00000483282 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
C1orf43-208ENST00000483282 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
C1orf43-208ENST00000483282 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
C1orf43-208ENST00000483282 MUC19Q7Z5P9 8384 aa1.11□□□□□ -2.23
C1orf43-208ENST00000483282 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 68 ms