RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
VTI1A-205ENST00000483122 USH2AO75445 5202 aa4.34□□□□□ -1.71
VTI1A-205ENST00000483122 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
VTI1A-205ENST00000483122 FSIP2Q5CZC0 6907 aa4.3□□□□□ -1.72
VTI1A-205ENST00000483122 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
VTI1A-205ENST00000483122 CRCT1Q9UGL9 99 aa4.26□□□□□ -1.73
VTI1A-205ENST00000483122 SSPOA2VEC9 5147 aa4.24□□□□□ -1.73
VTI1A-205ENST00000483122 KRTAP2-3P0C7H8 128 aa4.22□□□□□ -1.73
VTI1A-205ENST00000483122 KRTAP2-4Q9BYR9 128 aa4.22□□□□□ -1.73
VTI1A-205ENST00000483122 KRTAP2-1Q9BYU5 128 aa4.22□□□□□ -1.73
VTI1A-205ENST00000483122 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.74
VTI1A-205ENST00000483122 KMT2DO14686 5537 aa4.18□□□□□ -1.74
VTI1A-205ENST00000483122 FCGBPQ9Y6R7 5405 aaPredicted RBP4.09□□□□□ -1.75
VTI1A-205ENST00000483122 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.76
VTI1A-205ENST00000483122 KRTAP19-7Q3SYF9 63 aa4.01□□□□□ -1.77
VTI1A-205ENST00000483122 MACF1Q9UPN3 7388 aaKnown RBP3.97□□□□□ -1.77
VTI1A-205ENST00000483122 MT1LQ93083 61 aa3.92□□□□□ -1.78
VTI1A-205ENST00000483122 GPR98Q8WXG9 6306 aa3.91□□□□□ -1.78
VTI1A-205ENST00000483122 SYNE2Q8WXH0 6885 aaKnown RBP3.87□□□□□ -1.79
VTI1A-205ENST00000483122 MT1EP04732 61 aa3.85□□□□□ -1.79
VTI1A-205ENST00000483122 KRTAP12-4P60329 112 aa3.84□□□□□ -1.8
VTI1A-205ENST00000483122 KRTAP19-4Q3LI73 84 aa3.83□□□□□ -1.8
VTI1A-205ENST00000483122 KRTAP9-7A8MTY7 169 aa3.81□□□□□ -1.8
VTI1A-205ENST00000483122 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
VTI1A-205ENST00000483122 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
VTI1A-205ENST00000483122 KRTAP5-9P26371 169 aa3.75□□□□□ -1.81
VTI1A-205ENST00000483122 MT1GP13640 62 aa3.74□□□□□ -1.81
VTI1A-205ENST00000483122 SPRR2FQ96RM1 72 aa3.71□□□□□ -1.82
VTI1A-205ENST00000483122 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
VTI1A-205ENST00000483122 NEBP20929 6669 aa3.61□□□□□ -1.83
VTI1A-205ENST00000483122 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
VTI1A-205ENST00000483122 SPRR2EP22531 72 aa3.59□□□□□ -1.84
VTI1A-205ENST00000483122 SPRR2BP35325 72 aa3.59□□□□□ -1.84
VTI1A-205ENST00000483122 SPRR2AP35326 72 aa3.59□□□□□ -1.84
VTI1A-205ENST00000483122 MDN1Q9NU22 5596 aa3.58□□□□□ -1.84
VTI1A-205ENST00000483122 MT1MQ8N339 61 aa3.58□□□□□ -1.84
VTI1A-205ENST00000483122 LCE5AQ5TCM9 118 aa3.58□□□□□ -1.84
VTI1A-205ENST00000483122 LCE1AQ5T7P2 110 aa3.57□□□□□ -1.84
VTI1A-205ENST00000483122 KRTAP19-3Q7Z4W3 81 aa3.52□□□□□ -1.85
VTI1A-205ENST00000483122 SYNE1Q8NF91 8797 aaKnown RBP3.5□□□□□ -1.85
VTI1A-205ENST00000483122 PRM1P04553 51 aa3.46□□□□□ -1.85
VTI1A-205ENST00000483122 SPRR2DP22532 72 aa3.46□□□□□ -1.86
VTI1A-205ENST00000483122 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
VTI1A-205ENST00000483122 MT1AP04731 61 aa3.43□□□□□ -1.86
VTI1A-205ENST00000483122 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
VTI1A-205ENST00000483122 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
VTI1A-205ENST00000483122 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
VTI1A-205ENST00000483122 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
VTI1A-205ENST00000483122 KRTAP6-1Q3LI64 71 aa3.36□□□□□ -1.87
VTI1A-205ENST00000483122 HMCN1Q96RW7 5635 aa3.34□□□□□ -1.87
VTI1A-205ENST00000483122 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
VTI1A-205ENST00000483122 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
VTI1A-205ENST00000483122 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
VTI1A-205ENST00000483122 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
VTI1A-205ENST00000483122 MUC5BQ9HC84 5762 aaPredicted RBP3.2□□□□□ -1.9
VTI1A-205ENST00000483122 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
VTI1A-205ENST00000483122 MT4P47944 62 aa2.99□□□□□ -1.93
VTI1A-205ENST00000483122 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
VTI1A-205ENST00000483122 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
VTI1A-205ENST00000483122 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
VTI1A-205ENST00000483122 MT3P25713 68 aa2.88□□□□□ -1.95
VTI1A-205ENST00000483122 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
VTI1A-205ENST00000483122 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
VTI1A-205ENST00000483122 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
VTI1A-205ENST00000483122 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
VTI1A-205ENST00000483122 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
VTI1A-205ENST00000483122 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
VTI1A-205ENST00000483122 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
VTI1A-205ENST00000483122 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
VTI1A-205ENST00000483122 MUC5ACP98088 5654 aa2.56□□□□□ -2
VTI1A-205ENST00000483122 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
VTI1A-205ENST00000483122 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
VTI1A-205ENST00000483122 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
VTI1A-205ENST00000483122 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
VTI1A-205ENST00000483122 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
VTI1A-205ENST00000483122 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
VTI1A-205ENST00000483122 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
VTI1A-205ENST00000483122 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms